KLLA0F24838g


similar to uniprot|Q08773 Saccharomyces cerevisiae YOR304W ISW2 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes

Genomic environment map

Element type: CDS
Element length: 3189 nucleotides,
on anti-sense strand of
Klla0F: complement(2309842..2313030).
Other names:
KLLA-ORF297
Coding sequence: 1063 codons.
Database cross references:
EMBL: CR382126
GeneID: 2895186
HOGENOM: Q6CIQ3

Computed results  

None available yet

Protein KLLA0F24838p  


similar to uniprot|Q08773 Saccharomyces cerevisiae YOR304W ISW2 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes ATPase component that with Itc1p forms a complex required for repression of a-specific genes INO1 and early meiotic genes during mitotic growth

Protein domain map

Protein length: 1062 amino acids
Protein family: GL3M4588
Database cross references:
InterPro: IPR000330
InterPro: IPR001005
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014021
InterPro: IPR015194
InterPro: IPR015195
KEGG: kla:KLLA0F24838g
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00176
Pfam: PF00271
Pfam: PF09110
Pfam: PF09111
RefSeq: XP_456186.1
SMART: SM00487
SMART: SM00490
SMART: SM00717
UniProtKB/TrEMBL: Q6CIQ3
UniprotKB: Q6CIQ3_KLULA

Computed results for KLLA0F24838p  

Blastp Genolevures
Blastp Uniprot

Gene Ontology terms  

GO:0043044 ATP-dependent chromatin remodeling
GO:0031491 nucleosome binding
GO:0016585 chromatin remodeling complex
GO:0005524 ATP binding
GO:0004386 helicase activity
GO:0003677 DNA binding

