ERGO0E06380g

AGOS_AEL081W, Syntenic homolog of Saccharomyces cerevisiae YBR026C (ETR1)

Genomic environment map

Element type: CDS
Element length: 1131 nucleotides,
on sense strand of
Ergo0E: 476365..477495.
Other names:
AEL081W
AGOS_AEL081W
Coding sequence: 377 codons.

Database cross references:
EMBL: AE016818
GeneID: 4620970
GenomeReviews: AE016818_GR
HOGENOM: HBG753318
NMPDR: fig|33169.1.peg.2425

Computed results

None available yet

Homologs and Orthologs

Génolevures family GL3C0928
Consensus family of 12 members, sczltkgdpy (1 1 1 1 1 1 1 2 2 1)
12-member family, phyletic pattern sczltkgdy, profile (1 1 1 1 1 1 1 2 1)
Proteins: YALI0C19624p PISO0L18051p PISO0K18050p DEHA2F10362p DEHA2C05808p ERGO0E06380p KLLA0F24552p KLTH0C09020p SAKL0C08910p ZYRO0A03916p CAGL0B04323p SACE0B03124p
Search in: Génolevures Google

Homologs in protein family: GL3C0928
Orthologs: strict determination not possible; homologs must be refined manually

Protein ERGO0E06380p

Protein domain map

Protein length: 376 amino acids
Protein family: GL3C0928

Database cross references:
AGD: AEL081W
Gene3D: G3DSA:3.40.50.720
InterPro: IPR002085
InterPro: IPR011032
InterPro: IPR013154
InterPro: IPR016040
KEGG: ago:AGOS_AEL081W
PANTHER: PTHR11695
RefSeq: NP_984780.2
UniProtKB/Swiss-Prot: Q757U3
UniProtKB: ETR1_ASHGO

Phylogeny

PhylomeDB:Q757U3

Computed results for ERGO0E06380p

Blastp Genolevures

Blastp Uniprot

Gene Ontology terms

Sequence data

>ERGO0E06380g.nt
ATGCAAGCTCTAAACACTACGAAACGGCTAATGTCTACCAAACAATTTCCATTGTTCAAG
TCACTACTCTATTCGTCGCACGACCCTGCAGACTGCACGCAAGTGCTCAAAGTTCACAGC
TACACCCCGAAGGTGGGAGCCGATGAGTCGATTCTTCTCCGCACGTTGGCGTTCCCAATT
AACCCTTCGGACATCAACCAATTGCAGGGGGTGTATCCCTCGGTGCCCGAGAAAACGTTA
GACTACTCGACCGAAAAGCCGGCCGCAATTGCGGGCAACGAGGGCGTGTTCGAGGTGATG
TCTGTCCCGCAAGGGGAACGCCGGCTGGCTGTTGGCGACTGGGTAATTCCGCTGTACAGC
AACACCGGGACGTGGACAAACTACCAGACATGCCGCGATGCTGGCACGCTGGTTAAGGTT
AACGGGCTGGACCTGTACACGGCGGCAACAATCGCAGTGAATGGCTGCACTGCGTACCAA
CTGGTCAACGACTACGTGCAATGGGATCCATCGGGCAACGAGTGGATCGTGCAGAACGCA
GGAACGTCAGCGGTGTCCAAGATCGTGACGCAGGTGGCCCAGGCGCGCGGCGTCAAAACC
CTCAGTGTGATCCGGGACCGTGAAAACTTTGCAGAAGTAGCCAAGGAGCTGGAAGAGCGC
TATGGGGCTACGAAGGTCATCAGCGAAACCCAAAACAACGACAAGGACTTTTCCAAGGAC
GAATTGCCGGTAATCCTTGGCCCAAACGCGCGCGTCCGCCTCGCGCTGAACTCTGTGGGT
GGAAAATCCAGTGGGGCTATCGCGAGAAAGCTAGAGCGGGATGGTACCATGTTGACCTAC
GGGGGGATGTCCAGGCAGCCTGTGACGGTTCCAACGACGCTCTTAATTTTCAATGGCCTG
AAGTCCTTGGGGTACTGGATCACCGAGAATACGAAGAGAAACCCTCAATCTAAGATCGAC
ACCATATCCGTGCTCATGCGCATGTACGGTGATGGACAGCTGCAGCCTCCAGAGGCCGAC
ATAAAGAAGATTGAGTGGGACGTTCAAAAAATGAATGATGAACAGCTGCTTGAGGCGGTT
AAAAATGGTATCCAAAGCAACGGTAAGAGTGTAGTAGTGCTCAAGTGGTAA

