HomePISO0A08030g
similar to uniprot|P40416 Saccharomyces cerevisiae SACE0M10274g ATM1_YEAST ATM1 YMR301C Mitochondrial inner membrane ATP-binding cassette (ABC) transporter exports mitochondrially synthesized precursors of iron- sulfur (Fe/S) clusters to the cytosol
Element type: CDS
Element length: 2130 nucleotides,
on anti-sense strand of
Piso0A: complement(654418..656547).
Other names:
GNLVRS01_PISO0A08030g
vPISO-ORF00912
Coding sequence: 710 codons.
Element length: 2130 nucleotides,
on anti-sense strand of
Piso0A: complement(654418..656547).
Other names:
GNLVRS01_PISO0A08030g
vPISO-ORF00912
Coding sequence: 710 codons.
Allele data
Allele name: Piso0_000378-1Homologs and Orthologs
Homologs in protein family: GL3C0060Orthologs: strict determination not possible; homologs must be refined manually
Protein PISO0A08030p 
Protein domain map
Database cross references:
Computed results for PISO0A08030p
None available yet
Gene Ontology terms
None available yet
Sequence data
>PISO0A08030g.nt ATGTTGTGGTCCTATGGTAGTAGGTTGATTGTGCCCCATGCGAGCTGTGTGAAACAATTA GTTGGTAAACGGACATTCTTCTCACAATCAATTGAAAAAACCTTGAAAAATGGGATCAAT AGGTATAATACGTATGAGAGAATCAACAGTTGTGCCCCCCTAAGCAGATGGCTGTGGAAA GGAAGAAGAAGCCTCTATCTGTCTCCTATAGTGGCCGATGCCGCAAAGCAAGAACAAACC TACAAATCTATTCTAGGACGACAAATATCGTCCTCTGAGCTGCGCATGATCAAATCGTTG CTCCAAACTCTATGGCCAAAGGAAAACTGGGGTTTCAAGATTAGAGTTATAGTGGCTTTG TCTTTGTTGGTTGCTTCCAAGCTTCTCACGGTGGAGGTTCCCTTTTTTTTCAAAAAGATC GTCGATGAGATGAATATCGACTGGGCACAGGAAGCTGGTACCGTCGGAACTGTAGTGGGG GCTACGATTCTAGCCTACGGTGGTGCTAGATTTGGTGCAGTCTTATTTGGAGAGTTGCGT AATGCCATATTTGCCTCCGTGGCTCAATCTGCCATCAAACGAGTGGCACGAAACACCTTT ATGCATTTGCTCAACATGGACTTAAACTTTCATTTATCAAAGCAAACTGGTGGCCTCACC AGGGCAATAGAGAGAGGAACAAAAGGTATTTCTTATGTTTTAAGTGCTATGGTGTTCCAC ATTATACCGGTTTCCCTTGAAATTTCAATCGTCTGTGGTATCTTGAGTTACAACTACGGT ACCAGCTTTGCTGCAGTAACTTTTGCAACTATGCTCGCCTATTCTATATTTACCATTAAA ACTACTGCTTGGAGAACAAGGTTCAGAAGGCAGGCCAATAATGCCGATAATCAAGCTGCC ACTGTAGCTTTGGACTCTCTTTTAAACTACGAGTCAGTGAAGTACTTCAACAACGAAGCA TATCAGACTGCAAAATACGATAAAGCACTCACGAAATACCAAGATGCGCTGATCCAAGTC