Sequence data  


Nucleotide sequence    

>KLLA0F24838g.nt
TCTATTCAGGAAGCTTTGGAGGAAGCAAAATTTTTGAAGTGGTGGAATGAAGAATCACAA
AGGATACAAGCCCAACAAGCGGCGTCGGAGATGCTAATGGGAATGGAGACCGGAATCCCA
TCTTCGAAGCCTGGTTCCCTTAAAAAATCTTCTTCGATACAATCTAATGGTAAACGCAAA
AGTAAATCAGCGGATAAATCTATGCGTGGAAATAACACATCCAAAATATCGACAAATCAA
CCTGAAAAGCATGATCAGACATCCAATACGAGTAACAATCGAAGAAGAAGTTGCACAAAT
CCAAATAGACAATCCTAAATACATGTTATAGAGCATACCAAATCTCGCTAAGTGGTATAA
TTCAGAGCAACAATCGGTACTAAAAAAGGCAGCTGAACCACTTAATCAGTATGCGCTTGA
TATCGTTCTTGATCACATATGTGATCTTACAAGTTATGTATATCTATATCAACTTAATCG
TGTAAATATTAAATGGTCATGTTCTACTTATTCTGCGCTTTGTACTAATGGTAGATGCAA
GGCTAATCACATTCTGCCACGCTTTGTTCTTTAAAGTCAATGAGACTACTCTGAGGTATG
TCCGTTCTGAGATCATGTATTATCATCATTTTCCACGCGGTTTGTTGTCCTAGCGATTTG
AAAAAATGTAAATTTCCAAAAAATAATGAGTTGTGACTATCCACACTCCACTAAGAAACC
TATGGATATCGAATTCTCTGTTGCCATCCTATCATCATCGATCAACATTGCCTACAATGG
TTGAGGAAGAGGTATGCTAAATGTCTTTATGTTCAACTGTACTTCAATGGTTACTGATAA
TATCTGTCATGAACTTCGGTGCTTCTCCCCGTTGAGTTTATCAACGTATTAGGATGACAG
TAATCACTAGAAGCACATAACAACTTCACACTTGGGCGGACCTCTGCATAAGATACTAAC
CACCTTTATCTAAAAATACTCATAGAAATCTGCTACAAAAATGGAGAATCCTGTTAGCAA
TAATCAACATGATGAGAAGTACTGGTCCGAAAGAAGATCTAAGTTCTTACTTGATGTTGA
TCCGAAAATAGCTAAACAAAGGAATAAAGAAGACACTTATATTCGCTTCAAGCACCTTTT
GCAAATTACTGATCTTTTCAGACACTTTATTGGGATCAGAGCCAAATATGATAAAAACAT
GCAAAAATTACTGAAGACCATAGATGCTGAAAACAAAGTTGCTGGAACGTTGAAAGAGCC
AGCCGGTCATCTCGCTAGGGCTCCAAGGCACTATAGAAAGACAGAACAAGAAGAAGATGC
TGAATTGATGGAGGATGAGGAAGTTGAGTTAGAAGAGGATACAACAATTTTGACACAATC
ACCGAGTTTCATAAAGGAAGGGAAATTAAGAGATTATCAAGTTTACGGTCTGAATTGGTT
GATTTCTCTACATGAAAGCAAGCTTTCTGGGATTTTGGCTGATGAAATGGGACTTGGTAA
AACGTTGCAATCAATATCGTTCCTAGGTTATCTTCGGTATATTAAAGGTATCGAGGGGCC
ATATATTGTGATTGTACCTAAATCCACACTAGATAACTGGCAAAGAGAGTTTGCCAAATG
GACTCCTGAAGTCAAAACAGTCATTCTTCAAGGTGACAAGGATTTCAGAAAAGAACTCAT
TGAAACTAAGATTTTAACATGTAACTTTGACGTGCTAATTACCTCTTATGAGATGGTATT
GAAAGAGAAGTTAACACTTAAAAGATTTGCATGGGAATATATTCTAATCGACGAAGCTCA
TCGAATTAAGAATGAACAGAGCGCCTTGTCACAGGTGATAAGACTGTTTTACTCCAAAAA
TCGTCTCTTAATCACTGGTACACCTCTACAGAACAATTTGCATGAACTTTGGGCTCTTTT
GAATTTCTTACTACCTGATGTCTTTGGTGACTCAGAAGTATTTGATGAATGGTTCCAACA
AAACGGAAAGGAAGAAGATCAAGAGGTTGTTGTTCAGCAACTTCATTCGGTTTTACAACC
TTTTTTACTTAGAAGAGTGAAATCTGAGGTCGAAAAATCATTACTTCCGAAGAAAGAGAT
TAATCTATACGTAGGGATGACGGACATGCAAATAGAATGGTACAAATCACTATTGGAGAA
AGACATCGATGCCGTAAATGGAGCCGTCGGTAAGCGAGAAGGTAAAACAAGATTATTAAA
TATTGTTATGCAGTTGAGAAAGTGTTGCAATCATCCATACCTTTTCGAAGGAGCAGAACC
TGGCCCTCCTTATACTACAGATGAACATTTAGTCTTCAATTCGGGAAAAATGATTGTACT
TGATAAATTGCTAAAAAAGAAAAAGGAACAAGGCTCGAGAGTCCTTATATTTTCACAAAT
GTCACGGTTGCTAGATATTTTAGAAGATTACTGTTATTTCAGGGGATATGAATACTGCAG
AATTGATGGCTCAACTTCGCATGATGAAAGAGTTGAAGCTATTGATGAGTATAATAAACC
AAATTCGGAAAAATTTATTTTTTTACTTACTACTCGTGCTGGAGGATTGGGTATTAACTT
AGTGACAGCCGATACTGTTGTACTCTATGATTCCGATTGGAATCCACAGGCCGATTTACA
AGCCATGGATCGTGCTCATAGGATTGGTCAAAAAAAACAGGTGTTTGTGTATAGATTCGT
CACCGAAAATGCAATTGAAGAGAAAGTGATAGAGAGGGCTGCTCAAAAACTTAGATTAGA
CCAGTTGGTAATTCAGCAGGGTACAGGAAAGAAGACTTCGGCGCTGACGAACAACAAAGA
TGACCTAATTGATATGATACAATTTGGAGCAAGAGATATGCTTCAGCATGGCTCTGGTAA
TATAACTGTTGATGAAGACATTGATGAAATTTTGAAAAAGGGTGAGAGAAAGACATTGGA
ACTTAATGCAAAATATGAATCTCTTGGTCTCGATGACCTACAAAAGTTCAATGGTATGGC
TGATCAATCCGCTTACGAATGGAATGGAACAAATTTTGAGAAGAAGAAGCCAGATGATCA
TACTGTTGATTGGATCAATCCGCCTAAAAGAGAGCGTAGACGAGAACAGCCTCTGTATTC
AGTGGATGATTATTATAGAGAAGTTATAGGTAATGGAAAGAGCAAACCTTCAGGAAGCAA
CACCCCAGCTCTGAAATTACCAAAACAACCTAAAGTTATTCGTATGACTTATTATCAGTT
TGCACATCCAGAATTTGTCCGGCTACAGGAGCTAGAACAACTTTGGTATAAGAAAAGTGT
CGGATACAAAATCACCGCATATGATGTTAAAGAACACGCAGATGAAAGTGAGGGTGACGA
TGATGACGAAGAGGATTCCAGATCGGACGGAGAATCAGATGATACTAACAATGCACAAAA
ACAAGAAGATGATATTGACGCTAAGATTGCTGAAGAGCAAGCAAAAATTGACGCTGCTGA
AGAATTCACTGATGAAAATTTGGAACAAAAGCAAAGATTCCTGGAAGAATCTTTCTATAA
TTGGAATAAACGTGAATTTTTAGCCTTCATCAGTGCATGCATAAAATTTGGTAGAGACAA
TTATGTTTCAATATCCAAAGCAATTCATACGAAAACGCCAGAGGAAGTTCAGAGGTACTC
TGAAACGTTTTGGAAACGCTACAAGGAAGTCCAAGGATGGGAGAAGTATGTCGCAAACAT
CGAAGCTGGTGAAAAGAAGACTGAAAAGCTAAAGATACAGGAAACAATTTTGAAGCAGAA
GCTTCAGCAATATCAGTATCCCTTAGTAGAATTGAAAATATTATATCCTCCCAACAATAC
CAGAAGAACTTACAATTCATTAGAAGATATATTTTTACTCGTTACTGTCGGTAACTTGGG
TTTGTTTGCCAGTAATCTATATGAAAGAGTCAAGCAGGAAATACTGAAAAGTCCATTGTT
CATATTTTCTTGGTTTATTAAAACAAGGACACCTTTGGATATTTCTAAGAGAATAGCCAC
TCTATTAACACTTGTGCAACGTGAACATGAAGGGGTAGAACACAAAAGAAAACGTAAAAC
CGTTACTTCTGCTGACGACCAACCAAATGATAGTCACAACCTTAACGCTAACGTGGTGTC
TTCACCACCCTCAAAAAGAATACATACTGATAAGCAGTTTATAGATTAGATAGTTTAAGC
CTAGAATTTGTATGCATTTATCGTACTCGTTAAGAAAAAATACAACAAAAAACTATTTGA
ATGCAAAAGATCCATCTGCTAGTAGTTTTAATTTGCCGCGATCATTACTGTGACCTTCGT
GTTTCCGCTTCTTGGTATTATCATTGTTTGCCTTAATCACAGATTCAGATTTTGGGAGGG
AAGCTCGCAGGCTCACGTATTTCTCTATTAGCTCCTTATTATTTAAGACGTCCTCTGCAG
CACGCATTCCTGCTATCTTTATGTTCTTTCCGACACCTCTGCCCAATAC