>ERGO0E06380g.cds
ATGCAAGCTCTAAACACTACGAAACGGCTAATGTCTACCAAACAATTTCCATTGTTCAAG
TCACTACTCTATTCGTCGCACGACCCTGCAGACTGCACGCAAGTGCTCAAAGTTCACAGC
TACACCCCGAAGGTGGGAGCCGATGAGTCGATTCTTCTCCGCACGTTGGCGTTCCCAATT
AACCCTTCGGACATCAACCAATTGCAGGGGGTGTATCCCTCGGTGCCCGAGAAAACGTTA
GACTACTCGACCGAAAAGCCGGCCGCAATTGCGGGCAACGAGGGCGTGTTCGAGGTGATG
TCTGTCCCGCAAGGGGAACGCCGGCTGGCTGTTGGCGACTGGGTAATTCCGCTGTACAGC
AACACCGGGACGTGGACAAACTACCAGACATGCCGCGATGCTGGCACGCTGGTTAAGGTT
AACGGGCTGGACCTGTACACGGCGGCAACAATCGCAGTGAATGGCTGCACTGCGTACCAA
CTGGTCAACGACTACGTGCAATGGGATCCATCGGGCAACGAGTGGATCGTGCAGAACGCA
GGAACGTCAGCGGTGTCCAAGATCGTGACGCAGGTGGCCCAGGCGCGCGGCGTCAAAACC
CTCAGTGTGATCCGGGACCGTGAAAACTTTGCAGAAGTAGCCAAGGAGCTGGAAGAGCGC
TATGGGGCTACGAAGGTCATCAGCGAAACCCAAAACAACGACAAGGACTTTTCCAAGGAC
GAATTGCCGGTAATCCTTGGCCCAAACGCGCGCGTCCGCCTCGCGCTGAACTCTGTGGGT
GGAAAATCCAGTGGGGCTATCGCGAGAAAGCTAGAGCGGGATGGTACCATGTTGACCTAC
GGGGGGATGTCCAGGCAGCCTGTGACGGTTCCAACGACGCTCTTAATTTTCAATGGCCTG
AAGTCCTTGGGGTACTGGATCACCGAGAATACGAAGAGAAACCCTCAATCTAAGATCGAC
ACCATATCCGTGCTCATGCGCATGTACGGTGATGGACAGCTGCAGCCTCCAGAGGCCGAC
ATAAAGAAGATTGAGTGGGACGTTCAAAAAATGAATGATGAACAGCTGCTTGAGGCGGTT
AAAAATGGTATCCAAAGCAACGGTAAGAGTGTAGTAGTGCTCAAGTGGTAA

>ERGO0E06380g.aa
MQALNTTKRLMSTKQFPLFKSLLYSSHDPADCTQVLKVHSYTPKVGADESILLRTLAFPI
NPSDINQLQGVYPSVPEKTLDYSTEKPAAIAGNEGVFEVMSVPQGERRLAVGDWVIPLYS
NTGTWTNYQTCRDAGTLVKVNGLDLYTAATIAVNGCTAYQLVNDYVQWDPSGNEWIVQNA
GTSAVSKIVTQVAQARGVKTLSVIRDRENFAEVAKELEERYGATKVISETQNNDKDFSKD
ELPVILGPNARVRLALNSVGGKSSGAIARKLERDGTMLTYGGMSRQPVTVPTTLLIFNGL
KSLGYWITENTKRNPQSKIDTISVLMRMYGDGQLQPPEADIKKIEWDVQKMNDEQLLEAV
KNGIQSNGKSVVVLKW*

Legend and notes

Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences

Color	Nucleotide sequence and Coding sequence	Predicted translation product
RED	start and stop codons	Initial methionine and sequence end
BLUE	coding sequence	protein sequence
grey	non-coding sequence (upstream, downstream or intron)
grey	donor and acceptor splicing sites

Genetic Elements

ERGO0E06380g

ERGO0E06380g

Genomic environment map

Computed results

Homologs and Orthologs

Protein ERGO0E06380p

Protein domain map

Phylogeny

Computed results for ERGO0E06380p

Gene Ontology terms

Sequence data

Nucleotide sequence

Coding sequence

Predicted translation product

Legend and notes