HomeDEHA2D17248g
similar to uniprot|P13711 Saccharomyces cerevisiae YGL205W POX1 Fatty-acyl coenzyme A oxidase, involved in the fatty acid beta-oxidation pathway
Element type: CDS
Element length: 2121 nucleotides,
on anti-sense strand of
Deha2D: complement(1432612..1434732).
Other names:
DEHA-CDS1115.1
DEHA-IPF2783
DEHA0D18722g
Coding sequence: 707 codons.
Element length: 2121 nucleotides,
on anti-sense strand of
Deha2D: complement(1432612..1434732).
Other names:
DEHA-CDS1115.1
DEHA-IPF2783
DEHA0D18722g
Coding sequence: 707 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0456 GL3C0456.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2D17248p 
similar to uniprot|P13711 Saccharomyces cerevisiae YGL205W POX1 Fatty-acyl coenzyme A oxidase involved in the fatty acid beta-oxidation pathway
Protein domain map
Database cross references:
InterPro: IPR002655
InterPro: IPR006090
InterPro: IPR006091
InterPro: IPR012258
InterPro: IPR013764
InterPro: IPR013786
UniProtKB/Swiss-Prot: Q6BRD5
InterPro: IPR002655
InterPro: IPR006090
InterPro: IPR006091
InterPro: IPR012258
InterPro: IPR013764
InterPro: IPR013786
UniProtKB/Swiss-Prot: Q6BRD5
Gene Ontology terms
None available yet
Sequence data
>DEHA2D17248g.nt TCTCTTAACTCAAGTATCAAAAAGCCTACTGGTTAGAAGTCACGTGATGTTGCATTTTTT CACTTTTGCAACGTTGTATGGCCGTTCCTAATAGTAGTGGTCGTTTAATGGACGAGATAC AAGTAGCTTGAACTACTAACACATTGGTTGCTCGGCTTCTTTTTTGTGATAATTAGTCCT ATAGATAGTGCTATAAAACTGTGTTAGTCTGAGACATCTCCAGTGTACCCATTGCATCGA AAAGCGATACCAACACAAATAAGCTCTTCACATAACCCATTTTCTCGCTATACTTCTTCT TATCAAATTCGGAATTTTGTCTTTCCTAGTAACTAGTTCCATCCGCTTCCCATTTTCGAC ACCATGCATTCAAAACCTGTAGGAATATTCTCGCGTGTACTTCATACATATAAAAGGTCC ACTAGCAATAGTTCCCAGTGCTGTACATAATCACCCCAAAGTCTACACCCTAGGAAAGCC CGAGGTAATACCCCACAGAATTCCAACGGAATTAACATATGAAAGTTTATCCTGCACCTT ACCCTTTGCAACGGCCTATATGGGCGATACGGATGTTTCCACCAATTTCTATCGTACGAT AATTCTTGTTTTGCAAGGTATCATCCTCACTTTAAAGACATATGGAGCACTAGCTTGGTA CCAGCATCTGAACATGATACTATATGGCCTGACTTCAATGAGTGTCGAAAACCGGAGTGA AAAATGTGTCCAATTCTTTAGTACCGAGCACTTTAGCCTCGGTTCACCCTATAACAAATA ACCTCGGTAACATGTGCCGAAATAGTGCGACAGTATTATGGGCTATTACACCCTGAGTGA TTGCCTGGATAAATGGTTTGTGGAGATCATACGGCAAGGAATTATATAAAATAAACTAAA AGTTACTTCAAATTTTTAAAGGTATCTTTTTGTTCTCTAGGGTATATATTTTAATTGTAA ATTTTACTATTAATTATCAACTACTCATCTATAAAACAAAATGGTTAGTGCTACTAATAC AGTGAATTCAGGTGTACCACCAAACCCAGCAGCTCTGATCCAGGCTGAAAGAGCAGCATC CAAATTTGACCCCAAGGAAATGCACTATTTCTTAGAAGGGGGTGAGGAAAGAGCTGAAAA ATTCAAGCAAATGATGCAACAAATGGAAAGAGATCCTATATTATCTGCCAACTTTCAATA TTATGATTTGACCAAGGACCAACAACGTGAGTTGACGGCTTTAAGAATTGACCGTTTAAC CAGATACATAGAAAACGAAAGTTTCGATGACTTCAACAAGAGAATGTCGCTTATGGGAGT