KLLA0E23673g

highly similar to uniprot|O13516 Saccharomyces cerevisiae YPL081W RPS9A (ohnolog of YBR189W) Protein component of the small (40S) ribosomal subunit

Genomic environment map

Element type: CDS
Element length: 1157 nucleotides,
on anti-sense strand of
Klla0E: complement(join(2104879..2104885,2103729..2104288)).
Other names:
KLLA0E23760g
Klla0E.mRNA.175.m
Coding sequence: 189 codons.

Computed results

None available yet

Homologs and Orthologs

Génolevures family GL3C0228
Consensus family of 20 members, scrltkgdy (3 3 2 2 2 2 2 2 2)
20-member family, phyletic pattern sczltkgdy, profile (3 3 2 2 2 2 2 2 2)
Proteins: SACE0B06688p SACE0H04774p SACE0P04510p CAGL0H05511p CAGL0I01826p CAGL0M06501p ZYRO0A13200p ZYRO0B15400p SAKL0G15268p SAKL0H09768p KLTH0C01958p KLTH0E12826p KLLA0E15995p KLLA0E23673p ERGO0D06270p ERGO0E02376p DEHA2B02728p DEHA2B04906p YALI0F05544p YALI0F17380p
Search in: Génolevures Google

Génolevures family GL3C0228.F2
Five-SONS subgroup of a Consensus family
5-member family, phyletic pattern --zltkg--, profile (0 0 1 1 1 1 1 0 0)
Proteins: ZYRO0A13200p SAKL0H09768p KLTH0E12826p KLLA0E23673p ERGO0E02376p
Search in: Génolevures Google

Génolevures family GL3C0228.N1
Nine-SONS subgroup of a Consensus family
11-member family, phyletic pattern sczltkgdy, profile (2 2 1 1 1 1 1 1 1)
Proteins: SACE0B06688p SACE0P04510p CAGL0H05511p CAGL0M06501p ZYRO0A13200p SAKL0H09768p KLTH0E12826p KLLA0E23673p ERGO0E02376p DEHA2B04906p YALI0F05544p
Search in: Génolevures Google

Génolevures element ZYRO0A13200g
highly similar to uniprot\|O13516 Saccharomyces cerevisiae YPL081W RPS9A (ohnolog of YBR189W) Protein component of the small (40S) ribosomal subunit
Other name: Zyro0A.mRNA.3951.m
Orthologs: SAKL0H09768g KLTH0E12826g KLLA0E23673g ERGO0E02376g
Homologs: in families GL3C0228 GL3C0228.F2 GL3C0228.N1
Search in: Génolevures EMBL Google by name Google by description

Génolevures element SAKL0H09768g
highly similar to uniprot\|O13516 Saccharomyces cerevisiae YPL081W RPS9A (ohnolog of YBR189W) Protein component of the small (40S) ribosomal subunit
Other name: Sakl0H.mRNA.at.319.p
Orthologs: ZYRO0A13200g KLTH0E12826g KLLA0E23673g ERGO0E02376g
Homologs: in families GL3C0228 GL3C0228.F2 GL3C0228.N1
Search in: Génolevures EMBL Google by name Google by description

Génolevures element KLTH0E12826g
highly similar to uniprot\|O13516 Saccharomyces cerevisiae YPL081W RPS9A (ohnolog of YBR189W) Protein component of the small (40S) ribosomal subunit
Other name: Klth0E.mRNA.2647.m
Orthologs: ZYRO0A13200g SAKL0H09768g KLLA0E23673g ERGO0E02376g
Homologs: in families GL3C0228 GL3C0228.F2 GL3C0228.N1
Search in: Génolevures EMBL Google by name Google by description

Génolevures element ERGO0E02376g
Syntenic homolog of Saccharomyces cerevisiae YBR189W (RPS9B) and YPL081W (RPS9A); 1-intron
Other names: AEL255W AGOS_AEL255W
Orthologs: ZYRO0A13200g SAKL0H09768g KLTH0E12826g KLLA0E23673g
Homologs: in families GL3C0228 GL3C0228.F2 GL3C0228.N1
Search in: Génolevures EMBL Google by name Google by description

Homologs in protein families: GL3C0228 GL3C0228.F2 GL3C0228.N1
Orthologs by synteny: ZYRO0A13200g SAKL0H09768g KLTH0E12826g ERGO0E02376g

Protein KLLA0E23673p

highly similar to uniprot|O13516 Saccharomyces cerevisiae YPL081W RPS9A and to uniprot|P05755 Saccharomyces cerevisiae YBR189W RPS9B Proteins component of the small (40S) ribosomal subunit

Protein domain map

Protein length: 188 amino acids
Protein family: GL3C0228

Database cross references:
InterPro: IPR001912
InterPro: IPR002942
InterPro: IPR005710
UniProtKB/TrEMBL: Q6CM18

Computed results for KLLA0E23673p

Blastp Genolevures

Blastp Uniprot

Gene Ontology terms

None available yet

Sequence data

>KLLA0E23673g.nt
TAATCGATGTCTCCGTGTTGGGTATTGGTGAAAGAAACGGTATCACCTCTCTTGGTGGTC
TAATGGCAAGAATGATTGTATCTGCCCCAGAATACGTCAAGTCCAAATATAAGCTACACA
AGCTACGTGATTTGGAAAATCTAGTCGCAGATGCTGTCAGTGTTAATGTGCCATTTAACA
ACCCTATCACTGGATTCTGTGCATTCACACATAAGGCTGGTATTCATGCCAAGGCCATCT
TGGCTAACCCATCTACGTACGAAATTCTAAATCCAGAAGATTTCGGTATGAAGAGATATA
TTCACTTTGCCAACAGATTAACTGGTTGGAACGCAATCAAGTCTCGTGTCGAACAACTAA
ATTTGCATTTATCCGATGACCAAATTAAGGAAGTAACATCTAAGATTAAACAGATAGGTG
ATGTCAGGCAACTAAGTATCGAAGATGTCGATACTATCATCAAGGACTACCATTCTGAAC
TATAAAGGGTTCTTTCTACTTAAACATAGGCATTCACAACGGTGACAACAAGCTGCTTCA
GTTCAGTAAAATAACGATAGTCAGTAAGTCGGTATTGCTGACACCAAAGTATTTTAACAT
TTTTATCTTATTCATACATATTTAGCAGAATGATTCCATACTTTTGCATTATCTACTCTT
GCAACCTTTTTAATTCCAAACTGACCAAACCAAGTGTGTGATGAGCTCTTGCATTCCGTC
AACACCTAGCCTCCCGTCCACTTCATAACTACTTTCTAGGACACCAGGTTATGGTTTGGT
GACAGGACTGTTATCGCCCGTACACCATTGTATTTTCAACTATAGGACTAATTTCCTGAT
TTGGAAATGAGGATGCTTTCAGTATTCGACATAGTACGAACTCTGAAATTTTTGAAAAAT
TCAATGTCAGAATACCGAACGAGTATAAAAAGGCATTGTCACTTTAACAGACTAACACAT
TTCTACATGAACAAAAGAACACAAGAATCATCGAGTTACAATGCCAAgtatgtggtatca
cattccagatatgcttcattgatacactctgttacatttcaagtctttcctttggattgt
ctagagatggggaagataatgccagcatcagctagcttaaatcttccttcgaggatcggg
tcctcatgattcaattaaattattgactcaaagtatttcaagtactgatattcgatttgc
aatctaaactgtttcatttgttccttgtcgttgaaaacccgacacttcagctcaaggata
gaaacattttaatgcaaatcaataagagcgagagctcttatttagtactgtatgaattaa
cacctcattctgttgtcaattgacccacagaatggacttcgtttttttcagttatacttc
ttttttgttcatgtgttttcatgttcttaaatgtttgatgtgtcaatagtttaatgtttc
atgagtagatattatatcgcccgtttgtatatcctcgtagtgcagtgatctttggatttt
agtatcagatatattggggacaacgagtacatatgtgcacgtgagttttacaattatttt
gaatattttcactaacaagaaattattatccaaacagGAGCCCCAAGAACTTACTCCAAG
ACTTACTCTACTCCAAAGAGACCTTACGAATCCGCTCGTTTGGACGCCGAATTGAAGTTG
GCTGGTGAATACGGTTTGAAGAACAAGAGAGAAATTTACAGAATTTCTTTCCAATTGTCT
AAGATCAGAAGAGCCGCCAGAGATTTGTTGACCAGAGACGAAAAGGACCCAAAGAGATTG
TTCGAAGGTAATGCTTTGATCAGAAGATTGGTGAGAATTGGTGTCTTGTCTGAAGACAAG
AAGAAGTTGGATTATGTCTTGGCTTTGAAGGTTGAAGATTTCTTGGAAAGAAGATTGCAA
ACCCAAGTCTACAAGTTGGGTTTGGCCAAGTCTGTTCACCACGCTAGAGTCTTGATCTCC
CAAAGACACATTGCTGTTGGTAAGCAAATCGTCAACATCCCATCTTTCATGGTCAGATTG
GAATCTGAGAAGCACATTGACTTCGCTAGAACCTCTCCATTCGGTGGTGCTAGACCAGGT
AGAGTGGCCAGAAAGAGAGCTGCTGCTGCTGGTGGTGAAGAAGCTGACGAAGAATAAACG
CATTCAAAAACTACACAAAAAACTACAATTGCTGAAAACAACTAATGTTTCAGCATCACT
TTTTTATATTAGCTTTTGATCATTTTGCCTTTACTTCTTTTTCTTTTCAACTTCATTTCA
GAGTTTTTATGATGGTTAAGAAGCTGATCCCAACTATTCACTGCTGTGTTGTGTATATAG
AATTAACATCTTTCTCATGTGATTGATTTAAGCAGAAAACAGAAACAAAACTAGTGTAGC
AGTTTCATTTAATATCATTTATCTCTGTTTTACAAAAACGGTATTTTAAGGTGTATA

>KLLA0E23673g.cds
ATGCCAAGAGCCCCAAGAACTTACTCCAAGACTTACTCTACTCCAAAGAGACCTTACGAA
TCCGCTCGTTTGGACGCCGAATTGAAGTTGGCTGGTGAATACGGTTTGAAGAACAAGAGA
GAAATTTACAGAATTTCTTTCCAATTGTCTAAGATCAGAAGAGCCGCCAGAGATTTGTTG
ACCAGAGACGAAAAGGACCCAAAGAGATTGTTCGAAGGTAATGCTTTGATCAGAAGATTG
GTGAGAATTGGTGTCTTGTCTGAAGACAAGAAGAAGTTGGATTATGTCTTGGCTTTGAAG
GTTGAAGATTTCTTGGAAAGAAGATTGCAAACCCAAGTCTACAAGTTGGGTTTGGCCAAG
TCTGTTCACCACGCTAGAGTCTTGATCTCCCAAAGACACATTGCTGTTGGTAAGCAAATC
GTCAACATCCCATCTTTCATGGTCAGATTGGAATCTGAGAAGCACATTGACTTCGCTAGA
ACCTCTCCATTCGGTGGTGCTAGACCAGGTAGAGTGGCCAGAAAGAGAGCTGCTGCTGCT
GGTGGTGAAGAAGCTGACGAAGAATAA

>KLLA0E23673g.aa
MPRAPRTYSKTYSTPKRPYESARLDAELKLAGEYGLKNKREIYRISFQLSKIRRAARDLL
TRDEKDPKRLFEGNALIRRLVRIGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAK
SVHHARVLISQRHIAVGKQIVNIPSFMVRLESEKHIDFARTSPFGGARPGRVARKRAAAA
GGEEADEE*

Legend and notes

Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences

Color	Nucleotide sequence and Coding sequence	Predicted translation product
RED	start and stop codons	Initial methionine and sequence end
BLUE	coding sequence	protein sequence
grey	non-coding sequence (upstream, downstream or intron)
grey	donor and acceptor splicing sites

Genetic Elements

KLLA0E23760g