HomeKLTH0B09306g
similar to uniprot|P25045 Saccharomyces cerevisiae YMR296C LCB1 Component of serine palmitoyltransferase, responsible along with Lcb2p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine
Element type: CDS
Element length: 1659 nucleotides,
on anti-sense strand of
Klth0B: complement(762842..764500).
Other names:
KLTH-ORF14625
Coding sequence: 553 codons.
Element length: 1659 nucleotides,
on anti-sense strand of
Klth0B: complement(762842..764500).
Other names:
KLTH-ORF14625
Coding sequence: 553 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0100 GL3C0100.F1 GL3C0100.N6Orthologs by synteny: ZYRO0D07282g SAKL0H01144g KLLA0A09955g ERGO0B08624g
Protein KLTH0B09306p 
similar to uniprot|P25045 YMR296C Saccharomyces cerevisiae LCB1 Component of serine palmitoyltransferase responsible along with Lcb2p for the first committed step in sphingolipid synthesis
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>KLTH0B09306g.nt TCTTCATCTTTTTAGATGTTTAAGCGAAAAGCGGTTTGCCGCGGTCTTGAGTTTCTGAGC TTGACACAAGCGCTTCCGCGAATAATAGGGTGCTAGTAGAAAAGAAGATCGTAGTTGGGC GCTGAAAGAAAGGTTTCAGTCGCAATAGGTTGTCTTCTTGGTCCGCTGGCGTCCCTTGTG GATAGAACTTTCGAGGATTAAGGATGATCGCTAAGGGGCGAAACTTATATACTTTATCTT CTGCCCCTTGAAGGCAGCAAGGTGCGGAGCGGTACCGATGAAGCCGGGTAATAATCAGCT CGCTTTTTTATTTGTTTACACCTCCTGGGAGAATCGAACAGCAGTTGAGAGCAGAGTTCG AATGTAAGGATGTTGAGGTATGGGTGGATGGGCTCAAACGCATGTACGGATGCAAGACCC ACAAAGGTATGGGTTGTGGTGCGACTTGGGTGCACGGGTGAAGGCGCGCTAACAGGATCA TCAGGTGATCGCTATTTTCAAGTTCGGGTAAACTATCACCTCGTAGAGCACATAGAGCGA GCTCCGCTCAGGGCGGGCCGCAGAGCACAGCTTGAGCCGAAACTTCAACGCACTACGTTG GCACCGAAAACCGTCCAACAGCTCTGGAGCGCAGCTTCTGAAAACGTCCGGCGGTCAGTT GTGAGCCATTCCTTGTTTTGGTATACGGGAACACGCCTCAGTTGCAAATTTCTTGCAACC GTCATTGGAGGACACCGCGGTTGAAGGTCATCTGGAGGCAATGAGCAGAGAAGAGTCAAA CACGCCTCTTGAAACACCGGCTAGCGGCCCCGAGCTGTAACTTCGGTAAAACTTGCTTGC GTAATCCTCAACATCACGTTCAACGAAGAAAGGACCGATGCTGTAACTTTTTCGATACCA TAACATATCCGTAGCGTCCTAGGATCATGAACAGACATAAACCCACTCTCTCCTCCTCTA CCAGCAGTGCACGAGGCTCCCTACTGTTACAAAGACCACAATGCGCCAGCCTCCAGAGGT TCTCCCCTCATCCATCCCAGTCCCAGAGGCAGTCCTGCGCTCCTCGTCGTACGTGTGGTA CTACTGTCAACGCGCAGCGCACGCCATCCCTGGCATGCGCTACGTGGTGTCGTACGTACG GAAGTCGCACCAGGACGATCCCTACCGCACGCTTTTTGAGCTCTTTCTCATAATATATGG TATCATCTACTTCTTCAGGAAACCCCGCAAGCAGGGCGAGCAGGCTGCCCCCAAGCTTTC GGAGCGCGAGGTTGAGGCTCTTCTCGACGAGTGGGAACCCGAACCTATCGCGCAGCAAAA CATAAAACTCGAGTGGCGCGCCAAGTCCACGCCCGTACTTATGGGTAACAGCAGCGCGCC TACTCGTGTGAACTTGACGCGCGACGAGGGCCGCGAGTCCTACTCTGACGTGCTCAACTG CGCGTCCACTAGTTTCCTACAAATTTCTAGCGACCCCGAGTTTGTAAAGGCCGCCAAAGA CACTATCCACCAGTACGGTGTCGGCGCATGTGGGCCAGCCGGTTTTTATGGTAACCAGGA TGTGCACTCGGAACTGGAGTACAACTTGGCGCGCTTTTTCGGCACCGAAAGAGCTGTTCT CTACGGCCAAGACTTCTGCATCGCAGCTTCCGTAATCCCAGCCTTTACCAAGCGTGGTGA CGTGATTGTCGCTGATGACCGCGTCAATGTCGCCCTCCAGAATGCTCTACAACTGAGTCG GTCTACTGTTTACTACTACAACCATAACGATATGGAGGCCCTTGAGGAGCTCCTTGAGCA GCTGCAAGAGCGCGAGCTCAATGAAAAACTGCCATCGCTTCCCAGAAAGTTCATCGTTAC CGAGGGCCTTTTCCAGAATTTGGGCGACATACCCGACTTGCCTCGGCTCGTGGAACTAAA GCGGAAGTACAAATACAGATTGTTGGTTGATGAGACTTTCTCGCTAGGCGTTTTGGGCGC CAACGGCCGCGGTATCGCTGAGTATTACAACATGAAGCGCGATGCCTCCGTCGACATTAC AATTGGCTCGCTGGCGGTGGCTTTAGGGTCTTCAGGTGGTTTCGTGCTTGGCGACAACGT CATGTCCATGCACCAGCGCATTGGCTCGCACGCTTACACATTTTCCGCAGCACTACCAGC CTTCGCCGTGACCACGGCGTCCAGAGTCCTGGATCATCTAGAGCACGACAATTCCGCAGT ACAGAAGCTGCGCTCCCTGTCACAGCTCATGCACCAGCTCTTCATCGATGACAGTGAACT TTCTCCCTACATCGAAGTCACGTCCTCCAAGGAATCTAGCATTTTGCATTTCAGACTCAC GGATGAGTACCGTTCGCGCGTGTTCCACACCACTGAAGAATCGCTATTCCAAGAACTATC GGCTATGCACGCTAAAAACTTGAGTGAGAAGTACATTGAAGGGTGCGAGCGCGAAGAGAA GCTCTTGCAACGCATTGTTGATATGGCCTTAAAGGAGCACAAAGTGTTGCTTACTCGCAA CACCTTCGTGTTGAAGCACGAGACCCTACCCGTGACTCCTAGCCTTAAGCTCTGCTGCAG CGCCAAGATGACTGAAGACGAATTGCGCAGTGCGTGCGAAAGCGTTAAGAGCGCCGTCCT CGCCTGCACCTCAGAATAGTTTGATAAATTGCATGTAGACTTAATCTAGACTAGTTATGC TTCTGGAACGAGCCAAGGGTGCGCCGCCTATTTATCTATACACCCAGTCATAGTGTCCAT TGAATACTTGCGCGAGTCAGAGATCATCGAAGTGCACTCGAATTCGACTCTGAATAGGTT TCCATTGTTGAAGAACACGATGAATGACACTACGACGAGGAACATGGGCACCGCGTCGAA GACGTAGATGAACCATTCGTGCTCCATGATGTACCCGTTGAACCCCTGGGCGAACTCGAC AAGCCGCACAATAGAACGC
>KLTH0B09306g.cds ATGCGCCAGCCTCCAGAGGTTCTCCCCTCATCCATCCCAGTCCCAGAGGCAGTCCTGCGC TCCTCGTCGTACGTGTGGTACTACTGTCAACGCGCAGCGCACGCCATCCCTGGCATGCGC TACGTGGTGTCGTACGTACGGAAGTCGCACCAGGACGATCCCTACCGCACGCTTTTTGAG CTCTTTCTCATAATATATGGTATCATCTACTTCTTCAGGAAACCCCGCAAGCAGGGCGAG CAGGCTGCCCCCAAGCTTTCGGAGCGCGAGGTTGAGGCTCTTCTCGACGAGTGGGAACCC GAACCTATCGCGCAGCAAAACATAAAACTCGAGTGGCGCGCCAAGTCCACGCCCGTACTT ATGGGTAACAGCAGCGCGCCTACTCGTGTGAACTTGACGCGCGACGAGGGCCGCGAGTCC TACTCTGACGTGCTCAACTGCGCGTCCACTAGTTTCCTACAAATTTCTAGCGACCCCGAG TTTGTAAAGGCCGCCAAAGACACTATCCACCAGTACGGTGTCGGCGCATGTGGGCCAGCC GGTTTTTATGGTAACCAGGATGTGCACTCGGAACTGGAGTACAACTTGGCGCGCTTTTTC GGCACCGAAAGAGCTGTTCTCTACGGCCAAGACTTCTGCATCGCAGCTTCCGTAATCCCA GCCTTTACCAAGCGTGGTGACGTGATTGTCGCTGATGACCGCGTCAATGTCGCCCTCCAG AATGCTCTACAACTGAGTCGGTCTACTGTTTACTACTACAACCATAACGATATGGAGGCC CTTGAGGAGCTCCTTGAGCAGCTGCAAGAGCGCGAGCTCAATGAAAAACTGCCATCGCTT CCCAGAAAGTTCATCGTTACCGAGGGCCTTTTCCAGAATTTGGGCGACATACCCGACTTG CCTCGGCTCGTGGAACTAAAGCGGAAGTACAAATACAGATTGTTGGTTGATGAGACTTTC TCGCTAGGCGTTTTGGGCGCCAACGGCCGCGGTATCGCTGAGTATTACAACATGAAGCGC GATGCCTCCGTCGACATTACAATTGGCTCGCTGGCGGTGGCTTTAGGGTCTTCAGGTGGT TTCGTGCTTGGCGACAACGTCATGTCCATGCACCAGCGCATTGGCTCGCACGCTTACACA TTTTCCGCAGCACTACCAGCCTTCGCCGTGACCACGGCGTCCAGAGTCCTGGATCATCTA GAGCACGACAATTCCGCAGTACAGAAGCTGCGCTCCCTGTCACAGCTCATGCACCAGCTC TTCATCGATGACAGTGAACTTTCTCCCTACATCGAAGTCACGTCCTCCAAGGAATCTAGC ATTTTGCATTTCAGACTCACGGATGAGTACCGTTCGCGCGTGTTCCACACCACTGAAGAA TCGCTATTCCAAGAACTATCGGCTATGCACGCTAAAAACTTGAGTGAGAAGTACATTGAA GGGTGCGAGCGCGAAGAGAAGCTCTTGCAACGCATTGTTGATATGGCCTTAAAGGAGCAC AAAGTGTTGCTTACTCGCAACACCTTCGTGTTGAAGCACGAGACCCTACCCGTGACTCCT AGCCTTAAGCTCTGCTGCAGCGCCAAGATGACTGAAGACGAATTGCGCAGTGCGTGCGAA AGCGTTAAGAGCGCCGTCCTCGCCTGCACCTCAGAATAG
>KLTH0B09306g.aa MRQPPEVLPSSIPVPEAVLRSSSYVWYYCQRAAHAIPGMRYVVSYVRKSHQDDPYRTLFE LFLIIYGIIYFFRKPRKQGEQAAPKLSEREVEALLDEWEPEPIAQQNIKLEWRAKSTPVL MGNSSAPTRVNLTRDEGRESYSDVLNCASTSFLQISSDPEFVKAAKDTIHQYGVGACGPA GFYGNQDVHSELEYNLARFFGTERAVLYGQDFCIAASVIPAFTKRGDVIVADDRVNVALQ NALQLSRSTVYYYNHNDMEALEELLEQLQERELNEKLPSLPRKFIVTEGLFQNLGDIPDL PRLVELKRKYKYRLLVDETFSLGVLGANGRGIAEYYNMKRDASVDITIGSLAVALGSSGG FVLGDNVMSMHQRIGSHAYTFSAALPAFAVTTASRVLDHLEHDNSAVQKLRSLSQLMHQL FIDDSELSPYIEVTSSKESSILHFRLTDEYRSRVFHTTEESLFQELSAMHAKNLSEKYIE GCEREEKLLQRIVDMALKEHKVLLTRNTFVLKHETLPVTPSLKLCCSAKMTEDELRSACE SVKSAVLACTSE*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/KLTH/KLTH0B09306p