HomePISO0K13188g
weakly similar to uniprot|P33775 Saccharomyces cerevisiae SACE0D03300g PMT1_YEAST PMT1 YDL095W Protein O- mannosyltransferase transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues
Element type: CDS
Element length: 2226 nucleotides,
on anti-sense strand of
Piso0K: complement(1112280..1114505).
Other names:
GNLVRS01_PISO0K13188g
vPISO-ORF16487
Coding sequence: 742 codons.
Element length: 2226 nucleotides,
on anti-sense strand of
Piso0K: complement(1112280..1114505).
Other names:
GNLVRS01_PISO0K13188g
vPISO-ORF16487
Coding sequence: 742 codons.
Allele data
Allele name: Piso0_004270-1Homologs and Orthologs
Homologs in protein family: GL3R0043Orthologs: strict determination not possible; homologs must be refined manually
Protein PISO0K13188p 
weakly similar to uniprot|P33775 Saccharomyces cerevisiae SACE0D03300g PMT1_YEAST PMT1 YDL095W Protein O- mannosyltransferase transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues;
Protein domain map
Database cross references:
Computed results for PISO0K13188p
None available yet
Gene Ontology terms
None available yet
Sequence data
>PISO0K13188g.nt ATGTATAAAACTGGTCCAGTGCAAAAGGGGAGGTTACCCCCGGGGCGTAAGGTGAAGAAT GGAAAGGTTTATACGGAATCTGAGCCTTCACAGTGGATGTTGGAAACTAGTAGAATCTCG CGGTTGGATCATCTCTTGTTATTCTTATTGTTGGCAATTGGTATCGCTGTAAGGCTTTAC AACCTACCACTTCCAAGCGGTATAGTTTTCGACGAAATACACCTTGGTAACTTCATCGAT GAATACTATAAAGGAACATTTTTCATAGATGTGCATCCACCTTTGGGCAAGCTTCTTTAC TTTTGGATCGCATCTTTGCTTCACTGGGATGGGGAGTATCAGTTCAGCGACGTCAATGCT CCATACGACTCGGAATTCCCATATTTGTCCATGAGGATGTTCTCAGCCATATGTGGGATT ATTTCGATCTTGGCAACCTATGGGACGTTGAGAGCGTCTCTTTGTAGGCCGTTGGTCGCC TTTTTCGGAGCATACTTGGTTGCGATTGAGAATGCCAATATTACGTTGACGAGGCAGATG ATGCTTGAAGGACCTTTGATCCTCGGGATTTCATTGACGCTATACACACATAAGAAGTTT GAGCTTGCTAAGCCGTTTACCAAAAAGTGGTTCAAGTTCTTGATTTCAACGGGAATCTTC CTCGGTGTTCTCACTTCCATAAAACTCACAGGCCTTTTCACCTTCTTGTGGGTTGGCATA AATACTGCAGTTGAGTTATGGAGCATATTAGGAGACCTTGACGTGTCTTTAATCGATCTC TTCAAGCATATAATATACCGGGTTTTTGGATTGATCGTCATTCCAGCAACTATCTACCTT GGCTGTTTTGCGATACACTTTGTCAACCTTCCTTACAATGGAGGCGGATCTGGTGCCATA TCGCCTAGCTTCCAAGCTAGCCTCATGGATGCCGAAGACTTGACAAACATGCCAGTGGAA GTGTCATATGGCAGTACAGTTACAATTAAGCACAATGAATTGGAAAGTTACCTTCACTCT