HomeDEHA2E15862g
weakly similar to uniprot|P41940 Saccharomyces cerevisiae YDL055C PSA1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from GTP and mannose-1-phosphate in cell wall biosynthesis
Element type: CDS
Element length: 1530 nucleotides,
on sense strand of
Deha2E: 1284731..1286260.
Other names:
DEHA-CDS2105.1
DEHA-IPF11606
DEHA0E16544g
Coding sequence: 510 codons.
Element length: 1530 nucleotides,
on sense strand of
Deha2E: 1284731..1286260.
Other names:
DEHA-CDS2105.1
DEHA-IPF11606
DEHA0E16544g
Coding sequence: 510 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0213 GL3C0213.N3Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2E15862p 
weakly similar to uniprot|P41940 Saccharomyces cerevisiae YDL055C PSA1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase) synthesizes GDP- mannose from GTP and mannose-1-phosphate in cell wall biosynthesis
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>DEHA2E15862g.nt AGAAATGCAATATGCATTACCATTTCATAAGACAAGTGAATTGCTTGGTGTGAATAGCCA AAGTTTTAAAGCTGTTGGCATTGATTGCGAAATGGGGTTTACTACTAGAGGCTTCGAATT ATTGAGAATTACAGCTGTCGATTTTTTCAGTGGCGAAGATATTATTGATATTTTAGTCCG ACCAAAGGGTGATGTTATTGACTTGAATACGAGGTGGTCTGGAATTGCAGAAATCAAAGA AGAAGCAATGAATTTTGAGGATCTGATCAAACTTCTAGGTGAAGTTATTGATTCTAATAC CATTCTAATTGGCCATGGACTTGAAAATGATGTGAATTCTATGAGACTTATACATGAAAG AATAATTGATACTGCCGTGTTATATCCAAAGCACAAGACATCTCCTAAGTTCAGATTCCC TCTTAAATACTTAACTTTCAAGTATTTAGGCAGAACTATTCAATCAGGAGAACACGACAG TAGCGAAGATTCCCTTGCGGCTATTGACGTAGTTAAATATTTTATAAATCAAGATCCATA GTTAGTGCTGTTCACAATATACCTGACACTGGCTGCAAAATATATATAATTTTTGCAGCA TCTCACATTAAATGAAGATAATTATTCAATGAAGAGTACTTTTGCCATGCATGTATTAAT ATCTGGAATAAAGTACACAACAAAAGGATTCAAGCAATTATCGCTTCCTTTTTTTGCATT TGCTAATATTACCGTTTAGTATATATATTTACTCAATAATTACCTATTGTAATCCAAACT TGTAATACTTGATACTTCATTTGTATAAGTTGATCCATTCTATTGAGCATGTAAAATCAA TTATAAAAGCCTGCTCTCAAGATAATGTTATCCTCCATATGTCATGAATAATCCCATTCT AATTGTATTTTTTCATTCATGAACTTTTCTATATTTCGTGGGAAAGAATAATATCAAAAA ATGTGAACAAGTTAGAGCATTTATTGGATATTATTTGGCAATGTTTAGTATACATCCTTC TATGTGGGACTTTTCTTCATCGATTTTTTTTGCAATCTGTGCGATGGTCATATGTAGTAT ACAACCCCCACATTGCTATGACGATAAAAATAGAATATACTTTTTAGATTTATCAAGAAC AAGTAACAAGTATCAGGAGATGTCTTTGAAGGTAGTTATATTGATTGGAGGTGAGACTAC CGGTACAAGGTTTAGACCTTTGTCTATGGATACACCCAAAGTTTTATTCCCAATCGCAGG TAAACCCTTGATAAGCCATATAGTTCAAAAAATAGCTGAATTAGGGGAAGGTGAGTTAAT TGAAGTTTTTCTCCTTGGATATTTCACTGATTTGAAACCGTTTGATGAATATATTGCAGA GGCTAAGAAAGAATATTCTAACGTGAATATAAAATATTTGACAGAACCGTATTCTATGGG GACTGGAGGTGGCCTTTATTACTTTAGGGATGAAATATTTGGTGATGGGACATGCGAGGA ATTATTGGTTATTCATGGAGATATTGTATGTAATTACCCCTTCAAAGAATTAATCCAATT CTATAAAAAAAGTAATGCAGACTCTGTGATTATGGGAATCAACCCTTTGCTTCTTATGAA TAATTATCAGAACAAGACTCAAATTCAGAACCACACTCCATTCAAGGTGTATGATAATAT CGATACTTTTAGTAAATATGGTACGATAATTGCCAATAAGTCGGATTCTAAGATTGTCCA TTATGTTGAAAAGCCTTCTTCCAAGTTCTCAGAATTTCAATTACAAACAGAGTACAACAC ATTAATTAATGGAGGGGTCTACGTTTTTGACAAGTCAATATTAGAGTTTCTTGCAAAGGC ACAAAGTCATAAGTCTTCAAAGTGTAAAGAATATGATAGGCATAATCTAGACAACGAGTC TATAAACTCCAACGTACTTTCCCTCGAATTGGACGTTTTGAAGTTCCTACCTGAAGCCAA GAACCGGTTCTTAACATATAAATCGGATAGTTTTTGGAATCAATTGAAAACCCCCATTTC