HomePISO0C11574g
similar to uniprot|P00927 Saccharomyces cerevisiae SACE0E04114g THDH_YEAST ILV1 ISO1 YER086W Threonine deaminase catalyzes the first step in isoleucine biosynthesis
Element type: CDS
Element length: 1734 nucleotides,
on sense strand of
Piso0C: 966821..968554.
Other names:
GNLVRS01_PISO0C11574g
vPISO-ORF03111
Coding sequence: 578 codons.
Element length: 1734 nucleotides,
on sense strand of
Piso0C: 966821..968554.
Other names:
GNLVRS01_PISO0C11574g
vPISO-ORF03111
Coding sequence: 578 codons.
Allele data
Allele name: Piso0_001131-1Homologs and Orthologs
Homologs in protein family: GL3C0161Orthologs: strict determination not possible; homologs must be refined manually
Protein PISO0C11574p 
similar to uniprot|P00927 Saccharomyces cerevisiae SACE0E04114g THDH_YEAST ILV1 ISO1 YER086W Threonine deaminase catalyzes the first step in isoleucine biosynthesis;
Protein domain map
Database cross references:
Computed results for PISO0C11574p
None available yet
Gene Ontology terms
None available yet
Sequence data
>PISO0C11574g.nt ATGCTATTGCTTGGAAAACCAAGCTTATCTGCTGCTTGGAGCGGTCTTGTGAGACACAGC TACCCGAGGTTGCGTAATTGCGCAAAGTTAAGTGTAAGATATGAGACCAACAAAACTTTC AACAGAGAAAAGTATCCGGATTTAGCTGACGATGATTTTTTGGAGGATGGACTGCCAGAC TATATTAAGTTGATATTGACGTCCAGAGTCTATGATGTTGTTGATAGTGCCGGTTCGCCC CTTACTCATGCGGTTAATTTGTCACAAAAGTGTAACACCAACGTGTATTTGAAAAGAGAA GACTTGCTTCCAGTATTTTCGTTTAAACTCAGAGGAGCATATAATATGATTAGTCATTTG CATGCAAAAGAGAAGTCCAAGTTGGCGGGTGTTATTGCATGTTCGGCAGGAAACCATGCT CAAGGTGTTGCTTACTCTGCTAACAAATTAAAGATACCATCCACCATCGTGATGCCTACG GCAACTCCATCTATAAAGTACACGAATGTTTCTCGTCTTGGGTCTCAGGTTGTTCTTTAC GGTGAAGACTTCGATTCCGCAAAGAAAGAATGCGACCGGTTGAGTCTTCTCCGTAACTTG ACCAATATTCCACCTTTTAATCATCCATATGTCATTGCAGGACAAGGTACTATAGCTTTG GAAATTACTAGACAGCTTCAGATAGATTCCTTGGATGCAATTTTTATTCCCGTTGGAGGC GGTGGCCTTATCGCAGGGCTTGCCATGTACATAAAAAAGATTGCACCAGCTGTGAAAATA ATTGGTGTTGAAACTTATGATGCGGACGCTTTATACCAGTCATTAAAATCCTCAAGAATG GAAAGATTAGATCAGGTTGGTGGGTTTGCTGACGGAACTGCTGTCAAGGTTTTGGGAGAG GAAACATGGAGAATCTGTAAAGATCATGTAGATGAGGTCGTGAGAGTTCTGACAGACGAA CTCTGTGCTGCGATTAAGGATATCTTCGAAGATACCAGACTGATTGTCGAGCCATCTGGT GCCTTAGGTGTAGCTGGTCTCAAGAAATACGTCAAACAGAACCCTGAAATTAACCACGGT AGCCGCACCTACGTTCCTATTTTAAGTGGAGCGAACATGAACTTTGATAGGTTGAGATTT GTCTCCGAGAGAGCTGTCCTTGGTGAAGGAAAAGAGCTGTCATTAGTTGTCATGATTCCT GAAAAGCCCGGTGAATTTGCTAGGTTGCAGGACATTATTAATCCTAGAGCTGTGACTGAG TTTTCTTACAGATACAACGGCACTGATGAAGCTCATATATTTGTAAGCTTTAACATCATT AACAAGGAAAAGGAGTTGTCTTCAATCATCAACACCATGATTAACCAAAATAATTATGAG GTATTCGATGTTTCTGATGACGAACTTGCAAAGACACATGGCCGTTACTTGGTAGGAGGA ACTCCTCCTGCTGACCACATCCGTGATTTAGCTAGAGAAAAGATATACAGATTCGAATTT CCAGAAAAACCAGGGGCTTTGACAAACTTTTTGAAAGCTTTGAGGAAAGATTGGGACATT ACATTATTTCATTATAGGAACCATGGACATGATATTGGTAAGATACTTTGTGGATTCTTA CTCCCAGAGAACACTTCAGAAGAAGAATTTCATAGCGTATTGAATGAGTTGGGTTATAGA TTCATCGATGAGACTGACAACATTTTCTACAAAAAGTTCTTAATGAATAGTTAA
