DEHA2G14322g


similar to uniprot|P32501 Saccharomyces cerevisiae YDR211W GCD6 Catalytic epsilon subunit of the translation initiation factor eIF2B the guanine-nucleotide exchange factor for eIF2

Genomic environment map

Element type: CDS
Element length: 2193 nucleotides,
on anti-sense strand of
Deha2G: complement(1184630..1186822).
Other names:
DEHA-CDS1031.1
DEHA-IPF4039
DEHA0G15224g
Coding sequence: 731 codons.
Database cross references:
EMBL: CR382139
GeneID: 2905077
GenomeReviews: CR382139_GR
HOGENOM: HBG445046

Computed results  

None available yet


Homologs and Orthologs

Homologs in protein family: GL3C0213
Orthologs: strict determination not possible; homologs must be refined manually

Protein DEHA2G14322p  


similar to uniprot|P32501 Saccharomyces cerevisiae YDR211W GCD6 Catalytic epsilon subunit of the translation initiation factor eIF2B the guanine-nucleotide exchange factor for eIF2; SubName: Full=DEHA2G14322p;

Protein domain map

Protein length: 730 amino acids
Protein family: GL3C0213
Database cross references:
Gene3D: G3DSA:1.25.40.180
InterPro: IPR001451
InterPro: IPR003307
InterPro: IPR005835
InterPro: IPR011004
InterPro: IPR016021
InterPro: IPR016024
KEGG: dha:DEHA2G14322g
PROSITE: PS51363
Pfam: PF00132
Pfam: PF00483
Pfam: PF02020
RefSeq: XP_462161.2
SMART: SM00515
UniProtKB/TrEMBL: Q6BI10
UniProtKB: Q6BI10_DEBHA

Computed results for DEHA2G14322p  

Blastp Genolevures
Blastp Uniprot

Gene Ontology terms  


Sequence data  


Nucleotide sequence    

>DEHA2G14322g.nt
ATGGCTCCAAAGAATAAGAAGCAAAAGGAAATCGTTCAGGATGACCGTTTCCAAGCGATT
GTCTTAACTGATTCGTTTGAAACCAGATTCATGCCATTGACGTCTATTCTACCAAGATGC
TTATTACCTTTAGCGAACGTCCCATTAATTGAATATACATTGGAATTCTTAGCTAATGCT
GGGGTCAATGAAGTGTACTTAATGTGCTCTTCTCATGCTGACCAAATCCAAGAATACATT
GAAAAGTCCAAATGGTCATCGAAAAACTCACCTTTCAAGATAAGTACCATAATGTCTTTA
GAATCCAGGTCAGTGGGAGATGCTATGAGAGATTTAGATAATAGAGGGTTGATTTCTGGT