TCGACTTCTTTAGCATATTTGAATTCTGGTCAGAACTTGATTTTTACTACAGCGTTGACG GCAATGATGTGCATGGGTTGTAACGGAATAGTTACGGGTACCCTCAGCGTTGGAGATCTC GTTCTTATTAACCAGTTAGTATTTCAACTTTCGGTTCCCTTAAACTTTTTAGGATCCGTT TACCGTGAATTGAAACAGTCCTTATTAGACATGGAAAACTTATTTCAACTCCAAAATCAA GAAATAAAAATTAAAGACCACCCTGACGCGAAACCACTTAAGCTTAATAATTCTGCAACC CCTGGTGAAATAAGATTCGAAAACGTGACATTTGGATACCACCCTGATAGACCTATCCTC AAAAACACTTCCTTTACGATTTCGGCGGGCCAGAAAGTCGCTATCGTTGGTCCATCTGGG AGCGGTAAATCAACAATCTTGAGATTACTTTTCAGATTCTACGATATTGAGGATGGACAT ATATACATTGACGGTCAAGACATTTCCAAAGTTACGTTGGATTCTTTAAGAAGAGCAATT GGGATTGTACCTCAAGACACACCATTATTTAATGAAACTATCAAAGAAAATATAAAATAT GGTAAGCTTGATGCGACTGATGAAGAGGTATACAAAATGATTGACGACGTGCAGTTACAT AAGTTGATTACAGATCTTCCTGATGGTCTCGATACTATCGTGGGTGAAAGAGGAATGATG ATCTCCGGTGGTGAAAAGCAAAGGTTAGCCATTGCAAGATTATTATTGAAAAATGCCCCT ATTACGTTCTTCGATGAGGCTACATCTGCTTTGGATACACACACTGAGCAAGCCTTGCTC AAAACAATAAAAGCTATCTTCGAAGAAAGAAAGAATACAAACGTTGCCATCGCTCATAGG CTCAGAACGATAGCAGATGCTGATAAGATAATAGTATTGGATGGCGGATCGGTACGTGAG GAGGGTAGTCACTATCAGTTATTACAAGACCCCGATACCTTATATTCAAAATTGTGGAAC CTCCAAGAAAATTTAGACGTGGAATCCCAATTGAATGAGGGTGATAAGGGCAAAGAAGGT GAAGAAAAAGAACAGGATGTGAATACGTAG
>PISO0A08030g.cds ATGTTGTGGTCCTATGGTAGTAGGTTGATTGTGCCCCATGCGAGCTGTGTGAAACAATTA GTTGGTAAACGGACATTCTTCTCACAATCAATTGAAAAAACCTTGAAAAATGGGATCAAT AGGTATAATACGTATGAGAGAATCAACAGTTGTGCCCCCCTAAGCAGATGGCTGTGGAAA GGAAGAAGAAGCCTCTATCTGTCTCCTATAGTGGCCGATGCCGCAAAGCAAGAACAAACC TACAAATCTATTCTAGGACGACAAATATCGTCCTCTGAGCTGCGCATGATCAAATCGTTG CTCCAAACTCTATGGCCAAAGGAAAACTGGGGTTTCAAGATTAGAGTTATAGTGGCTTTG TCTTTGTTGGTTGCTTCCAAGCTTCTCACGGTGGAGGTTCCCTTTTTTTTCAAAAAGATC GTCGATGAGATGAATATCGACTGGGCACAGGAAGCTGGTACCGTCGGAACTGTAGTGGGG GCTACGATTCTAGCCTACGGTGGTGCTAGATTTGGTGCAGTCTTATTTGGAGAGTTGCGT AATGCCATATTTGCCTCCGTGGCTCAATCTGCCATCAAACGAGTGGCACGAAACACCTTT ATGCATTTGCTCAACATGGACTTAAACTTTCATTTATCAAAGCAAACTGGTGGCCTCACC AGGGCAATAGAGAGAGGAACAAAAGGTATTTCTTATGTTTTAAGTGCTATGGTGTTCCAC ATTATACCGGTTTCCCTTGAAATTTCAATCGTCTGTGGTATCTTGAGTTACAACTACGGT ACCAGCTTTGCTGCAGTAACTTTTGCAACTATGCTCGCCTATTCTATATTTACCATTAAA ACTACTGCTTGGAGAACAAGGTTCAGAAGGCAGGCCAATAATGCCGATAATCAAGCTGCC