CGCTTTATTTGCAAACATCTTTTTCTTGGAAGAATACAAGAAAAATCACGTTTGCAATCC TTTGGCAACTCCTTCAGATAAGGTAATATCACCAGTTAGGGCGTCAAATTTTGTAACAAC TTCAGAAAATTATATAATCGGGCCAAATGTTTCGCTTGGTAGGAATGTTAAGATTGGAAA TGGTGTCAGAATTAAAAATTGTATCATCTCAGATAATGTCACTATCGGTGATAACTCCTT TGTTGCAAATGCCATTATTTCTAAAGACGTCAAAATTGGAAGATGGTGTCGTATTGAAGG AACATTTACTAATGACACGACTAGCAAGGATATAAATCAGGTCAGGTCAGACGGCTACTA TAAGCTTATCAATAATATAGTTGTTTTATGTCAAAATACAGTTGTGCATAACCAGGTTTT TGTTTACAATTCAATCGTTTTGCCTCATAAGGAATTAAAAAATGATGTGAAATATGAAAT CATCATGTGAAGAATAAGAGACGACTATATGGGACAAGACAAAGTGAAATCTTCAGTGCA ATGGTGCTCAATGTTACATTTTAGCAGAGTATATGTCATTTACTTTGCTGAATATCGTCT TTCAAATTTATACGTTTGCAAAATCATACCTATTAGAGTATCTTCCCTTTTTTTCTATAA TATATTGATTTTAAATTATTAGTTATAATTGTAAATTGTAGAGTCATGTCAGAAAACCAC AATGAAATTGCAAATATAGTACTTGAAATTGTTGCTTGGTGTACAGATGCAAAAAAAAAG AATCAATTGC
>DEHA2E15862g.cds ATGTTTAGTATACATCCTTCTATGTGGGACTTTTCTTCATCGATTTTTTTTGCAATCTGT GCGATGGTCATATGTAGTATACAACCCCCACATTGCTATGACGATAAAAATAGAATATAC TTTTTAGATTTATCAAGAACAAGTAACAAGTATCAGGAGATGTCTTTGAAGGTAGTTATA TTGATTGGAGGTGAGACTACCGGTACAAGGTTTAGACCTTTGTCTATGGATACACCCAAA GTTTTATTCCCAATCGCAGGTAAACCCTTGATAAGCCATATAGTTCAAAAAATAGCTGAA TTAGGGGAAGGTGAGTTAATTGAAGTTTTTCTCCTTGGATATTTCACTGATTTGAAACCG TTTGATGAATATATTGCAGAGGCTAAGAAAGAATATTCTAACGTGAATATAAAATATTTG ACAGAACCGTATTCTATGGGGACTGGAGGTGGCCTTTATTACTTTAGGGATGAAATATTT GGTGATGGGACATGCGAGGAATTATTGGTTATTCATGGAGATATTGTATGTAATTACCCC TTCAAAGAATTAATCCAATTCTATAAAAAAAGTAATGCAGACTCTGTGATTATGGGAATC AACCCTTTGCTTCTTATGAATAATTATCAGAACAAGACTCAAATTCAGAACCACACTCCA TTCAAGGTGTATGATAATATCGATACTTTTAGTAAATATGGTACGATAATTGCCAATAAG TCGGATTCTAAGATTGTCCATTATGTTGAAAAGCCTTCTTCCAAGTTCTCAGAATTTCAA TTACAAACAGAGTACAACACATTAATTAATGGAGGGGTCTACGTTTTTGACAAGTCAATA TTAGAGTTTCTTGCAAAGGCACAAAGTCATAAGTCTTCAAAGTGTAAAGAATATGATAGG CATAATCTAGACAACGAGTCTATAAACTCCAACGTACTTTCCCTCGAATTGGACGTTTTG AAGTTCCTACCTGAAGCCAAGAACCGGTTCTTAACATATAAATCGGATAGTTTTTGGAAT CAATTGAAAACCCCCATTTCCGCTTTATTTGCAAACATCTTTTTCTTGGAAGAATACAAG AAAAATCACGTTTGCAATCCTTTGGCAACTCCTTCAGATAAGGTAATATCACCAGTTAGG GCGTCAAATTTTGTAACAACTTCAGAAAATTATATAATCGGGCCAAATGTTTCGCTTGGT AGGAATGTTAAGATTGGAAATGGTGTCAGAATTAAAAATTGTATCATCTCAGATAATGTC ACTATCGGTGATAACTCCTTTGTTGCAAATGCCATTATTTCTAAAGACGTCAAAATTGGA AGATGGTGTCGTATTGAAGGAACATTTACTAATGACACGACTAGCAAGGATATAAATCAG GTCAGGTCAGACGGCTACTATAAGCTTATCAATAATATAGTTGTTTTATGTCAAAATACA GTTGTGCATAACCAGGTTTTTGTTTACAATTCAATCGTTTTGCCTCATAAGGAATTAAAA AATGATGTGAAATATGAAATCATCATGTGA
>DEHA2E15862g.aa MFSIHPSMWDFSSSIFFAICAMVICSIQPPHCYDDKNRIYFLDLSRTSNKYQEMSLKVVI LIGGETTGTRFRPLSMDTPKVLFPIAGKPLISHIVQKIAELGEGELIEVFLLGYFTDLKP FDEYIAEAKKEYSNVNIKYLTEPYSMGTGGGLYYFRDEIFGDGTCEELLVIHGDIVCNYP FKELIQFYKKSNADSVIMGINPLLLMNNYQNKTQIQNHTPFKVYDNIDTFSKYGTIIANK SDSKIVHYVEKPSSKFSEFQLQTEYNTLINGGVYVFDKSILEFLAKAQSHKSSKCKEYDR HNLDNESINSNVLSLELDVLKFLPEAKNRFLTYKSDSFWNQLKTPISALFANIFFLEEYK KNHVCNPLATPSDKVISPVRASNFVTTSENYIIGPNVSLGRNVKIGNGVRIKNCIISDNV TIGDNSFVANAIISKDVKIGRWCRIEGTFTNDTTSKDINQVRSDGYYKLINNIVVLCQNT VVHNQVFVYNSIVLPHKELKNDVKYEIIM*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA2E15862p