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Element type: CDS
Element length: 1422 nucleotides,
on sense strand of
Deha2F: 164192..165613.
Other names:
DEHA-CDS2039.1
DEHA-IPF8955
DEHA0F02156g
Coding sequence: 474 codons.
Element length: 1422 nucleotides,
on sense strand of
Deha2F: 164192..165613.
Other names:
DEHA-CDS2039.1
DEHA-IPF8955
DEHA0F02156g
Coding sequence: 474 codons.
Homologs and Orthologs
Homologs in protein families: GL3R4198 GL3R4198.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2F01892p 
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>DEHA2F01892g.nt TACTGACGGAGAAAGTAAATATGATCCCGCCTGGAAAAATGCATCTGTTGGGAATTTCTT CAAGATGTTGTTTAATACAAAATCGGCTTATGCTCATAGAACAACATATTTAGAACCATA TTATAATCCCCAGTTTGCTAAAATTCGTACCAGAAGACTTTTCTATTGGTTTCCTTTAGC TATGACTATTGCCGTGGTAGCAGTCTATATTCGTTGTATTTATAGAGTGGTTGAATTGGC TCAAGGTTTCAGTGGTTATCTTATTACACACGAGGTATATATCATGGTCTTGGACGCCCT TATGATTGCAATTACTGCTATAGTTTTTGTTCCTTTCCATCCAGTCCATGTATTCGGTGC AAAGAATAGAATTAGATTGGCTGCGATTAAAAAGAACTTGGATGAAGCCAGCGATAATCC GGCCGACATCGCCGATGATAATACTGCCTACGATAATACTGCCGGCGATAATACTGCCTA CGTGTCTGCTAAAGGTTCGATAAAAGAGGAGAACAGTGATTCATATTAGTTTTATATTTT TTGAATGTATATTAGTGTAATGCGTTAGAATAGAATTTTAAGAATGCTCGTAGATTTAGC GCTTCTATTTTTTTATTTTTGTGGTCTTCATTCCTTTTTGCATTAAAAGGCTGCAAAATT TTGGTGTACAAAAGAGTTCTGAGTACTTTATAAGAGTTACAAATTCCTCGTTGCAATTAA TATTTTATTGTCTAGCAATATTTAATTGAAGAAGGTTTTATTGCATTTGCCAAAAAAAAA GCTATCTAAATAATTCATTATGAGTGATGCCAAGTTCAATTCCACCTTAAACGTCGACTC CCTTCTCAACGAATTGCCTTATTTCCCAAATGACTATGATCCACTAAAAAATGAATCAAT TGAGGATCTATTATTGAATGGTCACATCAACAAAACTTATCCAGAAGATGGATTTATTGG ATTCCATTCTTTGAAGATTTGTAGTACAAATGCTAAGCAAATGGCCAAGTATTTGGAATT ATCCATGGGATTTGAAGAAGTTGCTTACCGTGGATTAGAAACCAACTCAAGAAGACTTGC ATCACATGTTGTTCGAAATGGCAATATTTTGTTTGAAATTATCAACACACTTGAATCTGT TGCAGAACACTACCCAACAGTCCCAATGTCCAAAGAGGAGGCTTTGAGTATAAAGTTAGA TTATTCTGCTGATGAAGCACACATTTTGAAATCATTGAAGGAAAAGATCATCAAACTTAC GGCTGAAATTGTTGATGAAAATCTTGATAGATACAAATACGCAATGGATATTAAAGCTGC GAAAGAGAATTTGGAACGATCAATTATTAACTCAACAAACTTCACGGCTGCAATTTCCAC CATTAGAAAATCAATTAATGAATGTGTCGAAACCTCCAAAAAAGCTATTCAGGACAATTT CGAATCATTCTTGATTCAGGAATTTGTTAAGATTCATGGCGAGGGAGTAATGGATATTTC TTTTAATGTCCTTGACGTTGATTCTGCGTTCCAAAAGGCTATAGAGTCAGGCGCTTACAT CATAAAGTTGCCCCAAACAATGTCTGATGTTCATGGTTCGGTAAAATTAGCTACAATTGC AGTTCCTTATACTGATATACATCATACATTGATTCAAAATAAAGACTATTCGGGTCCATT CCTCCCCAACTATACGAAATCAATTATTGAAAAGCCAGAAACCTATATGCACCAATTAGA GTCTTTACCTCCAATAAGATTGGATTGTATAGATCACTGTGTTGAAAACTATAGTTGGAA TCAAATGATGGAACACGCCAGGTTCTATGCCAATATTTTCGGATTCCATAAATATTGGTC TGTAGATGAAAAGGATGTTTTCACTGGCGAGACCGCTTTAAAATCAATCGTTATGGCTTC AAGTAATGGAAAAGTCAAAATGCCTATTAATGAACCTGCGAAAGGCCGCAAAAAGAGTCA AATTGAAGAATTTTATGACTTTAATGGTGGCCCAGGTGTGCAACATATAGCCCTCAAGAC AAATGATATAATTGCAACAGTTACTTCCTTGAGGAAAAGAGGCATTGAATTTAATCCTGC TTCCCAGAAGTATTATGATACTTTGAAGCAAAGATTGATAAACGATGATATCATCCTTAA GGAGGATTTTAATAGCATTCAAAATTTGAATATTCTTGTTGATTATGATCCCGAAACCCG TAATAATGCATCCAAAACTTGCAATTATATCTTACAGATCTTCACTAAACCGTTACATGA TCGCCCTACGTTATTCATTGAAATAATTCAAAGACGTCATCACAATGGCTTTGGTAAGGG TACTTTCAAGGGTCTTTTCGAAACTATCGAAGCTCAACAAAAGCTTCGTGGAACATTAGT TTCATCGGACAAAGCCGAATAAAAATTTGGAAAATAAATACAAGACAAAAGGGGCAAAAA CATCCTTGCTAATATTCATTTATATCTTTATAGTAATAAACTTTCTTTCTTAAACTAACT TGTTGGAAGAATTTTCAAAAGGAAAAATTCAATGGGATATACGTCCACCACATACATTAA TAAATTAAATATCATACATAAATCATATCCTCCTATCATTTACTAATAGAAGAAAAGATA CAGTACGTAAGAATAATTTTTTGAGGCTTGATAGTAATGTATGTGACATTTTTGATTCTA TTGTAAGCTAGTTCTGCCAGTA
>DEHA2F01892g.cds ATGGCCAAGTATTTGGAATTATCCATGGGATTTGAAGAAGTTGCTTACCGTGGATTAGAA ACCAACTCAAGAAGACTTGCATCACATGTTGTTCGAAATGGCAATATTTTGTTTGAAATT ATCAACACACTTGAATCTGTTGCAGAACACTACCCAACAGTCCCAATGTCCAAAGAGGAG GCTTTGAGTATAAAGTTAGATTATTCTGCTGATGAAGCACACATTTTGAAATCATTGAAG GAAAAGATCATCAAACTTACGGCTGAAATTGTTGATGAAAATCTTGATAGATACAAATAC GCAATGGATATTAAAGCTGCGAAAGAGAATTTGGAACGATCAATTATTAACTCAACAAAC TTCACGGCTGCAATTTCCACCATTAGAAAATCAATTAATGAATGTGTCGAAACCTCCAAA AAAGCTATTCAGGACAATTTCGAATCATTCTTGATTCAGGAATTTGTTAAGATTCATGGC GAGGGAGTAATGGATATTTCTTTTAATGTCCTTGACGTTGATTCTGCGTTCCAAAAGGCT ATAGAGTCAGGCGCTTACATCATAAAGTTGCCCCAAACAATGTCTGATGTTCATGGTTCG GTAAAATTAGCTACAATTGCAGTTCCTTATACTGATATACATCATACATTGATTCAAAAT AAAGACTATTCGGGTCCATTCCTCCCCAACTATACGAAATCAATTATTGAAAAGCCAGAA ACCTATATGCACCAATTAGAGTCTTTACCTCCAATAAGATTGGATTGTATAGATCACTGT GTTGAAAACTATAGTTGGAATCAAATGATGGAACACGCCAGGTTCTATGCCAATATTTTC GGATTCCATAAATATTGGTCTGTAGATGAAAAGGATGTTTTCACTGGCGAGACCGCTTTA AAATCAATCGTTATGGCTTCAAGTAATGGAAAAGTCAAAATGCCTATTAATGAACCTGCG AAAGGCCGCAAAAAGAGTCAAATTGAAGAATTTTATGACTTTAATGGTGGCCCAGGTGTG CAACATATAGCCCTCAAGACAAATGATATAATTGCAACAGTTACTTCCTTGAGGAAAAGA GGCATTGAATTTAATCCTGCTTCCCAGAAGTATTATGATACTTTGAAGCAAAGATTGATA AACGATGATATCATCCTTAAGGAGGATTTTAATAGCATTCAAAATTTGAATATTCTTGTT GATTATGATCCCGAAACCCGTAATAATGCATCCAAAACTTGCAATTATATCTTACAGATC TTCACTAAACCGTTACATGATCGCCCTACGTTATTCATTGAAATAATTCAAAGACGTCAT CACAATGGCTTTGGTAAGGGTACTTTCAAGGGTCTTTTCGAAACTATCGAAGCTCAACAA AAGCTTCGTGGAACATTAGTTTCATCGGACAAAGCCGAATAA
>DEHA2F01892g.aa MAKYLELSMGFEEVAYRGLETNSRRLASHVVRNGNILFEIINTLESVAEHYPTVPMSKEE ALSIKLDYSADEAHILKSLKEKIIKLTAEIVDENLDRYKYAMDIKAAKENLERSIINSTN FTAAISTIRKSINECVETSKKAIQDNFESFLIQEFVKIHGEGVMDISFNVLDVDSAFQKA IESGAYIIKLPQTMSDVHGSVKLATIAVPYTDIHHTLIQNKDYSGPFLPNYTKSIIEKPE TYMHQLESLPPIRLDCIDHCVENYSWNQMMEHARFYANIFGFHKYWSVDEKDVFTGETAL KSIVMASSNGKVKMPINEPAKGRKKSQIEEFYDFNGGPGVQHIALKTNDIIATVTSLRKR GIEFNPASQKYYDTLKQRLINDDIILKEDFNSIQNLNILVDYDPETRNNASKTCNYILQI FTKPLHDRPTLFIEIIQRRHHNGFGKGTFKGLFETIEAQQKLRGTLVSSDKAE*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA2F01892g