HomeDEHA2F01056g
highly similar to uniprot|P41940 Saccharomyces cerevisiae YDL055C PSA1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from GTP and mannose-1-phosphate in cell wall biosynthesis
Element type: CDS
Element length: 1089 nucleotides,
on anti-sense strand of
Deha2F: complement(95058..96146).
Other names:
DEHA-CDS3552.1
DEHA-IPF9023
DEHA0F01265g
Coding sequence: 363 codons.
Element length: 1089 nucleotides,
on anti-sense strand of
Deha2F: complement(95058..96146).
Other names:
DEHA-CDS3552.1
DEHA-IPF9023
DEHA0F01265g
Coding sequence: 363 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0213 GL3C0213.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2F01056p 
highly similar to uniprot|P41940 Saccharomyces cerevisiae YDL055C PSA1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase) synthesizes GDP- mannose from GTP and mannose-1-phosphate in cell wall biosynthesis
Protein domain map
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>DEHA2F01056g.nt AATCGTCTGGAAAGGAATATGGGCAAAACGCGGATATAGGGTTTTTTAGTATCTTGCATA ATGGTATAATAATACATAAAACATTCATAAAAATAAACTAGTCAATATCTTGTATTTATC TTGTATCTATCTACACTTACCTCGTCTAGTCTAATTGAATAGGTACATTCCGGGTTTATG GCCCATCTCGAAAATCAAAAAATCTTCCGCGTACAATCGATACTATTACCTGCCACAATA GTCTAGAAAATAGAGGTGGCCGCTCCGGCTGGCGGCCACCTCTATTTTCCTGGCATATAC ATAACCATACCTGGATATAGGCAATACAACAACCAAATCCATTGACTGGTTGACTGGTCC GTTTAGTCGATGCATTAATCATTTTGTAAATTTAACAAGAATTTAACAATAAGGTATAAA CTATTTGACGCACAGAACATACATAATTATTATTGTACTTTTTGCGTACGTTTTGTATAT ATCCTTCTCAGCGTACGATCTAGTGCTGGTGTAAAGGCTGGCCAATTTCGAACTTCTGCT TTTTGTGTTCGCACGGCAAGCTCGTTCTCCTGGCTCGCTAGCCAAATTAATGTACCTGAA GCCGCTACTAAAAATGACACGGTAGCCTTTTCTCACTACCCACCATCATTAATAAGGTAT ATCCATCACCACAGGAGCCTAATGAAGAACCAATGTGGCATACACCGAGCGTGTCACTAA CGACATCGTAGTCCCCGTGTAGACATGGTATGCAACCTTCAAGCATGTAGTGTTTGGACT ACACGTTTGTTTACAGCCACGTCCATTTTTATTTTGAATTTTGCAAGACACGCAATTAAC AGATTTTTTCTGTTTCGACAACACACCGTGTAGTACAGCTATAAATATACCAGCATTCCC CTTTTTCGTGATTTCAAAAAACTTAATCTTTGATTTTATTTATATATATAAACGATATAT AAATATTGATATTTTAGGTATATTATTACATTAAGCAAATATGAAGGGATTAATTTTAGT CGGTGGTTACGGTACCCGTTTGAGACCTTTGACTTTGACTTTACCAAAGCCATTGGTTGA ATTTGGTAACAGACCAATGATTTTGCATCAAATCGAAGCATTAGCTAAGGCCGGTGTTAC TGATATTGTCTTGGCTGTTAACTACAGACCAGAAGTTATGGTCTCTACCTTAAAGAAATA CGAAGCTGAATACGGTGTTACCATCACTTTCTCCGTTGAAGAAGAACCATTAGGTACTGC AGGTCCATTAAAGTTGGCTGAAAAGGTTTTAAAGAAGGATGACACTCCTATCTTTGTTTT GAACTCTGATGTCATCTGTGACTACCCATTCCAAGAATTAGCAGACTTCCACAAGACTAG CGGTGGTAAAGCTACTATTGTCGCAACAAAGGTTGACGAACCATCCAAGTATGGTGTTAT TGTCCATGATAGAGATACTCCAAACTTGATCGACCGTTTCGTCGAAAAGCCAGTTGAGTT