GATTTCTTGTTGGTTTCTGGTGATGTGGTGACTAATATCGATTTTGAAAAGGCCATGAAT
GCCCATAAGCAAAGAAAGCAGATGGATAAAGACCATATTGTAACAATGGTATTAACGCCT
GCTAGTCCATTGCATCGTACAAGATCACAAGTTGACCCTGCTACATTCATTTTGGATAAG
AATACTGGAAGATGTGTATTTTACCAAGGAATTCCACCGGTTGACGGTAAGAGAAGCAGC
ATAAATATTGATCCCGAATTATTAGAGGATATCGAAGACGAAATGGTAATTAGAAATGAT
TTAATTGATTGCTGTGTTGATATCTGTTCGCCACATGTTCCACAAATTTTTCAAGAGAAT
TTTGATTACCAATATTTGAGAAGTGATTTTGTTAAAGGTGTTTTGACATCTGATTTATTG
AAGAAAACTATTTATGCATATATAACTGATGGATCTGAATATGCAGCAAGAGTAGAAAGT
TGGGCAACCTATGATGCTGTTTCACAGGATGTCTTAGCTAGGTGGTGTTATCCGTTAGTT
CCTGATTCAAACTTGTTGGAAAGCAATTCTTATAGTTATGAATTCAATCATATTTATAAA
GAGGATAAGGTTATTTTGGCACAATCGTGCAAAATAGGCAGTTGTACATCCATTGGTACT
AATTCATCTGTGGGAGAAGGTACATCAATTAAGAAGTCCGTTATTGGAAGAAACTGTCAA
ATTGGTAATAATGTAACTATCAACAACTCTTACATTTGGGATAATGCTATAATTAAAGAT
GACTCAGTTGTTGATCACAGTATCATTGCTGGTAATGCTGAAATTGGTAGTGGCGCTACT
TTAAGTCCAGGAACAGTCATTGGTTATAATGTAGTTATTGGTGATGGCATTCATCTTTCA
AATAACACAAGGATCGTGGAAAAGCCAATTGATAGAGATGATGAATCTTTTGAACTGAGT
CGTTCATTTGATAGTGAGCAGGAAGACGGAAAGACTAATGGTGGTGAATATATCAATGCC
GATCAAAGTGTAAATGACATAGACGTGGTCGGCGACAATGGTGTTGGCTTCTTATATGTG
TCAGACAATGAATTGGATGAGGAATCTGATTCAGAATATGGCGTATCTCATAACTACTCT
GGTATAATTTATCAGATGAGCTCATTGAATGTGTCTGATGATTCTATTGCATCCGTTTCT
AATGCCAAATCTAAGAAGTTCCATCGTCGTACATCATCTAGAAATAGACGATTATCTTCA
GCATCGATGGTCTCAACCGACTATGAAGGTGGTCCATTTTCCGAAGAAGAAGACGAAGAT
TTTGAAAAAGAAGCCATTGCAACGGTTGACAGATCCATGGAGAACAATCACGATTTGGAT
ACCGCGTTATTGGAATTAAATACCTTGAGAATGTCCATGAACGTCACTTATCATGAAGTC
AGATTAGCCACTTCTAAAGCATTAATTCACAAGATTATCCATTTTATCACTACCGATACC
TTGGACGTTAAGGAAGCCACCGAAAAAATCTTCAACAAATGGGGCTTGTTATTCAAGAGA
CAAGTGTTCGAAGAGTTTGAACAGGTCGACTTATTGCAAATCATACAAGATGTATGTTCC
AATGTAGACAAATCATACAACGGAAGGATTCTATTTATGGCACTTAACATATTGTACAAT
CAAGATATAGTAGAAGAAGAAAATATCTATAAATGGTGGGATTCAGAATCGTCTACTGCC
AATGATGATTTAGTACAAGTTAGAACTTTAACAGGCAAATGGGTCGATTGGTTACGGGAA
GCTGAGGAAGAAAGTGAGGAAGAAAGTGATTAA

