HomeKLLA0A09955g
similar to uniprot|P25045 Saccharomyces cerevisiae YMR296C LCB1 Component of serine palmitoyltransferase, responsible along with Lcb2p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine
Element type: CDS
Element length: 1668 nucleotides,
on anti-sense strand of
Klla0A: complement(873688..875355).
Other names:
KLLA-ORF10158
Coding sequence: 556 codons.
Element length: 1668 nucleotides,
on anti-sense strand of
Klla0A: complement(873688..875355).
Other names:
KLLA-ORF10158
Coding sequence: 556 codons.
Database cross references:
EMBL: CR382121
GeneID: 2896379
HOGENOM: Q6CXA4
Orthologs by synteny: ZYRO0D07282g SAKL0H01144g KLTH0B09306g ERGO0B08624g
EMBL: CR382121
GeneID: 2896379
HOGENOM: Q6CXA4
Homologs and Orthologs
Homologs in protein families: GL3C0100 GL3C0100.F1 GL3C0100.N6Orthologs by synteny: ZYRO0D07282g SAKL0H01144g KLTH0B09306g ERGO0B08624g
Protein KLLA0A09955p 
similar to uniprot|P25045 Saccharomyces cerevisiae YMR296C LCB1 Component of serine palmitoyltransferase responsible along with Lcb2p for the first committed step in sphingolipid synthesis
Protein domain map
Database cross references:
Gene3D: G3DSA:3.40.640.10
InterPro: IPR004839
InterPro: IPR015421
KEGG: kla:KLLA0A09955g
Pfam: PF00155
RefSeq: XP_451435.1
UniProtKB/TrEMBL: Q6CXA4
UniprotKB: Q6CXA4_KLULA
Gene3D: G3DSA:3.40.640.10
InterPro: IPR004839
InterPro: IPR015421
KEGG: kla:KLLA0A09955g
Pfam: PF00155
RefSeq: XP_451435.1
UniProtKB/TrEMBL: Q6CXA4
UniprotKB: Q6CXA4_KLULA
Gene Ontology terms
| GO:0030170 | pyridoxal phosphate binding |
| GO:0016769 | transferase activity, transferring nitrogenous groups |
| GO:0009058 | biosynthetic process |
Sequence data
>KLLA0A09955g.nt TACCTTTAGCGTCTTTTAGCCTTTTCCCTTTTATAGTCGCAAGATCTCAATTTTCAAGGG GGGCGGCAAAAAGACGATAGGTTACCCGGTATATCCGGGTAACATTGACACATTTCAATA CGCTAACACTGTTGAATGGTTACGGTAGCTATGTTATATTATACTATGTTACAGGAGGGC ATGAGAGGTTATAGCCGTCTGGATTGCAGGTTGTGTCTGCAATTTGCAACCTATAATGCA GATATTGCCGCAAAACAACCAAGATTTAAACCCAGCACACAGCATTCAGCCCAGTACGAT GCTGTTTGTTATCACTTTGAACGTACCTGTCATTTATACTATTACCCGGGTTTCACGTGA CCGGTAGTTCTAGATTCCGTATTGCCGTGTTGGTAATATGTGGTGTCTGGGTTTGTACAT CCCCATAAATAAAAATAAAGTACTATGTAACCAAGAATACATCGCAACTGCCCCATTGAT TGGTGTCATCTAACTCCCATTCGTCTTGCTAATGCTTTTCCTTGTATTAGATCCTCTAGA CCTGCGCCCTTCGAGGCTACTGCTCCCTCTTTTCTCTCTGTTCCTAAGTTTCGATAAAAA CTGTTTGAAAGCCTAAAGATATTGTGAACAAACATACAAACATACAAATACACAATATAG ATTTAAAGAAAGGTAGAGAAAACAATTGTTATCCAGTTCCACATCGCACGAGACCGGTAC TAACAAGAGCTTTTTGATCAGTGTTGGTGAGAATCTTTATCCTATACAACACAGGGGCGT ACCGTTTTTTGTTTTGTTTCTGAATTTCGATATCTGTTGAAGATTCGATTTAGAATCCAA GAAACCCGTTCTTAAAACGAACGATAAATCTACCAATCGCTTTTCCCCTTCACCTTAAGA CTGGATTTTGTACCATCTATCATATTTATTTTGTTTTGATACTTTTCTGACATTTCAAAG ATAATCATAGTTGTAAATTACCAAGAGAACGCCAGTATTGATGATAGATTCCGTTAATGT CCCTGAAGTCTTACCAAGTAGTATCCCTGTACCTTCAGCAGTGATCAGCTCTGCTTCGTA CCTATGGTTCTATTTCATTACTTTCTTCAAATTGATTCCCGGTGCTCATTATGTGATAGA TTACGTTGAAAAATCTCATCAAGATGATCCATATAGAACGTTCGTTGAAGTTCTCTTGAT CCTTTACAGTATCGTTTACTTCTTGAGCAAGCCTAAGAAGAAAGGTGCTGTGGATCAACC AAAGTTGAGTGAGAAAGAGATCGATAACTTGATTGAAGAATGGGAACCGGAACCGATCGT GGTGCCAGATGAAAGAAACGAGTGGAGATTGGCAAAGATCCCGGTAATCGAGGGTTCTGG TGCTGATAACGTTATCAATATCACTCGTGATAACGGTAAAGAGGCGTATGCATCCGCGTT CAATTTGTGTTCATTCAATTTCTTACAGCTTTCAAAACACCCAAGAGTCGTTGAGATCGC AAAGGAAATTATCAAAAATTACGGTGTTGGTTCTTGTGGGCCTGCAGGGTTCTACGGTAA CGAAGACGTTCATTATAATTTGGAATACGATTTAGCATCGTTCTTTGGTACCGAAAACTC GGTTCTCTACGGTCAGGATTTCTGTGTATCATCAAGTGTCATCCCAGCTTTCACAAAGCG TGGCGATGTCATTGTTGCCGACGATAAGATCTCTGTCAGTTCCCAAAACGCATTGCAATT GAGTAGATCTACAGTTTATTACTACAAACACAACGACATGGCATCTTTGGAGAACTTATT GCATGAATTGGACGAAGCTGAGAAGAAAGAGAAGTTACCTGCGATCCCACGTAAATTCAT CGTCACCGAAGGGATCTTCCATCGTACCGGTGAAATTGCTCCGCTACCAGAGTTAGTCCA ATTGAAGAGGAAATACAAATACAGATTATTTATCGATGAAACTTTCTCCATCGGTGTTCT AGGTGCCACTGGTCGTGGTCTAACCGAGTATTACAACATCAACCGTGCCACCAGTATCGA CATCACCGTAGGATCCCTTGCCACTGCCATCGGGTCCTCCGGTGGGTTCGTCCTGGGAGA CAACGTCATGGTGCGTCACCAACGTATCGGTTCCAATGCATACTGTTTCTCTGCATCATT ACCCCCATACGCAGTGAGAACAGCCTCCACTGTACTACAGATGATGGACGAGGACAATTC ATCAGTGACAAAATTACGCTATTTATCGAACAAATTGCATGAATGGTTCCAAACAGACAC AGAATTGCTAAGATACATCGAGGTAACATCGCATCGGGACTCAAGCGTACTCCATTTCCA ACTCACCGACGCTCAACGTCAACAGAAATTCGGATCCTCCATTGAATCCGTCTTCCAAGA ATCCCAATACCAACAACAACACTGTATCTCAGACCATTTCGTGGAATCTTGGGAAAAGGA AGAAATATTCTTACAAGCCATAGTCGACACCGTACTAATCGACGGAAACATCTTGATCTC AAGAGATACCATCGTTCTAAAACAAGAAACCTTACCAGTCACACCAAACATCAGCATATG CTGTAATTCTTCCATGGAAGAATCACAACTACTCGATGCATACAACGTCATCAGAATAGC AATCATCAAGCATTGTTCCGAAGCATGAAAAATTCTTTTCCCCTGATCTTTTTTTACCCC ATCATCGTCAAGTACAGTATTCTATTTTAGAACTATTACTACTACTATATACTCAACATA TATCAATATCTAAAAACACACGTATTTCCACACAATCCAAAAATACCAGCCTTCTCCATA CATGCCGCATTGACACAATCGTATTTTCTACAAACCTTCTGAACTTATCAGCCGTCCGAA GTGGCTGAGTTTGCGAAACTTTTCCATTCCTCTCTCGCATTGCATGATTCAAATCTTCAT CAGTCTCGGCCTTTTGGACAAAAATCTT
