HomeKLTH0G01914g
similar to uniprot|P13711 Saccharomyces cerevisiae YGL205W POX1 Fatty-acyl coenzyme A oxidase involved in the fatty acid beta-oxidation pathway localized to the peroxisomal matrix
Element type: CDS
Element length: 2217 nucleotides,
on sense strand of
Klth0G: 148464..150680.
Other names:
KLTH-ORF4880
Coding sequence: 739 codons.
Element length: 2217 nucleotides,
on sense strand of
Klth0G: 148464..150680.
Other names:
KLTH-ORF4880
Coding sequence: 739 codons.
Database cross references:
EMBL: CU928171
GeneID: 8293383
GenomeReviews: CU928171_GR
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CU928171
GeneID: 8293383
GenomeReviews: CU928171_GR
Homologs and Orthologs
Homologs in protein family: GL3C0456Orthologs: strict determination not possible; homologs must be refined manually
Protein KLTH0G01914p 
similar to uniprot|P13711 Saccharomyces cerevisiae YGL205W POX1 Fatty-acyl coenzyme A oxidase involved in the fatty acid beta-oxidation pathway localized to the peroxisomal matrix; RecName: Full=Acyl-coenzyme A oxidase;
Protein domain map
Database cross references:
Gene3D: G3DSA:1.10.540.10
Gene3D: G3DSA:1.20.140.10
Gene3D: G3DSA:2.40.110.10
InterPro: IPR002655
InterPro: IPR006091
InterPro: IPR009075
InterPro: IPR009100
InterPro: IPR012258
InterPro: IPR013764
InterPro: IPR013786
KEGG: lth:KLTH0G01914g
PIRSF: PIRSF000168
Pfam: PF01756
Pfam: PF02770
RefSeq: XP_002555125.1
UniProtKB/TrEMBL: C5DLM7
UniProtKB: C5DLM7_LACTC
Phylogeny
PhylomeDB:KLTH0G01914g
Gene3D: G3DSA:1.10.540.10
Gene3D: G3DSA:1.20.140.10
Gene3D: G3DSA:2.40.110.10
InterPro: IPR002655
InterPro: IPR006091
InterPro: IPR009075
InterPro: IPR009100
InterPro: IPR012258
InterPro: IPR013764
InterPro: IPR013786
KEGG: lth:KLTH0G01914g
PIRSF: PIRSF000168
Pfam: PF01756
Pfam: PF02770
RefSeq: XP_002555125.1
UniProtKB/TrEMBL: C5DLM7
UniProtKB: C5DLM7_LACTC
Phylogeny
PhylomeDB:KLTH0G01914gGene Ontology terms
Sequence data
>KLTH0G01914g.nt ATGACGAGGATCACAACGAATGAATTCAGCGGCCCGACGTTCAAGCCACAGGCTTTTATC CAGCACGAAAGACGCGAGTCTCAGCTCAACATAGATGCGGTGAATGTTTTCCTGGAGTCT GACCCTGCTAACGCACAGCTTACGCACGACCTGGTCACGGAGGTGACCATGGATCCCGTG CTTAAAACTGGCAGCGAGTATTACGACATGAGTAAGGACCAGCATCGCAGAGCAACCGCG CTCAAGATTGCTAAGATGGCCGTGTACTTGGAGCAGGACATAAAGCGGGCCGCCCGTAAT TACCGTGGCGGCGCAGTGGAGAAGTTTCAGACTAGTGACAAGACGCCTATTCTGACTGCA CAGGACCTCGCAATCTTTGACAAAAGACTTTCTATCATCTCGAACCAGGACCCACAGCTA GGAACCAGGATTGGTGTTCATCTCGGTCTTTTCGGCAACTGCATCCGCGGTAACGGCACC