Coding sequence    

>KLLA0F24838g.cds
ATGGAGAATCCTGTTAGCAATAATCAACATGATGAGAAGTACTGGTCCGAAAGAAGATCT
AAGTTCTTACTTGATGTTGATCCGAAAATAGCTAAACAAAGGAATAAAGAAGACACTTAT
ATTCGCTTCAAGCACCTTTTGCAAATTACTGATCTTTTCAGACACTTTATTGGGATCAGA
GCCAAATATGATAAAAACATGCAAAAATTACTGAAGACCATAGATGCTGAAAACAAAGTT
GCTGGAACGTTGAAAGAGCCAGCCGGTCATCTCGCTAGGGCTCCAAGGCACTATAGAAAG
ACAGAACAAGAAGAAGATGCTGAATTGATGGAGGATGAGGAAGTTGAGTTAGAAGAGGAT
ACAACAATTTTGACACAATCACCGAGTTTCATAAAGGAAGGGAAATTAAGAGATTATCAA
GTTTACGGTCTGAATTGGTTGATTTCTCTACATGAAAGCAAGCTTTCTGGGATTTTGGCT
GATGAAATGGGACTTGGTAAAACGTTGCAATCAATATCGTTCCTAGGTTATCTTCGGTAT
ATTAAAGGTATCGAGGGGCCATATATTGTGATTGTACCTAAATCCACACTAGATAACTGG
CAAAGAGAGTTTGCCAAATGGACTCCTGAAGTCAAAACAGTCATTCTTCAAGGTGACAAG
GATTTCAGAAAAGAACTCATTGAAACTAAGATTTTAACATGTAACTTTGACGTGCTAATT
ACCTCTTATGAGATGGTATTGAAAGAGAAGTTAACACTTAAAAGATTTGCATGGGAATAT
ATTCTAATCGACGAAGCTCATCGAATTAAGAATGAACAGAGCGCCTTGTCACAGGTGATA
AGACTGTTTTACTCCAAAAATCGTCTCTTAATCACTGGTACACCTCTACAGAACAATTTG
CATGAACTTTGGGCTCTTTTGAATTTCTTACTACCTGATGTCTTTGGTGACTCAGAAGTA
TTTGATGAATGGTTCCAACAAAACGGAAAGGAAGAAGATCAAGAGGTTGTTGTTCAGCAA
CTTCATTCGGTTTTACAACCTTTTTTACTTAGAAGAGTGAAATCTGAGGTCGAAAAATCA
TTACTTCCGAAGAAAGAGATTAATCTATACGTAGGGATGACGGACATGCAAATAGAATGG
TACAAATCACTATTGGAGAAAGACATCGATGCCGTAAATGGAGCCGTCGGTAAGCGAGAA
GGTAAAACAAGATTATTAAATATTGTTATGCAGTTGAGAAAGTGTTGCAATCATCCATAC
CTTTTCGAAGGAGCAGAACCTGGCCCTCCTTATACTACAGATGAACATTTAGTCTTCAAT
TCGGGAAAAATGATTGTACTTGATAAATTGCTAAAAAAGAAAAAGGAACAAGGCTCGAGA
GTCCTTATATTTTCACAAATGTCACGGTTGCTAGATATTTTAGAAGATTACTGTTATTTC
AGGGGATATGAATACTGCAGAATTGATGGCTCAACTTCGCATGATGAAAGAGTTGAAGCT
ATTGATGAGTATAATAAACCAAATTCGGAAAAATTTATTTTTTTACTTACTACTCGTGCT
GGAGGATTGGGTATTAACTTAGTGACAGCCGATACTGTTGTACTCTATGATTCCGATTGG
AATCCACAGGCCGATTTACAAGCCATGGATCGTGCTCATAGGATTGGTCAAAAAAAACAG
GTGTTTGTGTATAGATTCGTCACCGAAAATGCAATTGAAGAGAAAGTGATAGAGAGGGCT
GCTCAAAAACTTAGATTAGACCAGTTGGTAATTCAGCAGGGTACAGGAAAGAAGACTTCG
GCGCTGACGAACAACAAAGATGACCTAATTGATATGATACAATTTGGAGCAAGAGATATG
CTTCAGCATGGCTCTGGTAATATAACTGTTGATGAAGACATTGATGAAATTTTGAAAAAG
GGTGAGAGAAAGACATTGGAACTTAATGCAAAATATGAATCTCTTGGTCTCGATGACCTA
CAAAAGTTCAATGGTATGGCTGATCAATCCGCTTACGAATGGAATGGAACAAATTTTGAG
AAGAAGAAGCCAGATGATCATACTGTTGATTGGATCAATCCGCCTAAAAGAGAGCGTAGA
CGAGAACAGCCTCTGTATTCAGTGGATGATTATTATAGAGAAGTTATAGGTAATGGAAAG
AGCAAACCTTCAGGAAGCAACACCCCAGCTCTGAAATTACCAAAACAACCTAAAGTTATT
CGTATGACTTATTATCAGTTTGCACATCCAGAATTTGTCCGGCTACAGGAGCTAGAACAA
CTTTGGTATAAGAAAAGTGTCGGATACAAAATCACCGCATATGATGTTAAAGAACACGCA
GATGAAAGTGAGGGTGACGATGATGACGAAGAGGATTCCAGATCGGACGGAGAATCAGAT
GATACTAACAATGCACAAAAACAAGAAGATGATATTGACGCTAAGATTGCTGAAGAGCAA
GCAAAAATTGACGCTGCTGAAGAATTCACTGATGAAAATTTGGAACAAAAGCAAAGATTC
CTGGAAGAATCTTTCTATAATTGGAATAAACGTGAATTTTTAGCCTTCATCAGTGCATGC
ATAAAATTTGGTAGAGACAATTATGTTTCAATATCCAAAGCAATTCATACGAAAACGCCA
GAGGAAGTTCAGAGGTACTCTGAAACGTTTTGGAAACGCTACAAGGAAGTCCAAGGATGG
GAGAAGTATGTCGCAAACATCGAAGCTGGTGAAAAGAAGACTGAAAAGCTAAAGATACAG
GAAACAATTTTGAAGCAGAAGCTTCAGCAATATCAGTATCCCTTAGTAGAATTGAAAATA
TTATATCCTCCCAACAATACCAGAAGAACTTACAATTCATTAGAAGATATATTTTTACTC
GTTACTGTCGGTAACTTGGGTTTGTTTGCCAGTAATCTATATGAAAGAGTCAAGCAGGAA
ATACTGAAAAGTCCATTGTTCATATTTTCTTGGTTTATTAAAACAAGGACACCTTTGGAT
ATTTCTAAGAGAATAGCCACTCTATTAACACTTGTGCAACGTGAACATGAAGGGGTAGAA
CACAAAAGAAAACGTAAAACCGTTACTTCTGCTGACGACCAACCAAATGATAGTCACAAC
CTTAACGCTAACGTGGTGTCTTCACCACCCTCAAAAAGAATACATACTGATAAGCAGTTT
ATAGATTAG