TTTCGACCCACAATTATCCACCAGACTTGGTATTAACTTGGGTTTATTTGTTTCCTGCCT CAAGGGTAACGGTACAGCCGAACAGGTGAAGTACTGGGCTATGGATAAGTCAGCTGTATA CATGAGAGGTATTTACGGTTGTTTCGGTATGACTGAATTAGCTCACGGTTCTAATGTTGC TGGTTTAGAAACCACTGCTACTTTCGACGATGAAAACGACGAATTCATCATCAACACCCC ACACATTGGTGCTACTAAATGGTGGATTGGTGGTGCAGCACACTCTGCTACGCACTGTTC TGTCTACGCCAGATTAATTGTTGGTGGTCAAGATTACGGTGTCAAGACTTTTGTTGTCCC ATTAAGAGACTCCAACCACGACACAATGCCAGGTGTCACCGTTGGTGATATTGGTGCCAA GATGGGTAGAGATGGAATTGATAACGGTTGGATTCAATTCTCCAATGTCAGAATCCCAAG ATACTTCATGTTACAGAAATTCTGTAAGGTTTCCAGCGAAGGTGATGTTCAATTACCTCC ATTAGAACAATTATCATATTCTGCTTTATTGGGTGGTAGAGTCATGATGGTTCTTGACTC CTTCAGAGTTTCTGCTAGGTTTTCCACCGTTGCTTTAAGATACGCTATTGGTAGAAGACA ATTCAAGGCTGGTTCTGCTTCAGACGACAAAAATGCTTTAGAATGTCAATTGCTTGATTA CCCATTACACCAACGTCGTTTGTTACCATACTTAGCTTTATCTTATATTATTTCAGCTAG TGCTGTTAAAATTGAAACCACCATTGAAAGTACTCTTGAGAATTTAGACAAGGCTGTTGA AGCCGATGACATGGGCGCTATCATGAAGTCTATTGACAGTATGAAATCGTTATTCGTTGA CTCTGGTTCCTTAAAGTCTACTTGTACCTGGTTGGCTGCTGAAGTTATCGATCAATGTAG ACAAGCATGTGGTGGTCATGGTTACTCTGCATACTCTGGTTTCGGTAAGGCCTACAATGA CTGGGTCGTTATGTGTACTTGGGAAGGTGATAACAATGTTTTAGCCATGTCTGTTGGTAA GCAAATTATCAAGCATATTCTCGGTGTTCTTGACGGTAAGAAGGTCAAGGGTTCTGCAGA TTTCTTGAACAACACCGAGCAATACTTGAATGAAGAACCAGTTTTGAGGTCTGTTGATGA CTTGAAGGATCTTAAGAAGGTTTTACTTGCTATTGAAGTTGCCATCATTAGAGTTGCTTA CCAAGCATCCCAAACCTTGAAGGAAAACAAGGGTGATTTCGACACAGTTGGTGCTGAAAT GGTCACTCTTTCTAAGTTGAACGCCCACCACTTCATGTTGAGCGAATTCTTAGACAGAAT GGATTCATTTGAATCTAAGCAATTAGTTCCATACTTGGAATCTGTCGCTAAATTATATTC TGCTACCATCGTCTTAGAAAAGTTTGCTGGTGATTTCTTAGCCCAAGGTGTTTTCCCACC AAAATTAAACGGTGAATTGAATTCTAAACACATCCCAGAATTATGTAAGGAAATTAGACC TAATGTTATCGCATTGACTGATTCTTTCCAACAATCTGACATGATGATTAATTCTGCTAT TGGTTCTTACGATGGTAACATCTACGAAAACTACTTCGGTGTTGTTAAGGCCAACAATCC ACCTTCTAAGACAAAGGCTCCATACTCTGGTGCCTTGGAAGCCATGTTGAACAGACCTTC CAAGGAAGAAAGAGAAAGATTCGAAAAGTCTACTGAAACTGCTAAGATCTTATCCAAATA ATCAGCTTCAAAATTTATTGCTGGAAGGAATAAGCCGTGCATTATGATCTCGCTATTACA TAGATTTTCTAATTAATGAAAATTGTTATTTATTGTTTAATTTCTTCATGTGCCTTTCTT GTAGACTTCATAGAAACAAATGACCTTTTGCCCCTGCCCAATGTTGACTGCCCAATGTTG ATTTCATGCTTTAATATATTTGAGCCACTTAAAACCTCGCTCAATATACCAAGAGCTTCA AACTTAATTAATAGCTTGTCATCTTGGCACGTCACTAATCATGGCTGCTCATATAGTTTC G
>DEHA2D17248g.cds ATGGTTAGTGCTACTAATACAGTGAATTCAGGTGTACCACCAAACCCAGCAGCTCTGATC CAGGCTGAAAGAGCAGCATCCAAATTTGACCCCAAGGAAATGCACTATTTCTTAGAAGGG GGTGAGGAAAGAGCTGAAAAATTCAAGCAAATGATGCAACAAATGGAAAGAGATCCTATA TTATCTGCCAACTTTCAATATTATGATTTGACCAAGGACCAACAACGTGAGTTGACGGCT TTAAGAATTGACCGTTTAACCAGATACATAGAAAACGAAAGTTTCGATGACTTCAACAAG AGAATGTCGCTTATGGGAGTTTTCGACCCACAATTATCCACCAGACTTGGTATTAACTTG GGTTTATTTGTTTCCTGCCTCAAGGGTAACGGTACAGCCGAACAGGTGAAGTACTGGGCT