>KLLA0A09955g.cds ATGATAGATTCCGTTAATGTCCCTGAAGTCTTACCAAGTAGTATCCCTGTACCTTCAGCA GTGATCAGCTCTGCTTCGTACCTATGGTTCTATTTCATTACTTTCTTCAAATTGATTCCC GGTGCTCATTATGTGATAGATTACGTTGAAAAATCTCATCAAGATGATCCATATAGAACG TTCGTTGAAGTTCTCTTGATCCTTTACAGTATCGTTTACTTCTTGAGCAAGCCTAAGAAG AAAGGTGCTGTGGATCAACCAAAGTTGAGTGAGAAAGAGATCGATAACTTGATTGAAGAA TGGGAACCGGAACCGATCGTGGTGCCAGATGAAAGAAACGAGTGGAGATTGGCAAAGATC CCGGTAATCGAGGGTTCTGGTGCTGATAACGTTATCAATATCACTCGTGATAACGGTAAA GAGGCGTATGCATCCGCGTTCAATTTGTGTTCATTCAATTTCTTACAGCTTTCAAAACAC CCAAGAGTCGTTGAGATCGCAAAGGAAATTATCAAAAATTACGGTGTTGGTTCTTGTGGG CCTGCAGGGTTCTACGGTAACGAAGACGTTCATTATAATTTGGAATACGATTTAGCATCG TTCTTTGGTACCGAAAACTCGGTTCTCTACGGTCAGGATTTCTGTGTATCATCAAGTGTC ATCCCAGCTTTCACAAAGCGTGGCGATGTCATTGTTGCCGACGATAAGATCTCTGTCAGT TCCCAAAACGCATTGCAATTGAGTAGATCTACAGTTTATTACTACAAACACAACGACATG GCATCTTTGGAGAACTTATTGCATGAATTGGACGAAGCTGAGAAGAAAGAGAAGTTACCT GCGATCCCACGTAAATTCATCGTCACCGAAGGGATCTTCCATCGTACCGGTGAAATTGCT CCGCTACCAGAGTTAGTCCAATTGAAGAGGAAATACAAATACAGATTATTTATCGATGAA ACTTTCTCCATCGGTGTTCTAGGTGCCACTGGTCGTGGTCTAACCGAGTATTACAACATC AACCGTGCCACCAGTATCGACATCACCGTAGGATCCCTTGCCACTGCCATCGGGTCCTCC GGTGGGTTCGTCCTGGGAGACAACGTCATGGTGCGTCACCAACGTATCGGTTCCAATGCA TACTGTTTCTCTGCATCATTACCCCCATACGCAGTGAGAACAGCCTCCACTGTACTACAG ATGATGGACGAGGACAATTCATCAGTGACAAAATTACGCTATTTATCGAACAAATTGCAT GAATGGTTCCAAACAGACACAGAATTGCTAAGATACATCGAGGTAACATCGCATCGGGAC TCAAGCGTACTCCATTTCCAACTCACCGACGCTCAACGTCAACAGAAATTCGGATCCTCC ATTGAATCCGTCTTCCAAGAATCCCAATACCAACAACAACACTGTATCTCAGACCATTTC GTGGAATCTTGGGAAAAGGAAGAAATATTCTTACAAGCCATAGTCGACACCGTACTAATC GACGGAAACATCTTGATCTCAAGAGATACCATCGTTCTAAAACAAGAAACCTTACCAGTC ACACCAAACATCAGCATATGCTGTAATTCTTCCATGGAAGAATCACAACTACTCGATGCA TACAACGTCATCAGAATAGCAATCATCAAGCATTGTTCCGAAGCATGA
>KLLA0A09955g.aa MIDSVNVPEVLPSSIPVPSAVISSASYLWFYFITFFKLIPGAHYVIDYVEKSHQDDPYRT FVEVLLILYSIVYFLSKPKKKGAVDQPKLSEKEIDNLIEEWEPEPIVVPDERNEWRLAKI PVIEGSGADNVINITRDNGKEAYASAFNLCSFNFLQLSKHPRVVEIAKEIIKNYGVGSCG PAGFYGNEDVHYNLEYDLASFFGTENSVLYGQDFCVSSSVIPAFTKRGDVIVADDKISVS SQNALQLSRSTVYYYKHNDMASLENLLHELDEAEKKEKLPAIPRKFIVTEGIFHRTGEIA PLPELVQLKRKYKYRLFIDETFSIGVLGATGRGLTEYYNINRATSIDITVGSLATAIGSS GGFVLGDNVMVRHQRIGSNAYCFSASLPPYAVRTASTVLQMMDEDNSSVTKLRYLSNKLH EWFQTDTELLRYIEVTSHRDSSVLHFQLTDAQRQQKFGSSIESVFQESQYQQQHCISDHF VESWEKEEIFLQAIVDTVLIDGNILISRDTIVLKQETLPVTPNISICCNSSMEESQLLDA YNVIRIAIIKHCSEA*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/KLLA/KLLA0A09955p