ERGO0D11880g

Syntenic homolog of Saccharomyces cerevisiae YOL093W

Genomic environment map

Element type: CDS
Element length: 891 nucleotides,
on anti-sense strand of
Ergo0D: complement(900968..901858).
Other names:
ADR110C
AGOS_ADR110C
Coding sequence: 297 codons.

Computed results

None available yet

Homologs and Orthologs

Génolevures family GL3R1757
Robust family of 9 members, scrltkgdy (1 1 1 1 1 1 1 1 1)
9-member family, phyletic pattern sczltkgdy, profile (1 1 1 1 1 1 1 1 1)
Proteins: SACE0O01716p CAGL0I07667p ZYRO0B06226p SAKL0C09834p KLTH0C09922p KLLA0C03740p ERGO0D11880p DEHA2B11572p YALI0F12771p
Search in: Génolevures Google

Génolevures family GL3R1757.F1
Five-SONS subgroup of a Robust family
5-member family, phyletic pattern --zltkg--, profile (0 0 1 1 1 1 1 0 0)
Proteins: ZYRO0B06226p SAKL0C09834p KLTH0C09922p KLLA0C03740p ERGO0D11880p
Search in: Génolevures Google

Génolevures family GL3R1757.N1
Nine-SONS subgroup of a Robust family
9-member family, phyletic pattern sczltkgdy, profile (1 1 1 1 1 1 1 1 1)
Proteins: SACE0O01716p CAGL0I07667p ZYRO0B06226p SAKL0C09834p KLTH0C09922p KLLA0C03740p ERGO0D11880p DEHA2B11572p YALI0F12771p
Search in: Génolevures Google

Génolevures element ZYRO0B06226g
similar to uniprot\|Q12400 Saccharomyces cerevisiae YOL093W TRM10 tRNA methyltransferase, methylates the N-1 position of guanosine in tRNAs
Other name: ZYRO-ORF8029
Orthologs: SAKL0C09834g KLTH0C09922g KLLA0C03740g ERGO0D11880g
Homologs: in families GL3R1757 GL3R1757.F1 GL3R1757.N1
Search in: Génolevures EMBL Google by name Google by description

Génolevures element SAKL0C09834g
similar to uniprot\|Q12400 Saccharomyces cerevisiae YOL093W TRM10 tRNA methyltransferase, methylates the N-1 position of guanosine in tRNAs
Other name: SAKL-ORF10180
Orthologs: ZYRO0B06226g KLTH0C09922g KLLA0C03740g ERGO0D11880g
Homologs: in families GL3R1757 GL3R1757.F1 GL3R1757.N1
Search in: Génolevures EMBL Google by name Google by description

Génolevures element KLTH0C09922g
similar to uniprot\|Q12400 Saccharomyces cerevisiae YOL093W TRM10 tRNA methyltransferase, methylates the N-1 position of guanosine in tRNAs
Other name: KLTH-ORF13061
Orthologs: ZYRO0B06226g SAKL0C09834g KLLA0C03740g ERGO0D11880g
Homologs: in families GL3R1757 GL3R1757.F1 GL3R1757.N1
Search in: Génolevures EMBL Google by name Google by description

Génolevures element KLLA0C03740g
similar to uniprot\|Q12400 Saccharomyces cerevisiae YOL093W TRM10 tRNA methyltransferase, methylates the N-1 position of guanosine in tRNAs
Other name: KLLA-ORF8214
Orthologs: ZYRO0B06226g SAKL0C09834g KLTH0C09922g ERGO0D11880g
Homologs: in families GL3R1757 GL3R1757.F1 GL3R1757.N1
Search in: Génolevures EMBL Google by name Google by description

Homologs in protein families: GL3R1757 GL3R1757.F1 GL3R1757.N1
Orthologs by synteny: ZYRO0B06226g SAKL0C09834g KLTH0C09922g KLLA0C03740g

Protein ERGO0D11880p

Protein domain map

Protein length: 296 amino acids
Protein family: GL3R1757

Database cross references:
InterPro: IPR007356
InterPro: IPR016009
InterPro: IPR016653
UniProtKB/Swiss-Prot: Q75A17

