KLLA0F04103g

uniprot|O94229 Kluyveromyces lactis KLLA0F04103g IDH1 Isocitrate dehydrogenase subunit 1

Genomic environment map

Element type: CDS
Element length: 1086 nucleotides,
on sense strand of
Klla0F: 389159..390244.
Other names:
KLLA-ORF2209
Coding sequence: 362 codons.

Database cross references:
EMBL: AF045153
EMBL: CR382126
GeneID: 2894997
GenomeReviews: CR382126_GR
HOGENOM: HBG518924

Computed results

None available yet

Homologs and Orthologs

Génolevures family GL3C0069
Consensus family of 44 members, sczltkgdpy (4 4 4 4 4 4 4 4 8 4)
44-member family, phyletic pattern sczltkgd-py, profile (4 4 4 4 4 4 4 4 0 8 4)
Proteins: SACE0C01144p SACE0I01870p SACE0N06446p SACE0O06864p CAGL0G02585p CAGL0G02673p CAGL0H03795p CAGL0I07227p ZYRO0A01914p ZYRO0D02838p ZYRO0D11220p ZYRO0E04796p SAKL0D08690p SAKL0E07656p SAKL0E07876p SAKL0G03520p KLTH0F15048p KLTH0G10186p KLTH0G10384p KLTH0H12188p KLLA0D04906p KLLA0E03125p KLLA0E08339p KLLA0F04103p ERGO0A04114p ERGO0D04114p ERGO0D04334p ERGO0F08822p DEHA2C10758p DEHA2C16852p DEHA2G05786p DEHA2G10978p PISO0C08670p PISO0D08737p PISO0E08122p PISO0F09465p PISO0G11798p PISO0H11799p PISO0K22252p PISO0L22253p YALI0C00407p YALI0D06303p YALI0D10593p YALI0E05137p
Search in: Génolevures Google

Homologs in protein family: GL3C0069
Orthologs: strict determination not possible; homologs must be refined manually

Protein KLLA0F04103p

uniprot|O94229 Kluyveromyces lactis KLLA0F04103g IDH1 Isocitrate dehydrogenase subunit 1; RecName: Full=Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial; EC=1.1.1.41; AltName: Full=Isocitric dehydrogenase; AltName: Full=NAD(+)-specific ICDH; Flags: Precursor;

Protein domain map

Protein length: 361 amino acids
Protein family: GL3C0069

Database cross references:
Gene3D: G3DSA:3.40.718.10
InterPro: IPR001804
InterPro: IPR004434
InterPro: IPR019818
InterPro: IPR024084
KEGG: kla:KLLA0F04103g
PANTHER: PTHR11835
PANTHER: PTHR11835:SF5
PROSITE: PS00470
Pfam: PF00180
RefSeq: XP_455266.1
SMR: O94229
TIGRFAMs: TIGR00175
UniProtKB/Swiss-Prot: O94229
UniProtKB: IDH1_KLULA

Computed results for KLLA0F04103p

None available yet

Gene Ontology terms

Sequence data

>KLLA0F04103g.nt
ATGTTGAGACAAGGTATTGCTGCTCAAAAAAAGTCCTTCGCTACCCTAGCAGCTGAACAA
TTGTTGCCAAAGAAGTACGGTGGTCGCTACACTGTAACTTTGATTCCAGGTGATGGTGTT
GGTAAGGAAGTGACCGACTCAGTAGTCAAGATCTTCGAAAACGAAAATATTCCAATCGAC
TGGGAAACTATCGACATTTCTGGTCTAGAAAACACTGAAAATGTACAAAGAGCTGTCGAA
TCTTTAAAGAGAAACAAGGTTGGTTTGAAAGGTATCTGGCACACTCCAGCCGACCAAACC
GGTCATGGCTCATTGAACGTTGCTTTGAGAAAGCAACTGGATATTTTCGCCAATGTCGCC
TTGTTCAAATCAATTCCAGGTGTCAAGACTAGATTGAATAACATCGACATGGTTATCATC
AGAGAAAACACTGAAGGTGAATACTCTGGTTTAGAACACGAATCTGTTCCAGGTGTCGTT
GAATCTTTGAAGATCATGACCAGGGCTAAGTCAGAAAGAATTGCTAGATTCGCCTTTGAT
TTCGCCTTGAAAAACAACAGAAAGTCGGTCTGCGCTGTTCACAAAGCTAACATCATGAAA
TTGGGTGATGGTTTGTTCAGAAACACCGTTAATGAAATTGGTGCTAACGAATACCCAGAA
CTCGATGTCAAGAACATCATCGTTGACAACGCTTCCATGCAAGCTGTTGCCAAGCCACAT
CAATTCGATGTTTTGGTGACACCAAACTTGTACGGTTCTATCTTGGGTAACATTGGTTCT
GCTTTGATCGGTGGTCCCGGTCTAGTCCCAGGTGCTAACTTCGGTAGAGAATACGCTGTC
TTTGAACCAGGTTCCAGACATGTTGGTTTGGACATCAAGGGTCAAAACGTTGCTAACCCA
ACTGCTATGATCTTGTCCTCTACTCTAATGTTGAGACATCTAGGTTTGAACGCTTACGCT
GATAGAATTTCCAAAGCTACATATGATGTCATTTCTGAAGGTAAGTCAACAACAAGAGAC
ATCGGTGGTTCAGCCTCCACTTCTGAGTTCACCAACGCTGTTATCGAGAAGTTAGCCAAG
TTATGA