TGTTGGTAACAGAATCAATGCTGGTTTATATATCTTGAACCCATCTGTCATTGATTTGAT TGAAATGAAGCCTACTTCTATTGAAAAGGAAACTTTCCCTATCTTAGTTGAAAACAAGGA ATTATACTCCTTTGACTTGGAAGGATACTGGATGGATGTTGGTCAACCAAAGGATTTCTT GAGCGGTACTGTTTTGTACTTAACTGCCTTATCTAAGAAGGAACCAAAGAAGTTATGTAA CGAAAAATTCATTCACGGTGGTAATGTGTTGGTTGATCCATCTGCAAAGATCCATCCATC TGCTTTAATCGGTCCTAACGTTGTCATTGGTCCAAATGTTGTTGTTGGTGAAGGTGCCAG AATCCAAAGATCTGTCTTGTTATCTAACTCTGAAGTTAAGGACCACGCCTGGGTTAAGTC TACCATTGTTGGTTGGAACTCCAGAATTGGTAAGTGGGCAAGAACTGATGGTATTACTGT TTTAGGTGATGATGTTGAAATTAAGAATGAAGTCTATGTTAACGGTGCAAAGGTCTTACC ACATAAATCTATTTCCTCTAACGTCGAACATGAAGCTATTATTATGTGAACAAACATTAT CTTTCCTCTAACATATATACAACAAAACGGGCACGTTATAATCACATCTATAATTTTTTC TTATTTTATTTGTTTCATATATAAAATTAAAATTCTTGAATTACATGCATGATATTGGAA TATCATGAAATGGTGCAATAATAAATAATAGTCATAATCAATTAAATATGTAGTTTTTCT TTAGACTTTCCATTATTTTGAATCTAAGTTTATTAGTTAACTAATTTATATCATATAATA CTTCTAATTATATTCTACGATAGGCCTATAAATGTATTGTCCATATTTT
Coding sequence
>DEHA2F01056g.cds ATGAAGGGATTAATTTTAGTCGGTGGTTACGGTACCCGTTTGAGACCTTTGACTTTGACT TTACCAAAGCCATTGGTTGAATTTGGTAACAGACCAATGATTTTGCATCAAATCGAAGCA TTAGCTAAGGCCGGTGTTACTGATATTGTCTTGGCTGTTAACTACAGACCAGAAGTTATG GTCTCTACCTTAAAGAAATACGAAGCTGAATACGGTGTTACCATCACTTTCTCCGTTGAA GAAGAACCATTAGGTACTGCAGGTCCATTAAAGTTGGCTGAAAAGGTTTTAAAGAAGGAT GACACTCCTATCTTTGTTTTGAACTCTGATGTCATCTGTGACTACCCATTCCAAGAATTA GCAGACTTCCACAAGACTAGCGGTGGTAAAGCTACTATTGTCGCAACAAAGGTTGACGAA CCATCCAAGTATGGTGTTATTGTCCATGATAGAGATACTCCAAACTTGATCGACCGTTTC GTCGAAAAGCCAGTTGAGTTTGTTGGTAACAGAATCAATGCTGGTTTATATATCTTGAAC CCATCTGTCATTGATTTGATTGAAATGAAGCCTACTTCTATTGAAAAGGAAACTTTCCCT ATCTTAGTTGAAAACAAGGAATTATACTCCTTTGACTTGGAAGGATACTGGATGGATGTT GGTCAACCAAAGGATTTCTTGAGCGGTACTGTTTTGTACTTAACTGCCTTATCTAAGAAG GAACCAAAGAAGTTATGTAACGAAAAATTCATTCACGGTGGTAATGTGTTGGTTGATCCA TCTGCAAAGATCCATCCATCTGCTTTAATCGGTCCTAACGTTGTCATTGGTCCAAATGTT GTTGTTGGTGAAGGTGCCAGAATCCAAAGATCTGTCTTGTTATCTAACTCTGAAGTTAAG GACCACGCCTGGGTTAAGTCTACCATTGTTGGTTGGAACTCCAGAATTGGTAAGTGGGCA AGAACTGATGGTATTACTGTTTTAGGTGATGATGTTGAAATTAAGAATGAAGTCTATGTT AACGGTGCAAAGGTCTTACCACATAAATCTATTTCCTCTAACGTCGAACATGAAGCTATT ATTATGTGA
Predicted translation product
>DEHA2F01056g.aa MKGLILVGGYGTRLRPLTLTLPKPLVEFGNRPMILHQIEALAKAGVTDIVLAVNYRPEVM VSTLKKYEAEYGVTITFSVEEEPLGTAGPLKLAEKVLKKDDTPIFVLNSDVICDYPFQEL ADFHKTSGGKATIVATKVDEPSKYGVIVHDRDTPNLIDRFVEKPVEFVGNRINAGLYILN PSVIDLIEMKPTSIEKETFPILVENKELYSFDLEGYWMDVGQPKDFLSGTVLYLTALSKK EPKKLCNEKFIHGGNVLVDPSAKIHPSALIGPNVVIGPNVVVGEGARIQRSVLLSNSEVK DHAWVKSTIVGWNSRIGKWARTDGITVLGDDVEIKNEVYVNGAKVLPHKSISSNVEHEAI IM*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA2F01056p