Computed results for ERGO0D11880p

Blastp Genolevures

Blastp Uniprot

Gene Ontology terms

None available yet

Sequence data

Nucleotide sequence

>ERGO0D11880g.nt
ATGACTCCTGAAACTAATAATGATGAAACATTGAGTCGGCCAAAACCACGGGCTGCCTTG
CCGCCCGTTCCCGAAGGCATGTCGAAGTCGCAATGGAAGAAACAGTGGAAGAAGGAACAG
TTCGAACTGAATAAGCCGCTGTATGCGAAAATCCGTAAGGAGAAGAAGCAAAAGGCGAGA
GAGCAACGCCGGGAACGCTTACAGAAGGCGCTGGAGGAGAATGGTGGGGAGATCCCAGAG
GAACTGCGGCGCACGCCGCGCGTAAATGTCAACCAAAAGGACTCCGGGATCAAGGTGATC
ATCGACTGTGCTTTCGACGAGCTTATGAACGAAAAAGAGATCGTCAGCTTGTCTACGCAG
ATAACGCGAGCATACTCTGCCAACAAACGAGAAAACCACTTTGCGGACGTAAAGGTAACT
TCGTTCAATAAGCGTCTGAAGGAGCGCTTTGACTGCGGACTCAAGGGGGCCAACTATGAT
GCATGGAAGCACTTCGAGTTCACAGACGAATCCGCCCTTCCAACTACGAACGCAGTTTAC
CTTACTGCAGATACTGATGAGACGCTGGAGACGCTGGAACCCGGTACGACGTATATAGTG
GGCGGCATTGTGGACAAGAACCGCCACAAAGCTCTCTGTTACAATAAGGCCAAAGAACTG
GGCATTCCTACTCGTCGCCTACCAATAGGAGAGTACATCAAGCTATGCGGCAGGAAGGTG
CTGACCACCACCCACGTTATCCAGATCATGCTCAGATACTTTGACAACCATGACTGGAAA
GAGGCGTTTGAAAGTGTTCTGCCCGCCAGGAAGCTAGCAGAGCTTGCAGACCACGCCCAA
GAATCCAATTCCTCTTCGCCAGCAGAAGAACAAGACGCGCAAGATATATAG

Coding sequence

>ERGO0D11880g.cds
ATGACTCCTGAAACTAATAATGATGAAACATTGAGTCGGCCAAAACCACGGGCTGCCTTG
CCGCCCGTTCCCGAAGGCATGTCGAAGTCGCAATGGAAGAAACAGTGGAAGAAGGAACAG
TTCGAACTGAATAAGCCGCTGTATGCGAAAATCCGTAAGGAGAAGAAGCAAAAGGCGAGA
GAGCAACGCCGGGAACGCTTACAGAAGGCGCTGGAGGAGAATGGTGGGGAGATCCCAGAG
GAACTGCGGCGCACGCCGCGCGTAAATGTCAACCAAAAGGACTCCGGGATCAAGGTGATC
ATCGACTGTGCTTTCGACGAGCTTATGAACGAAAAAGAGATCGTCAGCTTGTCTACGCAG
ATAACGCGAGCATACTCTGCCAACAAACGAGAAAACCACTTTGCGGACGTAAAGGTAACT
TCGTTCAATAAGCGTCTGAAGGAGCGCTTTGACTGCGGACTCAAGGGGGCCAACTATGAT
GCATGGAAGCACTTCGAGTTCACAGACGAATCCGCCCTTCCAACTACGAACGCAGTTTAC
CTTACTGCAGATACTGATGAGACGCTGGAGACGCTGGAACCCGGTACGACGTATATAGTG
GGCGGCATTGTGGACAAGAACCGCCACAAAGCTCTCTGTTACAATAAGGCCAAAGAACTG
GGCATTCCTACTCGTCGCCTACCAATAGGAGAGTACATCAAGCTATGCGGCAGGAAGGTG
CTGACCACCACCCACGTTATCCAGATCATGCTCAGATACTTTGACAACCATGACTGGAAA
GAGGCGTTTGAAAGTGTTCTGCCCGCCAGGAAGCTAGCAGAGCTTGCAGACCACGCCCAA
GAATCCAATTCCTCTTCGCCAGCAGAAGAACAAGACGCGCAAGATATATAG

Predicted translation product

>ERGO0D11880g.aa
MTPETNNDETLSRPKPRAALPPVPEGMSKSQWKKQWKKEQFELNKPLYAKIRKEKKQKAR
EQRRERLQKALEENGGEIPEELRRTPRVNVNQKDSGIKVIIDCAFDELMNEKEIVSLSTQ
ITRAYSANKRENHFADVKVTSFNKRLKERFDCGLKGANYDAWKHFEFTDESALPTTNAVY
LTADTDETLETLEPGTTYIVGGIVDKNRHKALCYNKAKELGIPTRRLPIGEYIKLCGRKV
LTTTHVIQIMLRYFDNHDWKEAFESVLPARKLAELADHAQESNSSSPAEEQDAQDI*

Legend and notes

Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences

Color	Nucleotide sequence and Coding sequence	Predicted translation product
RED	start and stop codons	Initial methionine and sequence end
BLUE	coding sequence	protein sequence
grey	non-coding sequence (upstream, downstream or intron)
grey	donor and acceptor splicing sites

Genetic Elements

ERGO0D11880g

ERGO0D11880g

Genomic environment map

Computed results

Homologs and Orthologs

Protein ERGO0D11880p

Protein domain map

Computed results for ERGO0D11880p

Gene Ontology terms

Sequence data

Nucleotide sequence

Coding sequence

Predicted translation product

Legend and notes