AACGAGCAAATCCGCTATTGGCTCCAGGAGAAGGGTGCGCTGTTCCTGAAAGGCATATAC GGTTGTTTCGCTATGACTGAGCTGGGCCACGGCTCCAACGTTGCGCAGCTTCAGACCCGC GCTGAGTACAACATTCAGACAGACACGTTTTTAATAAATACGCCAAATCTGCCCGCGACC AAGTGGTGGATTGGTGGTGCAGCGCACTCTGCAACCCATGCCACTGTGTACGCGCGTCTT ATCGTCAAGGGCAAAGACTACGGTGTCAAGACCTTTGTTGTCCCTCTCAGGGACCCGGGC ACATTCCAGCTTTTGCCCGGAGTTTTCATCGGTGACATTGGCACCAAGATGGGTCGCGAC GGCATTGACAACGGATGGATCCAGTTCAAAAATGTTGTCATTCCTCGCGAGTTTATGCTC TGCAGGTTTACAAAGGTGATCAGGTCTGAGCAAGGCGACGACGCAAAGGTGTGGTCTGAG CCCACTCTGGACCAAATATCAGGCTACAGCGCCCTTTTGAACGGCCGAGTCAACATGGTA ATGGATTCTTTCAGGTTTGGAGCCAAGTTTGTGACCATTGCAGTACGCTACGCAGTGGGA CGGCAACAATTTGCTCCCGCAGGCGACAAAACTGGAAAAGCAGAGGAAACTCAATTAATA AACTATCCTTTGCATCAGTATCGCGTGCTGCCACATCTGGCAGTTGTTTACTTGATTTCG CCGGTTGCGTTCAACCTCATGGCCACATATCATTCAACCTTGGACCAGCTTTTCAAGGCG TCGTCTTCGGGCGACAAGAAACAGCTAGGGCCTGTGAGCTTGAAGCTGAAAGACTTATTT ATCGATAGCGCCAGTTTGAAAGCTACCAATACATGGCTGGTAGCCACGGCAATCGATGAA TTGCGGCAAGCATGTGGCGGTTTAGGCTATTCGGCATATAACGGGTTCGGCAAGGGCTTC AGTGATTGGGTTGTTCAGTGCACATGGGAAGGCGACAACAGTATCCTGTCGCTGACTTCC GCCAGAAGCATCCTCAAGAAATTCACAGACCTCTCCAAGGGCAAAGTACAGGAATCGCAG TCGTTCAAGTACTTGTCGCCCAGCTTTGTCACTCAGGTATTGAGAGGCTCTAAGAGCGCC CAGATTCGGTCTCTCGAGGACTATATTGAGGTTTGGGGGATCATGCTTGTCAAGATATTA CACTACTGCGTCGATCTTGTTTCTAAGACCAAGAACACGGACTCTATCTCTAAACACCTC ATCATGATCTCGCGGTTCCATGCCTTCCACACCATGCTTCAGGCTTACTACGAGAAGCTC AAATCCCCCGAAGACTCGCATGTTTCCGATCAGGAATCCCAAAAGATGCTATGGAATCTG TTCCGTCTCTTTTCGCTTTACTTCATTGACAAGCACTCGGGCGAGTTCCTGCAATTCAAG GTGTTTACCCCAGACCAGATCCAGACCATTGTGCAACCCCAGCTGCTAGCTCTTCTCCCA GAAATCCGCAAAGAGTGTATCGCCCTCACTGACGCCTTTAAATTGCCAGATGCGATGTTG AACGCTCCTATTGGTTACTATGACGGTGACATTTACAATAACTACTACGCGGAGGTGCTC AAGAACAATCCACCAGAGGCTCCTGGTCCAGGCAAGCCCAACTATCACGAGGTCCTTACC ACGATGCTCCGGAGGGATTACGAACCCGAGGAAAATCTTGCAAAGCTGGGGAAGTAA
>KLTH0G01914g.cds ATGACGAGGATCACAACGAATGAATTCAGCGGCCCGACGTTCAAGCCACAGGCTTTTATC CAGCACGAAAGACGCGAGTCTCAGCTCAACATAGATGCGGTGAATGTTTTCCTGGAGTCT GACCCTGCTAACGCACAGCTTACGCACGACCTGGTCACGGAGGTGACCATGGATCCCGTG CTTAAAACTGGCAGCGAGTATTACGACATGAGTAAGGACCAGCATCGCAGAGCAACCGCG CTCAAGATTGCTAAGATGGCCGTGTACTTGGAGCAGGACATAAAGCGGGCCGCCCGTAAT TACCGTGGCGGCGCAGTGGAGAAGTTTCAGACTAGTGACAAGACGCCTATTCTGACTGCA CAGGACCTCGCAATCTTTGACAAAAGACTTTCTATCATCTCGAACCAGGACCCACAGCTA GGAACCAGGATTGGTGTTCATCTCGGTCTTTTCGGCAACTGCATCCGCGGTAACGGCACC AACGAGCAAATCCGCTATTGGCTCCAGGAGAAGGGTGCGCTGTTCCTGAAAGGCATATAC GGTTGTTTCGCTATGACTGAGCTGGGCCACGGCTCCAACGTTGCGCAGCTTCAGACCCGC GCTGAGTACAACATTCAGACAGACACGTTTTTAATAAATACGCCAAATCTGCCCGCGACC