>PISO0C11574g.cds ATGCTATTGCTTGGAAAACCAAGCTTATCTGCTGCTTGGAGCGGTCTTGTGAGACACAGC TACCCGAGGTTGCGTAATTGCGCAAAGTTAAGTGTAAGATATGAGACCAACAAAACTTTC AACAGAGAAAAGTATCCGGATTTAGCTGACGATGATTTTTTGGAGGATGGACTGCCAGAC TATATTAAGTTGATATTGACGTCCAGAGTCTATGATGTTGTTGATAGTGCCGGTTCGCCC CTTACTCATGCGGTTAATTTGTCACAAAAGTGTAACACCAACGTGTATTTGAAAAGAGAA GACTTGCTTCCAGTATTTTCGTTTAAACTCAGAGGAGCATATAATATGATTAGTCATTTG CATGCAAAAGAGAAGTCCAAGTTGGCGGGTGTTATTGCATGTTCGGCAGGAAACCATGCT CAAGGTGTTGCTTACTCTGCTAACAAATTAAAGATACCATCCACCATCGTGATGCCTACG GCAACTCCATCTATAAAGTACACGAATGTTTCTCGTCTTGGGTCTCAGGTTGTTCTTTAC GGTGAAGACTTCGATTCCGCAAAGAAAGAATGCGACCGGTTGAGTCTTCTCCGTAACTTG ACCAATATTCCACCTTTTAATCATCCATATGTCATTGCAGGACAAGGTACTATAGCTTTG GAAATTACTAGACAGCTTCAGATAGATTCCTTGGATGCAATTTTTATTCCCGTTGGAGGC GGTGGCCTTATCGCAGGGCTTGCCATGTACATAAAAAAGATTGCACCAGCTGTGAAAATA ATTGGTGTTGAAACTTATGATGCGGACGCTTTATACCAGTCATTAAAATCCTCAAGAATG GAAAGATTAGATCAGGTTGGTGGGTTTGCTGACGGAACTGCTGTCAAGGTTTTGGGAGAG GAAACATGGAGAATCTGTAAAGATCATGTAGATGAGGTCGTGAGAGTTCTGACAGACGAA CTCTGTGCTGCGATTAAGGATATCTTCGAAGATACCAGACTGATTGTCGAGCCATCTGGT GCCTTAGGTGTAGCTGGTCTCAAGAAATACGTCAAACAGAACCCTGAAATTAACCACGGT AGCCGCACCTACGTTCCTATTTTAAGTGGAGCGAACATGAACTTTGATAGGTTGAGATTT GTCTCCGAGAGAGCTGTCCTTGGTGAAGGAAAAGAGCTGTCATTAGTTGTCATGATTCCT GAAAAGCCCGGTGAATTTGCTAGGTTGCAGGACATTATTAATCCTAGAGCTGTGACTGAG TTTTCTTACAGATACAACGGCACTGATGAAGCTCATATATTTGTAAGCTTTAACATCATT AACAAGGAAAAGGAGTTGTCTTCAATCATCAACACCATGATTAACCAAAATAATTATGAG GTATTCGATGTTTCTGATGACGAACTTGCAAAGACACATGGCCGTTACTTGGTAGGAGGA ACTCCTCCTGCTGACCACATCCGTGATTTAGCTAGAGAAAAGATATACAGATTCGAATTT CCAGAAAAACCAGGGGCTTTGACAAACTTTTTGAAAGCTTTGAGGAAAGATTGGGACATT ACATTATTTCATTATAGGAACCATGGACATGATATTGGTAAGATACTTTGTGGATTCTTA CTCCCAGAGAACACTTCAGAAGAAGAATTTCATAGCGTATTGAATGAGTTGGGTTATAGA TTCATCGATGAGACTGACAACATTTTCTACAAAAAGTTCTTAATGAATAGTTAA
>PISO0C11574g.aa MLLLGKPSLSAAWSGLVRHSYPRLRNCAKLSVRYETNKTFNREKYPDLADDDFLEDGLPD YIKLILTSRVYDVVDSAGSPLTHAVNLSQKCNTNVYLKREDLLPVFSFKLRGAYNMISHL HAKEKSKLAGVIACSAGNHAQGVAYSANKLKIPSTIVMPTATPSIKYTNVSRLGSQVVLY GEDFDSAKKECDRLSLLRNLTNIPPFNHPYVIAGQGTIALEITRQLQIDSLDAIFIPVGG GGLIAGLAMYIKKIAPAVKIIGVETYDADALYQSLKSSRMERLDQVGGFADGTAVKVLGE ETWRICKDHVDEVVRVLTDELCAAIKDIFEDTRLIVEPSGALGVAGLKKYVKQNPEINHG SRTYVPILSGANMNFDRLRFVSERAVLGEGKELSLVVMIPEKPGEFARLQDIINPRAVTE FSYRYNGTDEAHIFVSFNIINKEKELSSIINTMINQNNYEVFDVSDDELAKTHGRYLVGG TPPADHIRDLAREKIYRFEFPEKPGALTNFLKALRKDWDITLFHYRNHGHDIGKILCGFL LPENTSEEEFHSVLNELGYRFIDETDNIFYKKFLMNS*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://192.168.122.177/elt/PISO/PISO0C11574p