CATGACCACACATACAAAACTGGCTCAGGCGAACAGCAAGTAACATTATATGGATTTACA CCAGACGTGAATAATGAATGGATCATCGAGACCAAAAACAAGAATCGGATGGGCCTGCTT CAAGAGAAATTTAGACCAGTGAAAGATGGCGACACTGTGAGGTTCTACCATAAGGTGACT GGTAAGTACTTGCATGTAAACGACTTAAGACCGCCTTTGTCGGAGCATGACTATGCCAAC GAAGTATCATGCGCAGGAGATCGCGATATGTTAGGCGACATAAATTATGAGTTCAAAATC AGAATATTGTTAAAGAAGTCACATTCAAATCTGAGCTTACCGTTAATTAAACTTAGAGCC ACCGAAAGCGTCTTCCAGATACTTCACAGGGGAACTGAGTGCGTTCTCTTGGCTCACGAA GATCAGCTCCCTTCGTGGGGATTCTATCAGAATGAGGTGTTATGTATTGACGAGCCTACT ATCCCTAACTCACTTTGGTATATCGAACATAACTCCCACCCATTGCTTGACGACAATTAT GAATACGAAAGAGCACATTTCAAGAACATCACTTTCTGGGACAAGCTTACTGAATACCAC AAGGCTATGTGGAGAACCAATAAGGGTCTCAACGAGCCCCATTACTATTCCTCACAACCC GTCTCGTGGATGTTGACTCAGAGAGGAATTAGTCTCTACAATACTGAAGGTGATAGTCTT CCCTCTGAGGACAAAGGGAGACATATTTATTTACTCGGAAATCTTGCAATTTATTCGATA GGGTTGGCAATTACCGTCGTAATATTAATTAATAATTTTGTCCATGTTTTCAAAATAATG AATCCTTTCCAAGAAACACCAGAACAGCCGTACGAGTCGCTCTACTATAAAAACGGGTTT CTGCTTATTCTCGGATGGGCCTTGAATTACTTACCCTACTTCCTGATGTCAAGACAGTTG TTCTTACATCACTACTTGATTCCGTCGTACTTTTTGATTTTGGCCGTAGCGCTGTTTGCG GAATACCAGATAAGCAGAAGAAGAATATTAGGTTACGTCTTTGTAGCCGTTGTTTTGTTT TTCGCCACTGCCAACTTCTGGAAGCTTAGACATATCATATACGGGCTCGAATGGACCAAG GACGATTGTAATCATGCAAAATGGTTAGGTACCTGGGACTTTAACTGCGACAGTTATTCC CAATAA
>PISO0K13188g.cds ATGTATAAAACTGGTCCAGTGCAAAAGGGGAGGTTACCCCCGGGGCGTAAGGTGAAGAAT GGAAAGGTTTATACGGAATCTGAGCCTTCACAGTGGATGTTGGAAACTAGTAGAATCTCG CGGTTGGATCATCTCTTGTTATTCTTATTGTTGGCAATTGGTATCGCTGTAAGGCTTTAC AACCTACCACTTCCAAGCGGTATAGTTTTCGACGAAATACACCTTGGTAACTTCATCGAT GAATACTATAAAGGAACATTTTTCATAGATGTGCATCCACCTTTGGGCAAGCTTCTTTAC TTTTGGATCGCATCTTTGCTTCACTGGGATGGGGAGTATCAGTTCAGCGACGTCAATGCT CCATACGACTCGGAATTCCCATATTTGTCCATGAGGATGTTCTCAGCCATATGTGGGATT ATTTCGATCTTGGCAACCTATGGGACGTTGAGAGCGTCTCTTTGTAGGCCGTTGGTCGCC TTTTTCGGAGCATACTTGGTTGCGATTGAGAATGCCAATATTACGTTGACGAGGCAGATG ATGCTTGAAGGACCTTTGATCCTCGGGATTTCATTGACGCTATACACACATAAGAAGTTT GAGCTTGCTAAGCCGTTTACCAAAAAGTGGTTCAAGTTCTTGATTTCAACGGGAATCTTC CTCGGTGTTCTCACTTCCATAAAACTCACAGGCCTTTTCACCTTCTTGTGGGTTGGCATA AATACTGCAGTTGAGTTATGGAGCATATTAGGAGACCTTGACGTGTCTTTAATCGATCTC TTCAAGCATATAATATACCGGGTTTTTGGATTGATCGTCATTCCAGCAACTATCTACCTT GGCTGTTTTGCGATACACTTTGTCAACCTTCCTTACAATGGAGGCGGATCTGGTGCCATA TCGCCTAGCTTCCAAGCTAGCCTCATGGATGCCGAAGACTTGACAAACATGCCAGTGGAA