AAGTGGTGGATTGGTGGTGCAGCGCACTCTGCAACCCATGCCACTGTGTACGCGCGTCTT ATCGTCAAGGGCAAAGACTACGGTGTCAAGACCTTTGTTGTCCCTCTCAGGGACCCGGGC ACATTCCAGCTTTTGCCCGGAGTTTTCATCGGTGACATTGGCACCAAGATGGGTCGCGAC GGCATTGACAACGGATGGATCCAGTTCAAAAATGTTGTCATTCCTCGCGAGTTTATGCTC TGCAGGTTTACAAAGGTGATCAGGTCTGAGCAAGGCGACGACGCAAAGGTGTGGTCTGAG CCCACTCTGGACCAAATATCAGGCTACAGCGCCCTTTTGAACGGCCGAGTCAACATGGTA ATGGATTCTTTCAGGTTTGGAGCCAAGTTTGTGACCATTGCAGTACGCTACGCAGTGGGA CGGCAACAATTTGCTCCCGCAGGCGACAAAACTGGAAAAGCAGAGGAAACTCAATTAATA AACTATCCTTTGCATCAGTATCGCGTGCTGCCACATCTGGCAGTTGTTTACTTGATTTCG CCGGTTGCGTTCAACCTCATGGCCACATATCATTCAACCTTGGACCAGCTTTTCAAGGCG TCGTCTTCGGGCGACAAGAAACAGCTAGGGCCTGTGAGCTTGAAGCTGAAAGACTTATTT ATCGATAGCGCCAGTTTGAAAGCTACCAATACATGGCTGGTAGCCACGGCAATCGATGAA TTGCGGCAAGCATGTGGCGGTTTAGGCTATTCGGCATATAACGGGTTCGGCAAGGGCTTC AGTGATTGGGTTGTTCAGTGCACATGGGAAGGCGACAACAGTATCCTGTCGCTGACTTCC GCCAGAAGCATCCTCAAGAAATTCACAGACCTCTCCAAGGGCAAAGTACAGGAATCGCAG TCGTTCAAGTACTTGTCGCCCAGCTTTGTCACTCAGGTATTGAGAGGCTCTAAGAGCGCC CAGATTCGGTCTCTCGAGGACTATATTGAGGTTTGGGGGATCATGCTTGTCAAGATATTA CACTACTGCGTCGATCTTGTTTCTAAGACCAAGAACACGGACTCTATCTCTAAACACCTC ATCATGATCTCGCGGTTCCATGCCTTCCACACCATGCTTCAGGCTTACTACGAGAAGCTC AAATCCCCCGAAGACTCGCATGTTTCCGATCAGGAATCCCAAAAGATGCTATGGAATCTG TTCCGTCTCTTTTCGCTTTACTTCATTGACAAGCACTCGGGCGAGTTCCTGCAATTCAAG GTGTTTACCCCAGACCAGATCCAGACCATTGTGCAACCCCAGCTGCTAGCTCTTCTCCCA GAAATCCGCAAAGAGTGTATCGCCCTCACTGACGCCTTTAAATTGCCAGATGCGATGTTG AACGCTCCTATTGGTTACTATGACGGTGACATTTACAATAACTACTACGCGGAGGTGCTC AAGAACAATCCACCAGAGGCTCCTGGTCCAGGCAAGCCCAACTATCACGAGGTCCTTACC ACGATGCTCCGGAGGGATTACGAACCCGAGGAAAATCTTGCAAAGCTGGGGAAGTAA
>KLTH0G01914g.aa MTRITTNEFSGPTFKPQAFIQHERRESQLNIDAVNVFLESDPANAQLTHDLVTEVTMDPV LKTGSEYYDMSKDQHRRATALKIAKMAVYLEQDIKRAARNYRGGAVEKFQTSDKTPILTA QDLAIFDKRLSIISNQDPQLGTRIGVHLGLFGNCIRGNGTNEQIRYWLQEKGALFLKGIY GCFAMTELGHGSNVAQLQTRAEYNIQTDTFLINTPNLPATKWWIGGAAHSATHATVYARL IVKGKDYGVKTFVVPLRDPGTFQLLPGVFIGDIGTKMGRDGIDNGWIQFKNVVIPREFML CRFTKVIRSEQGDDAKVWSEPTLDQISGYSALLNGRVNMVMDSFRFGAKFVTIAVRYAVG RQQFAPAGDKTGKAEETQLINYPLHQYRVLPHLAVVYLISPVAFNLMATYHSTLDQLFKA SSSGDKKQLGPVSLKLKDLFIDSASLKATNTWLVATAIDELRQACGGLGYSAYNGFGKGF SDWVVQCTWEGDNSILSLTSARSILKKFTDLSKGKVQESQSFKYLSPSFVTQVLRGSKSA QIRSLEDYIEVWGIMLVKILHYCVDLVSKTKNTDSISKHLIMISRFHAFHTMLQAYYEKL KSPEDSHVSDQESQKMLWNLFRLFSLYFIDKHSGEFLQFKVFTPDQIQTIVQPQLLALLP EIRKECIALTDAFKLPDAMLNAPIGYYDGDIYNNYYAEVLKNNPPEAPGPGKPNYHEVLT TMLRRDYEPEENLAKLGK*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/KLTH/KLTH0G01914g