ACTGTAGCTTTGGACTCTCTTTTAAACTACGAGTCAGTGAAGTACTTCAACAACGAAGCA TATCAGACTGCAAAATACGATAAAGCACTCACGAAATACCAAGATGCGCTGATCCAAGTC TCGACTTCTTTAGCATATTTGAATTCTGGTCAGAACTTGATTTTTACTACAGCGTTGACG GCAATGATGTGCATGGGTTGTAACGGAATAGTTACGGGTACCCTCAGCGTTGGAGATCTC GTTCTTATTAACCAGTTAGTATTTCAACTTTCGGTTCCCTTAAACTTTTTAGGATCCGTT TACCGTGAATTGAAACAGTCCTTATTAGACATGGAAAACTTATTTCAACTCCAAAATCAA GAAATAAAAATTAAAGACCACCCTGACGCGAAACCACTTAAGCTTAATAATTCTGCAACC CCTGGTGAAATAAGATTCGAAAACGTGACATTTGGATACCACCCTGATAGACCTATCCTC AAAAACACTTCCTTTACGATTTCGGCGGGCCAGAAAGTCGCTATCGTTGGTCCATCTGGG AGCGGTAAATCAACAATCTTGAGATTACTTTTCAGATTCTACGATATTGAGGATGGACAT ATATACATTGACGGTCAAGACATTTCCAAAGTTACGTTGGATTCTTTAAGAAGAGCAATT GGGATTGTACCTCAAGACACACCATTATTTAATGAAACTATCAAAGAAAATATAAAATAT GGTAAGCTTGATGCGACTGATGAAGAGGTATACAAAATGATTGACGACGTGCAGTTACAT AAGTTGATTACAGATCTTCCTGATGGTCTCGATACTATCGTGGGTGAAAGAGGAATGATG ATCTCCGGTGGTGAAAAGCAAAGGTTAGCCATTGCAAGATTATTATTGAAAAATGCCCCT ATTACGTTCTTCGATGAGGCTACATCTGCTTTGGATACACACACTGAGCAAGCCTTGCTC AAAACAATAAAAGCTATCTTCGAAGAAAGAAAGAATACAAACGTTGCCATCGCTCATAGG CTCAGAACGATAGCAGATGCTGATAAGATAATAGTATTGGATGGCGGATCGGTACGTGAG GAGGGTAGTCACTATCAGTTATTACAAGACCCCGATACCTTATATTCAAAATTGTGGAAC CTCCAAGAAAATTTAGACGTGGAATCCCAATTGAATGAGGGTGATAAGGGCAAAGAAGGT GAAGAAAAAGAACAGGATGTGAATACGTAG
>PISO0A08030g.aa MLWSYGSRLIVPHASCVKQLVGKRTFFSQSIEKTLKNGINRYNTYERINSCAPLSRWLWK GRRSLYLSPIVADAAKQEQTYKSILGRQISSSELRMIKSLLQTLWPKENWGFKIRVIVAL SLLVASKLLTVEVPFFFKKIVDEMNIDWAQEAGTVGTVVGATILAYGGARFGAVLFGELR NAIFASVAQSAIKRVARNTFMHLLNMDLNFHLSKQTGGLTRAIERGTKGISYVLSAMVFH IIPVSLEISIVCGILSYNYGTSFAAVTFATMLAYSIFTIKTTAWRTRFRRQANNADNQAA TVALDSLLNYESVKYFNNEAYQTAKYDKALTKYQDALIQVSTSLAYLNSGQNLIFTTALT AMMCMGCNGIVTGTLSVGDLVLINQLVFQLSVPLNFLGSVYRELKQSLLDMENLFQLQNQ EIKIKDHPDAKPLKLNNSATPGEIRFENVTFGYHPDRPILKNTSFTISAGQKVAIVGPSG SGKSTILRLLFRFYDIEDGHIYIDGQDISKVTLDSLRRAIGIVPQDTPLFNETIKENIKY GKLDATDEEVYKMIDDVQLHKLITDLPDGLDTIVGERGMMISGGEKQRLAIARLLLKNAP ITFFDEATSALDTHTEQALLKTIKAIFEERKNTNVAIAHRLRTIADADKIIVLDGGSVRE EGSHYQLLQDPDTLYSKLWNLQENLDVESQLNEGDKGKEGEEKEQDVNT*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://192.168.122.177/elt/PISO/PISO0A08030g