GTGTCATATGGCAGTACAGTTACAATTAAGCACAATGAATTGGAAAGTTACCTTCACTCT CATGACCACACATACAAAACTGGCTCAGGCGAACAGCAAGTAACATTATATGGATTTACA CCAGACGTGAATAATGAATGGATCATCGAGACCAAAAACAAGAATCGGATGGGCCTGCTT CAAGAGAAATTTAGACCAGTGAAAGATGGCGACACTGTGAGGTTCTACCATAAGGTGACT GGTAAGTACTTGCATGTAAACGACTTAAGACCGCCTTTGTCGGAGCATGACTATGCCAAC GAAGTATCATGCGCAGGAGATCGCGATATGTTAGGCGACATAAATTATGAGTTCAAAATC AGAATATTGTTAAAGAAGTCACATTCAAATCTGAGCTTACCGTTAATTAAACTTAGAGCC ACCGAAAGCGTCTTCCAGATACTTCACAGGGGAACTGAGTGCGTTCTCTTGGCTCACGAA GATCAGCTCCCTTCGTGGGGATTCTATCAGAATGAGGTGTTATGTATTGACGAGCCTACT ATCCCTAACTCACTTTGGTATATCGAACATAACTCCCACCCATTGCTTGACGACAATTAT GAATACGAAAGAGCACATTTCAAGAACATCACTTTCTGGGACAAGCTTACTGAATACCAC AAGGCTATGTGGAGAACCAATAAGGGTCTCAACGAGCCCCATTACTATTCCTCACAACCC GTCTCGTGGATGTTGACTCAGAGAGGAATTAGTCTCTACAATACTGAAGGTGATAGTCTT CCCTCTGAGGACAAAGGGAGACATATTTATTTACTCGGAAATCTTGCAATTTATTCGATA GGGTTGGCAATTACCGTCGTAATATTAATTAATAATTTTGTCCATGTTTTCAAAATAATG AATCCTTTCCAAGAAACACCAGAACAGCCGTACGAGTCGCTCTACTATAAAAACGGGTTT CTGCTTATTCTCGGATGGGCCTTGAATTACTTACCCTACTTCCTGATGTCAAGACAGTTG TTCTTACATCACTACTTGATTCCGTCGTACTTTTTGATTTTGGCCGTAGCGCTGTTTGCG GAATACCAGATAAGCAGAAGAAGAATATTAGGTTACGTCTTTGTAGCCGTTGTTTTGTTT TTCGCCACTGCCAACTTCTGGAAGCTTAGACATATCATATACGGGCTCGAATGGACCAAG GACGATTGTAATCATGCAAAATGGTTAGGTACCTGGGACTTTAACTGCGACAGTTATTCC CAATAA
>PISO0K13188g.aa MYKTGPVQKGRLPPGRKVKNGKVYTESEPSQWMLETSRISRLDHLLLFLLLAIGIAVRLY NLPLPSGIVFDEIHLGNFIDEYYKGTFFIDVHPPLGKLLYFWIASLLHWDGEYQFSDVNA PYDSEFPYLSMRMFSAICGIISILATYGTLRASLCRPLVAFFGAYLVAIENANITLTRQM MLEGPLILGISLTLYTHKKFELAKPFTKKWFKFLISTGIFLGVLTSIKLTGLFTFLWVGI NTAVELWSILGDLDVSLIDLFKHIIYRVFGLIVIPATIYLGCFAIHFVNLPYNGGGSGAI SPSFQASLMDAEDLTNMPVEVSYGSTVTIKHNELESYLHSHDHTYKTGSGEQQVTLYGFT PDVNNEWIIETKNKNRMGLLQEKFRPVKDGDTVRFYHKVTGKYLHVNDLRPPLSEHDYAN EVSCAGDRDMLGDINYEFKIRILLKKSHSNLSLPLIKLRATESVFQILHRGTECVLLAHE DQLPSWGFYQNEVLCIDEPTIPNSLWYIEHNSHPLLDDNYEYERAHFKNITFWDKLTEYH KAMWRTNKGLNEPHYYSSQPVSWMLTQRGISLYNTEGDSLPSEDKGRHIYLLGNLAIYSI GLAITVVILINNFVHVFKIMNPFQETPEQPYESLYYKNGFLLILGWALNYLPYFLMSRQL FLHHYLIPSYFLILAVALFAEYQISRRRILGYVFVAVVLFFATANFWKLRHIIYGLEWTK DDCNHAKWLGTWDFNCDSYSQ*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://192.168.122.177/elt/PISO/PISO0K13188g