HomePISO0I15562g
similar to uniprot|P37303 Saccharomyces cerevisiae SACE0E00836g GLY1_YEAST GLY1 YEL046C Threonine aldolase catalyzes the cleavage of L- allo-threonine and L- threonine to glycine
Element type: CDS
Element length: 1104 nucleotides,
on anti-sense strand of
Piso0I: complement(1307571..1308674).
Other names:
GNLVRS01_PISO0I15562g
vPISO-ORF11693
Coding sequence: 368 codons.
Element length: 1104 nucleotides,
on anti-sense strand of
Piso0I: complement(1307571..1308674).
Other names:
GNLVRS01_PISO0I15562g
vPISO-ORF11693
Coding sequence: 368 codons.
Allele data
Allele name: Piso0_002685-1Homologs and Orthologs
Homologs in protein family: GL3R0527Orthologs: strict determination not possible; homologs must be refined manually
Protein PISO0I15562p 
similar to uniprot|P37303 Saccharomyces cerevisiae SACE0E00836g GLY1_YEAST GLY1 YEL046C Threonine aldolase catalyzes the cleavage of L- allo-threonine and L- threonine to glycine;
Protein domain map
Database cross references:
Computed results for PISO0I15562p
None available yet
Gene Ontology terms
None available yet
Sequence data
>PISO0I15562g.nt ATGGACTTAAGCAACTTCCTGGGGCCCAGCGAGGCACATAATGAGTTTAGAAGCGACACT TTTACTACACCTACTTTGTCAATGGTCCAGTCGCTCACCAGAGCAACGGTAGGAGACTCA GTATACAATGAAGACAATTCGACTCTTGAGTTAGAACAAAAGGTGGCAAACATAACTGGT AAAGAGGCCGGTTTATTCTGCGTGAGTGGGACACTCGCCAATCAGGTGGGAGTAAGAGTG AATTTGAAGCAGCCCCCGTACAACGTTCTTTGCGATTTTCGAGCGCACATCTACGTTCAC GAAGCAGGGGGCTTGGCCACCTTGTCGCAGGCCATGGTCCAGCCAATTGTGCCGAAAAAC GGAGTTCATCTTACACTAGATGATGATATTATACCCAATTACATTCCAGACGATGGTGAG ATCCATGCGGCCCCCACAAAACTCATATGTCTAGAAAACACCTTACATGGAATGATCTTT CCCCTTGACGAGATTGTCAAGATCGCTGCTTTTTGCAAGGAAAACGACGTGAAGCTACAC CTCGATGGGGCACGGTTGTTCAATGCGTCTGTAGAGACCGGAATTCTGATGAAGGAGTAC TGCTCCCACTTTGACACTGTTTCAATTTGTCTCTCGAAAACGCTAGGGGCACCTGTAGGA TCGGTTTTAGTTTCTGACGCGCAAGTAATAAAGAAGGCTAATCATTTCAGGAAACAAGCT GGTGGCGGCATTAGACAGTCTGGAATTTTAGCTACAATGGCTATTACAGCCATTGACGAA AACGTCAGCAAGTTAGGGGCCACTCACGAAAGAGCAAAAGAATTGGGAAAGCTATGTGAG AGTAACGGGATCATGCTTGCACACCCTGTCCAGACAAACTTTGTTTTCATTGACTTCGAC AAATCTCGGTTAGACGGCAAAATTTTTGACGAGTTACTGAAAAAGTACAATGTCAAACTG TATCCTGGCAGGATCTCGTTTCACTACCAGATATCGGACGAAAGCTTTGAGAATATCAAA AAAGTAGTTTTAGAATGCCTCCGGCTTTCAAAACAACAAGAATCTACAGCTGCTCCGAAA TCTGCTTTTTATCAATCAACATAA
>PISO0I15562g.cds ATGGACTTAAGCAACTTCCTGGGGCCCAGCGAGGCACATAATGAGTTTAGAAGCGACACT TTTACTACACCTACTTTGTCAATGGTCCAGTCGCTCACCAGAGCAACGGTAGGAGACTCA GTATACAATGAAGACAATTCGACTCTTGAGTTAGAACAAAAGGTGGCAAACATAACTGGT AAAGAGGCCGGTTTATTCTGCGTGAGTGGGACACTCGCCAATCAGGTGGGAGTAAGAGTG AATTTGAAGCAGCCCCCGTACAACGTTCTTTGCGATTTTCGAGCGCACATCTACGTTCAC GAAGCAGGGGGCTTGGCCACCTTGTCGCAGGCCATGGTCCAGCCAATTGTGCCGAAAAAC GGAGTTCATCTTACACTAGATGATGATATTATACCCAATTACATTCCAGACGATGGTGAG ATCCATGCGGCCCCCACAAAACTCATATGTCTAGAAAACACCTTACATGGAATGATCTTT CCCCTTGACGAGATTGTCAAGATCGCTGCTTTTTGCAAGGAAAACGACGTGAAGCTACAC CTCGATGGGGCACGGTTGTTCAATGCGTCTGTAGAGACCGGAATTCTGATGAAGGAGTAC TGCTCCCACTTTGACACTGTTTCAATTTGTCTCTCGAAAACGCTAGGGGCACCTGTAGGA TCGGTTTTAGTTTCTGACGCGCAAGTAATAAAGAAGGCTAATCATTTCAGGAAACAAGCT GGTGGCGGCATTAGACAGTCTGGAATTTTAGCTACAATGGCTATTACAGCCATTGACGAA AACGTCAGCAAGTTAGGGGCCACTCACGAAAGAGCAAAAGAATTGGGAAAGCTATGTGAG AGTAACGGGATCATGCTTGCACACCCTGTCCAGACAAACTTTGTTTTCATTGACTTCGAC AAATCTCGGTTAGACGGCAAAATTTTTGACGAGTTACTGAAAAAGTACAATGTCAAACTG TATCCTGGCAGGATCTCGTTTCACTACCAGATATCGGACGAAAGCTTTGAGAATATCAAA AAAGTAGTTTTAGAATGCCTCCGGCTTTCAAAACAACAAGAATCTACAGCTGCTCCGAAA TCTGCTTTTTATCAATCAACATAA
>PISO0I15562g.aa MDLSNFLGPSEAHNEFRSDTFTTPTLSMVQSLTRATVGDSVYNEDNSTLELEQKVANITG KEAGLFCVSGTLANQVGVRVNLKQPPYNVLCDFRAHIYVHEAGGLATLSQAMVQPIVPKN GVHLTLDDDIIPNYIPDDGEIHAAPTKLICLENTLHGMIFPLDEIVKIAAFCKENDVKLH LDGARLFNASVETGILMKEYCSHFDTVSICLSKTLGAPVGSVLVSDAQVIKKANHFRKQA GGGIRQSGILATMAITAIDENVSKLGATHERAKELGKLCESNGIMLAHPVQTNFVFIDFD KSRLDGKIFDELLKKYNVKLYPGRISFHYQISDESFENIKKVVLECLRLSKQQESTAAPK SAFYQST*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://192.168.122.177/elt/PISO/PISO0I15562g