ATGGATAAGTCAGCTGTATACATGAGAGGTATTTACGGTTGTTTCGGTATGACTGAATTA GCTCACGGTTCTAATGTTGCTGGTTTAGAAACCACTGCTACTTTCGACGATGAAAACGAC GAATTCATCATCAACACCCCACACATTGGTGCTACTAAATGGTGGATTGGTGGTGCAGCA CACTCTGCTACGCACTGTTCTGTCTACGCCAGATTAATTGTTGGTGGTCAAGATTACGGT GTCAAGACTTTTGTTGTCCCATTAAGAGACTCCAACCACGACACAATGCCAGGTGTCACC GTTGGTGATATTGGTGCCAAGATGGGTAGAGATGGAATTGATAACGGTTGGATTCAATTC TCCAATGTCAGAATCCCAAGATACTTCATGTTACAGAAATTCTGTAAGGTTTCCAGCGAA GGTGATGTTCAATTACCTCCATTAGAACAATTATCATATTCTGCTTTATTGGGTGGTAGA GTCATGATGGTTCTTGACTCCTTCAGAGTTTCTGCTAGGTTTTCCACCGTTGCTTTAAGA TACGCTATTGGTAGAAGACAATTCAAGGCTGGTTCTGCTTCAGACGACAAAAATGCTTTA GAATGTCAATTGCTTGATTACCCATTACACCAACGTCGTTTGTTACCATACTTAGCTTTA TCTTATATTATTTCAGCTAGTGCTGTTAAAATTGAAACCACCATTGAAAGTACTCTTGAG AATTTAGACAAGGCTGTTGAAGCCGATGACATGGGCGCTATCATGAAGTCTATTGACAGT ATGAAATCGTTATTCGTTGACTCTGGTTCCTTAAAGTCTACTTGTACCTGGTTGGCTGCT GAAGTTATCGATCAATGTAGACAAGCATGTGGTGGTCATGGTTACTCTGCATACTCTGGT TTCGGTAAGGCCTACAATGACTGGGTCGTTATGTGTACTTGGGAAGGTGATAACAATGTT TTAGCCATGTCTGTTGGTAAGCAAATTATCAAGCATATTCTCGGTGTTCTTGACGGTAAG AAGGTCAAGGGTTCTGCAGATTTCTTGAACAACACCGAGCAATACTTGAATGAAGAACCA GTTTTGAGGTCTGTTGATGACTTGAAGGATCTTAAGAAGGTTTTACTTGCTATTGAAGTT GCCATCATTAGAGTTGCTTACCAAGCATCCCAAACCTTGAAGGAAAACAAGGGTGATTTC GACACAGTTGGTGCTGAAATGGTCACTCTTTCTAAGTTGAACGCCCACCACTTCATGTTG AGCGAATTCTTAGACAGAATGGATTCATTTGAATCTAAGCAATTAGTTCCATACTTGGAA TCTGTCGCTAAATTATATTCTGCTACCATCGTCTTAGAAAAGTTTGCTGGTGATTTCTTA GCCCAAGGTGTTTTCCCACCAAAATTAAACGGTGAATTGAATTCTAAACACATCCCAGAA TTATGTAAGGAAATTAGACCTAATGTTATCGCATTGACTGATTCTTTCCAACAATCTGAC ATGATGATTAATTCTGCTATTGGTTCTTACGATGGTAACATCTACGAAAACTACTTCGGT GTTGTTAAGGCCAACAATCCACCTTCTAAGACAAAGGCTCCATACTCTGGTGCCTTGGAA GCCATGTTGAACAGACCTTCCAAGGAAGAAAGAGAAAGATTCGAAAAGTCTACTGAAACT GCTAAGATCTTATCCAAATAA
>DEHA2D17248g.aa MVSATNTVNSGVPPNPAALIQAERAASKFDPKEMHYFLEGGEERAEKFKQMMQQMERDPI LSANFQYYDLTKDQQRELTALRIDRLTRYIENESFDDFNKRMSLMGVFDPQLSTRLGINL GLFVSCLKGNGTAEQVKYWAMDKSAVYMRGIYGCFGMTELAHGSNVAGLETTATFDDEND EFIINTPHIGATKWWIGGAAHSATHCSVYARLIVGGQDYGVKTFVVPLRDSNHDTMPGVT VGDIGAKMGRDGIDNGWIQFSNVRIPRYFMLQKFCKVSSEGDVQLPPLEQLSYSALLGGR VMMVLDSFRVSARFSTVALRYAIGRRQFKAGSASDDKNALECQLLDYPLHQRRLLPYLAL SYIISASAVKIETTIESTLENLDKAVEADDMGAIMKSIDSMKSLFVDSGSLKSTCTWLAA EVIDQCRQACGGHGYSAYSGFGKAYNDWVVMCTWEGDNNVLAMSVGKQIIKHILGVLDGK KVKGSADFLNNTEQYLNEEPVLRSVDDLKDLKKVLLAIEVAIIRVAYQASQTLKENKGDF DTVGAEMVTLSKLNAHHFMLSEFLDRMDSFESKQLVPYLESVAKLYSATIVLEKFAGDFL AQGVFPPKLNGELNSKHIPELCKEIRPNVIALTDSFQQSDMMINSAIGSYDGNIYENYFG VVKANNPPSKTKAPYSGALEAMLNRPSKEERERFEKSTETAKILSK*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA2D17248g