>KLLA0F04103g.cds
ATGTTGAGACAAGGTATTGCTGCTCAAAAAAAGTCCTTCGCTACCCTAGCAGCTGAACAA
TTGTTGCCAAAGAAGTACGGTGGTCGCTACACTGTAACTTTGATTCCAGGTGATGGTGTT
GGTAAGGAAGTGACCGACTCAGTAGTCAAGATCTTCGAAAACGAAAATATTCCAATCGAC
TGGGAAACTATCGACATTTCTGGTCTAGAAAACACTGAAAATGTACAAAGAGCTGTCGAA
TCTTTAAAGAGAAACAAGGTTGGTTTGAAAGGTATCTGGCACACTCCAGCCGACCAAACC
GGTCATGGCTCATTGAACGTTGCTTTGAGAAAGCAACTGGATATTTTCGCCAATGTCGCC
TTGTTCAAATCAATTCCAGGTGTCAAGACTAGATTGAATAACATCGACATGGTTATCATC
AGAGAAAACACTGAAGGTGAATACTCTGGTTTAGAACACGAATCTGTTCCAGGTGTCGTT
GAATCTTTGAAGATCATGACCAGGGCTAAGTCAGAAAGAATTGCTAGATTCGCCTTTGAT
TTCGCCTTGAAAAACAACAGAAAGTCGGTCTGCGCTGTTCACAAAGCTAACATCATGAAA
TTGGGTGATGGTTTGTTCAGAAACACCGTTAATGAAATTGGTGCTAACGAATACCCAGAA
CTCGATGTCAAGAACATCATCGTTGACAACGCTTCCATGCAAGCTGTTGCCAAGCCACAT
CAATTCGATGTTTTGGTGACACCAAACTTGTACGGTTCTATCTTGGGTAACATTGGTTCT
GCTTTGATCGGTGGTCCCGGTCTAGTCCCAGGTGCTAACTTCGGTAGAGAATACGCTGTC
TTTGAACCAGGTTCCAGACATGTTGGTTTGGACATCAAGGGTCAAAACGTTGCTAACCCA
ACTGCTATGATCTTGTCCTCTACTCTAATGTTGAGACATCTAGGTTTGAACGCTTACGCT
GATAGAATTTCCAAAGCTACATATGATGTCATTTCTGAAGGTAAGTCAACAACAAGAGAC
ATCGGTGGTTCAGCCTCCACTTCTGAGTTCACCAACGCTGTTATCGAGAAGTTAGCCAAG
TTATGA

>KLLA0F04103g.aa
MLRQGIAAQKKSFATLAAEQLLPKKYGGRYTVTLIPGDGVGKEVTDSVVKIFENENIPID
WETIDISGLENTENVQRAVESLKRNKVGLKGIWHTPADQTGHGSLNVALRKQLDIFANVA
LFKSIPGVKTRLNNIDMVIIRENTEGEYSGLEHESVPGVVESLKIMTRAKSERIARFAFD
FALKNNRKSVCAVHKANIMKLGDGLFRNTVNEIGANEYPELDVKNIIVDNASMQAVAKPH
QFDVLVTPNLYGSILGNIGSALIGGPGLVPGANFGREYAVFEPGSRHVGLDIKGQNVANP
TAMILSSTLMLRHLGLNAYADRISKATYDVISEGKSTTRDIGGSASTSEFTNAVIEKLAK
L*

Legend and notes

Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences

Color	Nucleotide sequence and Coding sequence	Predicted translation product
RED	start and stop codons	Initial methionine and sequence end
BLUE	coding sequence	protein sequence
grey	non-coding sequence (upstream, downstream or intron)
grey	donor and acceptor splicing sites

Genetic Elements

KLLA0F04103g

KLLA0F04103g

Genomic environment map

Computed results

Homologs and Orthologs

Protein KLLA0F04103p

Protein domain map

Computed results for KLLA0F04103p

Gene Ontology terms

Sequence data

Nucleotide sequence

Coding sequence

Predicted translation product

Legend and notes