Predicted translation product    

>KLLA0F24838g.aa
MENPVSNNQHDEKYWSERRSKFLLDVDPKIAKQRNKEDTYIRFKHLLQITDLFRHFIGIR
AKYDKNMQKLLKTIDAENKVAGTLKEPAGHLARAPRHYRKTEQEEDAELMEDEEVELEED
TTILTQSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRY
IKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLI
TSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNL
HELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKS
LLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPY
LFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYF
RGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDW
NPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTS
ALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLDDL
QKFNGMADQSAYEWNGTNFEKKKPDDHTVDWINPPKRERRREQPLYSVDDYYREVIGNGK
SKPSGSNTPALKLPKQPKVIRMTYYQFAHPEFVRLQELEQLWYKKSVGYKITAYDVKEHA
DESEGDDDDEEDSRSDGESDDTNNAQKQEDDIDAKIAEEQAKIDAAEEFTDENLEQKQRF
LEESFYNWNKREFLAFISACIKFGRDNYVSISKAIHTKTPEEVQRYSETFWKRYKEVQGW
EKYVANIEAGEKKTEKLKIQETILKQKLQQYQYPLVELKILYPPNNTRRTYNSLEDIFLL
VTVGNLGLFASNLYERVKQEILKSPLFIFSWFIKTRTPLDISKRIATLLTLVQREHEGVE
HKRKRKTVTSADDQPNDSHNLNANVVSSPPSKRIHTDKQFID*



Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites