KLLA0D02134g

highly similar to uniprot|P40970 Saccharomyces cerevisiae YDR062W LCB2 Component of serine palmitoyltransferase, responsible along with Lcb1p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine

Genomic environment map

Element type: CDS
Element length: 1689 nucleotides,
on anti-sense strand of
Klla0D: complement(182345..184033).
Other names:
KLLA-ORF6588
Coding sequence: 563 codons.

Database cross references:
EMBL: CR382124
EMBL: U15646
GeneID: 2892894
HOGENOM: P48241

Computed results

None available yet

Homologs and Orthologs

Génolevures family GL3C0100
Consensus family of 28 members, scrltkgdy (3 3 3 3 3 3 3 3 4)
28-member family, phyletic pattern sczltkgdy, profile (3 3 3 3 3 3 3 3 4)
Proteins: SACE0D06688p SACE0D10252p SACE0M10164p CAGL0B02607p CAGL0G00440p CAGL0G05071p ZYRO0A10032p ZYRO0D07282p ZYRO0G09152p SAKL0H01144p SAKL0H12364p SAKL0H19272p KLTH0B09306p KLTH0E10538p KLTH0H07920p KLLA0A09955p KLLA0C15059p KLLA0D02134p ERGO0B02486p ERGO0B08624p ERGO0G11220p DEHA2B05478p DEHA2E02134p DEHA2F24926p YALI0C03179p YALI0C06083p YALI0E17545p YALI0F15345p
Search in: Génolevures Google

Génolevures family GL3C0100.F3
Five-SONS subgroup of a Consensus family
4-member family, phyletic pattern --zltk---, profile (0 0 1 1 1 1 0 0 0)
Proteins: ZYRO0G09152p SAKL0H19272p KLTH0H07920p KLLA0D02134p
Search in: Génolevures Google

Génolevures family GL3C0100.N1
Nine-SONS subgroup of a Consensus family
8-member family, phyletic pattern sczltk-dy, profile (1 1 1 1 1 1 0 1 1)
Proteins: SACE0D06688p CAGL0G05071p ZYRO0G09152p SAKL0H19272p KLTH0H07920p KLLA0D02134p DEHA2F24926p YALI0C06083p
Search in: Génolevures Google

Génolevures element ZYRO0G09152g
highly similar to uniprot\|P40970 Saccharomyces cerevisiae YDR062W LCB2 Component of serine palmitoyltransferase, responsible along with Lcb1p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine
Other name: ZYRO-ORF1167
Orthologs: SAKL0H19272g KLTH0H07920g KLLA0D02134g
Homologs: in families GL3C0100 GL3C0100.F3 GL3C0100.N1
Search in: Génolevures EMBL Google by name Google by description

Génolevures element SAKL0H19272g
highly similar to uniprot\|P40970 Saccharomyces cerevisiae YDR062W LCB2 Component of serine palmitoyltransferase, responsible along with Lcb1p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine
Other name: SAKL-ORF728
Orthologs: ZYRO0G09152g KLTH0H07920g KLLA0D02134g
Homologs: in families GL3C0100 GL3C0100.F3 GL3C0100.N1
Search in: Génolevures EMBL Google by name Google by description

Génolevures element KLTH0H07920g
highly similar to uniprot\|P40970 Saccharomyces cerevisiae YDR062W LCB2 Component of serine palmitoyltransferase, responsible along with Lcb1p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine
Other name: KLTH-ORF1169
Orthologs: ZYRO0G09152g SAKL0H19272g KLLA0D02134g
Homologs: in families GL3C0100 GL3C0100.F3 GL3C0100.N1
Search in: Génolevures EMBL Google by name Google by description

Homologs in protein families: GL3C0100 GL3C0100.F3 GL3C0100.N1
Orthologs by synteny: ZYRO0G09152g SAKL0H19272g KLTH0H07920g

Protein KLLA0D02134p

highly similar to uniprot|P40970 Saccharomyces cerevisiae YDR062W LCB2 Component of serine palmitoyltransferase responsible along with Lcb1p for the first committed step in sphingolipid synthesis which is the condensation of serine with palmitoyl-CoA to form 3- ketosphinganine

Protein domain map

Protein length: 562 amino acids
Protein family: GL3C0100

Database cross references:
Gene3D: G3DSA:3.40.640.10
Gene3D: G3DSA:3.90.1150.10
HSSP: P07912
InterPro: IPR001917
InterPro: IPR004839
InterPro: IPR015421
InterPro: IPR015422
KEGG: kla:KLLA0D02134g
PIR: JC5182
PROSITE: PS00599
Pfam: PF00155
RefSeq: XP_453163.1
UniProtKB/Swiss-Prot: P48241
UniprotKB: LCB2_KLULA

Computed results for KLLA0D02134p

Blastp Genolevures

Blastp Uniprot

Gene Ontology terms

None available yet

Sequence data

>KLLA0D02134g.nt
TGTTGACCACGGCGTTCCTAGAAGAACCGGAAGCACTAACTTCTTTGACATTAATAAAAG
GATTGGTCTTTCTTCGCCAGAGATGCACGCTCTCTTTTTGAAGAACGCTGGTGACCTCTC
TGTGTTAGAAACAGTGGCATCAGGGTTCCATGCAGTCAGTTCCAACAACTTTTTAAAAGC
GCATAACACACTTACAGACGAACAGAAAAGAATTGTTGATATGTATATCGATTATTTCCA
TTTGGACCCGAAGAAAACATTCGCATCCCTATCTGTTAGCGAACAGAAGATTGCATTATT
CGTTAGGGCTGCGGTTAAGATGCCGGAAATTATGATACTTGACGAAGCGTTCTCCGGAAC
AGAGACTGATCAACTCATAAGGGCCCATGAGTTCCTCGAGCAATGGCCAGGAACTGTTTT
TGTCGTATCGCATGTTCAGGAAGAGACACCAAAATGCAATCACTACCTAAGATTAATCGA
ACCTGGACAATACGAAATCGGAGACGTCAATTGATTGTATATTAATATTCAAATAACATA
TGTAATTCCGCTTCACAATGCCCACTGCATTCCTTATGGATACATCTTCATCATTGTCTA
CTTGCCGTAAAGGGTGAAGTTTGAACTGTATCACGTGATCTGCATCATCCCATTTCGAAA
ACCAATAAACTTCAAATCAATACATTTCGAACCTGAGTGCTTTAAGAATTGAAATGATAC
AGGGAAAAAGATTAGACGGGCTTGGGAAGTGCAATCAAGTACAATTGATACGTCATACAG
GGCGGTTGAAGTTTAAACGAGTGACTGCTTAAATCTGTGTTGTGCTGTTGTTCTTTAGCT
GACTGTAAAGTGTTTTTATCCATATCCTTATAAGCAAAAACATTGGTTTCCGTCTTAGCA
CTATATTTGTGGTGGCTATCTCTCTTTGATTCTCCCTGCATTTCTGCTCGTTTTTGTTGA
TTATAGTGGTATTGGCTTGTTTGTATTCTCTGTTGGCAAGATGATCAGTATCTCTAGTAC
GCGTGTCCCGTTAATTCCTCCTGAGGATATTCCGCTAGAGGATAAGAAGGAGAACGAATT
TGGTCAGTTGACATCAGAAGAGTATTTGTATCAAAGTAAGTCCAGGGATGGTAAGGCATT
ACAGGACCCGATATTAGATGCTCCCGCTTATCATGTTTCATTGATTACTTATTTGAACTA
TCTTATTTTGATTATACTAGGCCATATCCATGATTTCTTAGGTCTTACCTTCCAGAAGGA
AAAGCATAAGGATATTATGGAACAAGATGGGTTAGCACCCTGGTTCTCCACATTTGAGAG
TTTTTACGTCAGAAGGTTGAAGCAAAGAATTGACGATTGCTTCTCTAGACCTACTACTGG
CGTACCTGGAAGATTCATCCGCTGCTTAGACCGTGTCTCTCACAACTTGAACGACTACTT
CACGTATCCTGGTACTACATCAATGTGTCTAAATCTTTCCTCGTACAACTACTTAGGTTT
TGCACAATCAGAGGGTCAATGTACCACTGCAGCGCTAGAAGCCACCGATAAATACGGTGT
TTATTCTGGTGGTCCAAGGACCAGAATTGGTACTACTGATTTGCACGTCATGACCGAAAA
ATACGTCGCACAATTCGTAGGTAAAGAAGATGCAATTTTGTTCTCTATGGGGTACGGTAC
CAATGCTAATTTCTTCAATTCGTTCTTAGATAGCAAATGTTTGGTTATCTCTGATTCTTT
AAATCATACCTCTATTAGAACTGGTGTCCGTTTATCAGGAGCAGCTGTTAAGACATTCAA
GCATAATGATATGCGCGCATTAGAGAAGTTGATCCGTGAACAAATTGTTCAAGGTCAATC
GAAGACTCATCGTCCTTGGAAAAAAATTATCATTTGTGTGGAAGGTTTATACTCCATGGA
GGGTACCATGGCTAACTTGCCTAAGCTTGTTGAATTGAAGAAAAAATATAAATGCTACCT
TTTCGTTGATGAGGCTCACTCTATCGGTGCAATGGGTCCATCTGGACGTGGTGTATGCGA
TTTCTTTGGGATACCTTGTAGTGATATTGATATTATGATGGGCACACTTACGAAATCTTT
TGGTGCCGCTGGTGGATACATTGCTGCTGACAAATGGATCATCGACAGATTTAGATTGGA
TTTAACAACACCTCACTATGGAGAGCCTACTCCGGCTCCTGTGTTGGCCCAAATCGCTTC
ATCTTTAAAGACCATTACGGGAGACATCAACCCTGGCGAAGGTCAAGAAAGATTACAACG
TATTGCATTCAACGCTCGTTATCTACGACTTGCGCTTCAAAGGTTAGGCTTCATTGTTTA
CGGTATTGCCGATTCTCCGGTCATTCCTATGCTATTATACGCACCAAGTAAAATGCCTGC
ATTCTCCCGAATGATGCTGCAACGGAAAATTGCAGTGGTTGTTGTCGCATACCCAGCCAC
CCCATTGATCGAGTCGAGAGTCCGCTTCTGTGTATCTGCGGCTCTAACAAAAGAAGATAT
CGATTATTTATTACAGCATATCAATGAGGTTGGAGATAAGCTCTTCTTAAAAGTGTCCAG
TGGAAAAGCAGGCGGGTCATTAGATGGCAAACCTCCAAGGTGGAATATTGATGAAGTCAT
TAAGAGAACACCTACTGACTGTAAGGACGATAGCTTCTTCAGAATATGATTAACTTCGTC
CGGTATTCAGGTCTTTTATTTTTGTTGACCTATTGATAGTATTTTCACCAGTTTACCTCA
CAATTAATCAAACCTGTCCGTCATTCAGACATCTGTTTTTATATGATGATCTTCCTAGCA
TTCGTGGTCCTAATTCGCTATTCTTATCGGTCGGCAGCCGTCTTTATACGTCCAAGGACA
TACTCATCACAAGATCACAGTAACTATAATTATTCATAACCATCATATACACTCAAACAT
AAAGATTTCAATTTTAAACACACATAGTATGTAAAAGAACTTCTCAAGC

>KLLA0D02134g.cds
ATGATCAGTATCTCTAGTACGCGTGTCCCGTTAATTCCTCCTGAGGATATTCCGCTAGAG
GATAAGAAGGAGAACGAATTTGGTCAGTTGACATCAGAAGAGTATTTGTATCAAAGTAAG
TCCAGGGATGGTAAGGCATTACAGGACCCGATATTAGATGCTCCCGCTTATCATGTTTCA
TTGATTACTTATTTGAACTATCTTATTTTGATTATACTAGGCCATATCCATGATTTCTTA
GGTCTTACCTTCCAGAAGGAAAAGCATAAGGATATTATGGAACAAGATGGGTTAGCACCC
TGGTTCTCCACATTTGAGAGTTTTTACGTCAGAAGGTTGAAGCAAAGAATTGACGATTGC
TTCTCTAGACCTACTACTGGCGTACCTGGAAGATTCATCCGCTGCTTAGACCGTGTCTCT
CACAACTTGAACGACTACTTCACGTATCCTGGTACTACATCAATGTGTCTAAATCTTTCC
TCGTACAACTACTTAGGTTTTGCACAATCAGAGGGTCAATGTACCACTGCAGCGCTAGAA
GCCACCGATAAATACGGTGTTTATTCTGGTGGTCCAAGGACCAGAATTGGTACTACTGAT
TTGCACGTCATGACCGAAAAATACGTCGCACAATTCGTAGGTAAAGAAGATGCAATTTTG
TTCTCTATGGGGTACGGTACCAATGCTAATTTCTTCAATTCGTTCTTAGATAGCAAATGT
TTGGTTATCTCTGATTCTTTAAATCATACCTCTATTAGAACTGGTGTCCGTTTATCAGGA
GCAGCTGTTAAGACATTCAAGCATAATGATATGCGCGCATTAGAGAAGTTGATCCGTGAA
CAAATTGTTCAAGGTCAATCGAAGACTCATCGTCCTTGGAAAAAAATTATCATTTGTGTG
GAAGGTTTATACTCCATGGAGGGTACCATGGCTAACTTGCCTAAGCTTGTTGAATTGAAG
AAAAAATATAAATGCTACCTTTTCGTTGATGAGGCTCACTCTATCGGTGCAATGGGTCCA
TCTGGACGTGGTGTATGCGATTTCTTTGGGATACCTTGTAGTGATATTGATATTATGATG
GGCACACTTACGAAATCTTTTGGTGCCGCTGGTGGATACATTGCTGCTGACAAATGGATC
ATCGACAGATTTAGATTGGATTTAACAACACCTCACTATGGAGAGCCTACTCCGGCTCCT
GTGTTGGCCCAAATCGCTTCATCTTTAAAGACCATTACGGGAGACATCAACCCTGGCGAA
GGTCAAGAAAGATTACAACGTATTGCATTCAACGCTCGTTATCTACGACTTGCGCTTCAA
AGGTTAGGCTTCATTGTTTACGGTATTGCCGATTCTCCGGTCATTCCTATGCTATTATAC
GCACCAAGTAAAATGCCTGCATTCTCCCGAATGATGCTGCAACGGAAAATTGCAGTGGTT
GTTGTCGCATACCCAGCCACCCCATTGATCGAGTCGAGAGTCCGCTTCTGTGTATCTGCG
GCTCTAACAAAAGAAGATATCGATTATTTATTACAGCATATCAATGAGGTTGGAGATAAG
CTCTTCTTAAAAGTGTCCAGTGGAAAAGCAGGCGGGTCATTAGATGGCAAACCTCCAAGG
TGGAATATTGATGAAGTCATTAAGAGAACACCTACTGACTGTAAGGACGATAGCTTCTTC
AGAATATGA

>KLLA0D02134g.aa
MISISSTRVPLIPPEDIPLEDKKENEFGQLTSEEYLYQSKSRDGKALQDPILDAPAYHVS
LITYLNYLILIILGHIHDFLGLTFQKEKHKDIMEQDGLAPWFSTFESFYVRRLKQRIDDC
FSRPTTGVPGRFIRCLDRVSHNLNDYFTYPGTTSMCLNLSSYNYLGFAQSEGQCTTAALE
ATDKYGVYSGGPRTRIGTTDLHVMTEKYVAQFVGKEDAILFSMGYGTNANFFNSFLDSKC
LVISDSLNHTSIRTGVRLSGAAVKTFKHNDMRALEKLIREQIVQGQSKTHRPWKKIIICV
EGLYSMEGTMANLPKLVELKKKYKCYLFVDEAHSIGAMGPSGRGVCDFFGIPCSDIDIMM
GTLTKSFGAAGGYIAADKWIIDRFRLDLTTPHYGEPTPAPVLAQIASSLKTITGDINPGE
GQERLQRIAFNARYLRLALQRLGFIVYGIADSPVIPMLLYAPSKMPAFSRMMLQRKIAVV
VVAYPATPLIESRVRFCVSAALTKEDIDYLLQHINEVGDKLFLKVSSGKAGGSLDGKPPR
WNIDEVIKRTPTDCKDDSFFRI*

Legend and notes

Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences

Color	Nucleotide sequence and Coding sequence	Predicted translation product
RED	start and stop codons	Initial methionine and sequence end
BLUE	coding sequence	protein sequence
grey	non-coding sequence (upstream, downstream or intron)
grey	donor and acceptor splicing sites

Genetic Elements

KLLA0D02134g

KLLA0D02134g

Genomic environment map

Computed results

Homologs and Orthologs

Protein KLLA0D02134p

Protein domain map

Computed results for KLLA0D02134p

Gene Ontology terms

Sequence data

Nucleotide sequence

Coding sequence

Predicted translation product

Legend and notes