Coding sequence    

>DEHA2G14322g.cds
ATGGCTCCAAAGAATAAGAAGCAAAAGGAAATCGTTCAGGATGACCGTTTCCAAGCGATT
GTCTTAACTGATTCGTTTGAAACCAGATTCATGCCATTGACGTCTATTCTACCAAGATGC
TTATTACCTTTAGCGAACGTCCCATTAATTGAATATACATTGGAATTCTTAGCTAATGCT
GGGGTCAATGAAGTGTACTTAATGTGCTCTTCTCATGCTGACCAAATCCAAGAATACATT
GAAAAGTCCAAATGGTCATCGAAAAACTCACCTTTCAAGATAAGTACCATAATGTCTTTA
GAATCCAGGTCAGTGGGAGATGCTATGAGAGATTTAGATAATAGAGGGTTGATTTCTGGT
GATTTCTTGTTGGTTTCTGGTGATGTGGTGACTAATATCGATTTTGAAAAGGCCATGAAT
GCCCATAAGCAAAGAAAGCAGATGGATAAAGACCATATTGTAACAATGGTATTAACGCCT
GCTAGTCCATTGCATCGTACAAGATCACAAGTTGACCCTGCTACATTCATTTTGGATAAG
AATACTGGAAGATGTGTATTTTACCAAGGAATTCCACCGGTTGACGGTAAGAGAAGCAGC
ATAAATATTGATCCCGAATTATTAGAGGATATCGAAGACGAAATGGTAATTAGAAATGAT
TTAATTGATTGCTGTGTTGATATCTGTTCGCCACATGTTCCACAAATTTTTCAAGAGAAT
TTTGATTACCAATATTTGAGAAGTGATTTTGTTAAAGGTGTTTTGACATCTGATTTATTG
AAGAAAACTATTTATGCATATATAACTGATGGATCTGAATATGCAGCAAGAGTAGAAAGT
TGGGCAACCTATGATGCTGTTTCACAGGATGTCTTAGCTAGGTGGTGTTATCCGTTAGTT
CCTGATTCAAACTTGTTGGAAAGCAATTCTTATAGTTATGAATTCAATCATATTTATAAA
GAGGATAAGGTTATTTTGGCACAATCGTGCAAAATAGGCAGTTGTACATCCATTGGTACT
AATTCATCTGTGGGAGAAGGTACATCAATTAAGAAGTCCGTTATTGGAAGAAACTGTCAA
ATTGGTAATAATGTAACTATCAACAACTCTTACATTTGGGATAATGCTATAATTAAAGAT
GACTCAGTTGTTGATCACAGTATCATTGCTGGTAATGCTGAAATTGGTAGTGGCGCTACT
TTAAGTCCAGGAACAGTCATTGGTTATAATGTAGTTATTGGTGATGGCATTCATCTTTCA
AATAACACAAGGATCGTGGAAAAGCCAATTGATAGAGATGATGAATCTTTTGAACTGAGT
CGTTCATTTGATAGTGAGCAGGAAGACGGAAAGACTAATGGTGGTGAATATATCAATGCC
GATCAAAGTGTAAATGACATAGACGTGGTCGGCGACAATGGTGTTGGCTTCTTATATGTG
TCAGACAATGAATTGGATGAGGAATCTGATTCAGAATATGGCGTATCTCATAACTACTCT
GGTATAATTTATCAGATGAGCTCATTGAATGTGTCTGATGATTCTATTGCATCCGTTTCT
AATGCCAAATCTAAGAAGTTCCATCGTCGTACATCATCTAGAAATAGACGATTATCTTCA
GCATCGATGGTCTCAACCGACTATGAAGGTGGTCCATTTTCCGAAGAAGAAGACGAAGAT
TTTGAAAAAGAAGCCATTGCAACGGTTGACAGATCCATGGAGAACAATCACGATTTGGAT
ACCGCGTTATTGGAATTAAATACCTTGAGAATGTCCATGAACGTCACTTATCATGAAGTC
AGATTAGCCACTTCTAAAGCATTAATTCACAAGATTATCCATTTTATCACTACCGATACC
TTGGACGTTAAGGAAGCCACCGAAAAAATCTTCAACAAATGGGGCTTGTTATTCAAGAGA
CAAGTGTTCGAAGAGTTTGAACAGGTCGACTTATTGCAAATCATACAAGATGTATGTTCC
AATGTAGACAAATCATACAACGGAAGGATTCTATTTATGGCACTTAACATATTGTACAAT
CAAGATATAGTAGAAGAAGAAAATATCTATAAATGGTGGGATTCAGAATCGTCTACTGCC
AATGATGATTTAGTACAAGTTAGAACTTTAACAGGCAAATGGGTCGATTGGTTACGGGAA
GCTGAGGAAGAAAGTGAGGAAGAAAGTGATTAA

Predicted translation product    

>DEHA2G14322g.aa
MAPKNKKQKEIVQDDRFQAIVLTDSFETRFMPLTSILPRCLLPLANVPLIEYTLEFLANA
GVNEVYLMCSSHADQIQEYIEKSKWSSKNSPFKISTIMSLESRSVGDAMRDLDNRGLISG
DFLLVSGDVVTNIDFEKAMNAHKQRKQMDKDHIVTMVLTPASPLHRTRSQVDPATFILDK
NTGRCVFYQGIPPVDGKRSSINIDPELLEDIEDEMVIRNDLIDCCVDICSPHVPQIFQEN
FDYQYLRSDFVKGVLTSDLLKKTIYAYITDGSEYAARVESWATYDAVSQDVLARWCYPLV
PDSNLLESNSYSYEFNHIYKEDKVILAQSCKIGSCTSIGTNSSVGEGTSIKKSVIGRNCQ
IGNNVTINNSYIWDNAIIKDDSVVDHSIIAGNAEIGSGATLSPGTVIGYNVVIGDGIHLS
NNTRIVEKPIDRDDESFELSRSFDSEQEDGKTNGGEYINADQSVNDIDVVGDNGVGFLYV
SDNELDEESDSEYGVSHNYSGIIYQMSSLNVSDDSIASVSNAKSKKFHRRTSSRNRRLSS
ASMVSTDYEGGPFSEEEDEDFEKEAIATVDRSMENNHDLDTALLELNTLRMSMNVTYHEV
RLATSKALIHKIIHFITTDTLDVKEATEKIFNKWGLLFKRQVFEEFEQVDLLQIIQDVCS
NVDKSYNGRILFMALNILYNQDIVEEENIYKWWDSESSTANDDLVQVRTLTGKWVDWLRE
AEEESEEESD*



Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites