HomeDEHA2D17204g
similar to uniprot|P13711 Saccharomyces cerevisiae YGL205W POX1 Fatty-acyl coenzyme A oxidase, involved in the fatty acid beta-oxidation pathway
Element type: CDS
Element length: 2121 nucleotides,
on anti-sense strand of
Deha2D: complement(1428792..1430912).
Other names:
DEHA-CDS1116.1
DEHA-IPF2787
DEHA0D18667g
Coding sequence: 707 codons.
Element length: 2121 nucleotides,
on anti-sense strand of
Deha2D: complement(1428792..1430912).
Other names:
DEHA-CDS1116.1
DEHA-IPF2787
DEHA0D18667g
Coding sequence: 707 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0456 GL3C0456.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2D17204p 
similar to uniprot|P13711 Saccharomyces cerevisiae YGL205W POX1 Fatty-acyl coenzyme A oxidase involved in the fatty acid beta-oxidation pathway
Protein domain map
Database cross references:
InterPro: IPR002655
InterPro: IPR006091
InterPro: IPR012258
InterPro: IPR013764
InterPro: IPR013786
UniProtKB/TrEMBL: Q6BRD8
InterPro: IPR002655
InterPro: IPR006091
InterPro: IPR012258
InterPro: IPR013764
InterPro: IPR013786
UniProtKB/TrEMBL: Q6BRD8
Gene Ontology terms
None available yet
Sequence data
>DEHA2D17204g.nt AGCGTTCAAAAGTAGATCCTGTTCGAAAGCGTACTACATGAGCGATACGTGGTGCAATTT GGAAAGTCCGGTGATAGCATTCGGGGTAATTACCTGGTTGATTTTCTGTTTATCGTTGGT GTTACTTGTGGTATTCACAATTATTCCCTGTCTACGTACTCGAGGTATTCACGGCTTAAT CGCACCCACTAGTTTCAAAATTGGGGCCTTATATTTGCAAGAACGACCTACAGAACTCAC ACATGACGTGGAACTAGGTCCTGTACTTTCCACGATGGAAGGGACAAGTGAAAAGATCCT AACCCTATAATGTTACAGCATTCCAATTGACGTTTGCTCGACTTGTTACCCGTGTTTCGA AGTGCGGGTGATGCCAACCTACTCCACGTCTCCCCGGTTTGAAAACCTGAAACATTTGCT TCCGGCTATCTTTGTTCGCGCTACACTTATACCTATGGTAATGACTTCCCTCCACAAATT TACTAAACCAAAGGGTCTATTCTTCGGATATTCTATTCTTCGGATAGCTTATTTTGTTCT CGTGCTCTATTCTTAGAGATTTTAAAAGTCGATCCTTACTGGGAACTTCTACTCATCAAT AAGAACCCATTAATGCAATACAATATAAGGCTAGATGATTAATTCAGTGCATCACCTCTA GTAGTCCGAATATCTTTGAGTACATTCCTTCTGAAATTCCTATTAAAATTGAGTAATCTA CATTAAGCACCCCAATCCCCCATACCCTATACTCCCTTGCTATTACACGTATACCCTTCG ACAATAGAACAATTGTAGAATAGTTTATTATATAATAGGACAAATAATCATAAGATTCTG GATAAATCGGGTATTGAAGCTAACCTTATTGAACCGTTTAGCCAAACGGAGTTAAAATAG TACCCCACAAAACTAGAGGAGGGGATCATATATATAATTACACTAGTATTTATTTCAAAT GAATTGCACCTTATATACCTTCTTTATTAAATAACTAAACATGTTTTCATCAAATACCGT TAATAGCAGTGCACCACCTAATCCATCTAAATCAATTCAAGATGAGAGGCTGCAAAATCA ATTCGAACCTACATTAATGCATGAATTCTTGGAAGGGTCTCGCGAGAACTCCCAGCAAAT CTTGAGACTCTATCACCAAATGGAAAGAGATCCAATTTTGTGCTCTAGTTACAAGGATTA TGAATTGAATAGATTAGAGGAGAGAACCAAATCGGCGTTGAGAATCAATCTGTTGAGTCG TTATATTGAAGAGGATTCACCATCAGACTTTCATAGGAGATTGAATTTGCTTGCTGTATA TGATCCATCCACGGGTATCAGATTGAGCATCAATTTGGGATTATTTGTCAACTGTATCAA AGGAAATGGTACGGCGGAGCAGTATAAGTATTGGTGTGTTGATAAGGAGACCACGAAAAT AAAAAATGCATATGGTTGTTTTGGGATGACAGAATTGGGACATGGATCCAATGTCGCCGG GTGTGAAACCACTGCCACCTTTGACGAAGAAAACGACCAATTCATCATAGACACTCCCCA TATCGGCGCAACCAAGTGGTGGATTGGGGGAGCTTTACATGTAGCCACCCATTGTGTCGT GTATGCTAGATTGATTGTCAAAGGGAAGGATTATGGGGTAACAACGTTTGTGGTTCCATT GAGGGACTCCAACCATGATGTGATGCCGGGAATTACTATTGGTGATATTGGAGGGAAAAT GGGACGTGAAGGTGTTGATAATGCTTGGATTCAGTTCTCTAATGTAAGGATCCCAAGATT CTTTATGTTGCAAAGGTTCTGTAAAGTTTCCAGCAGTGGTAAAGTTGAGTTACCTCCGTT ACAGCAATTGGTATATATTTCATTATTAGGCGGTAGGGTTATGATGGCTGTGGATTCCTA CAGAATCAGTGCCCGTTTTATCACCATTGCCGTTAGATATGCTGTTGGTAGAAGACAGTT CAAGAAAAACGGTGGTGACGGTAATGGCGATGGCTTGGAATGCAAGTTGTTGGATTATCC ATTGCATCAGCGCCGTTTAATGCCGTATTTGGCCTTGACTTATGCCATGGCGGTTGGGAC TAAAAAATTGGAGAATGATCATGCTGCATGTCTCAAAGAATTTGATTATGCAGTAAATTC TAATGATAAAGTGGCTTTGAAGAAAGCTTTAGAAACGACCAAGTCATTATTTGTTGACTC AGCATCTTTGAAGTCTACATGTACCTGGTTAGCTGGAGAGTGTATTACTGAGTGTAGACA AGCCTGTGGTGGTCATGGGTATTCAGCATATTCTGGATTTGGTAAGACGTACGGGGACTG GACAATTCAATGTACGTATGAAGGTGACAATAGTGTTTTAGGTATGTCTGCGGGTAAAGC TATCATAGCTAACACAGCACAAGTAATCAAGAAAAACAAAAAGATTACTGGCTCAATTTC ATTCTTATCGAATGCAAAGAATTATATCAATGATGAATTGGTTTTAAAGTCCGAAGATGA TCTCCAGGACTTATCCTTGGTCTTTAAAGCTCTTGAGGTGTTAATATGTAGACTTGCGAA CCAATCTATTGACGTTTTAGAGTCGTCTGGAGACAATAACTGGGATCTCGTTAGCTACCA GAGAGTTGTACTCTCCAAATTGAGATGCCACCATTATTTATTGCAGAATTTTATGTCCAG AATTGATAGTGCTGATGAATCTACGAAACCAATGTTGAAAGATGTTGCAAAAACATATGC CTATACTAGTATATTGGAGAACTTCTCTGCTGAATTGTTGTCTTTGAATGTAACATCACC TAAATTCATAAACCGGTTGAAGTCTAGTGTGATCCCAACGTACCTTAAGAAATTAAGAAA TCAAGCAATCACATTAACAGATTCATTCCAACAGCCAGATATGGTTCTTAATTCTGCTAT CGGTAACTACAACGGGGATATCTATGAAGACTATTTCAAGGTCGTCAAGCAGGCAAACCC ACCAACCCAAACTAAAGCTCCCTATTCTGCAGCCATAGAATCCATGCTAAACAGACCCAG TAAGGAGGAAAGAGAAAGGTTCGAAAAGTCCGCCGAAACCGCAAAAATCTTGTCCAAGTG AATCTATGCGTCGGTGCCCTTACAAATGCTACTAGCGATGCTCAAATATGTAGGCTAATG GCTACTCTCTATATATGATTTTTATAAATACACACAGTTATCAAATAGACACTTGCACTG TCCTTTCGGCACACTTTTATCCGTCTGTAGTGTGTGATTCTGTATACAACCCGAACAACT AGATCAACCCCTATGTCTTCTCCATATAACCTAACATGCAGCTTTAATACCGCACCAGGC AATATGGTAATTCATATTATTATCTTCCGTAAGATCTCTCTCGGTGGCCAAGCTGGCTAA G
>DEHA2D17204g.cds ATGTTTTCATCAAATACCGTTAATAGCAGTGCACCACCTAATCCATCTAAATCAATTCAA GATGAGAGGCTGCAAAATCAATTCGAACCTACATTAATGCATGAATTCTTGGAAGGGTCT CGCGAGAACTCCCAGCAAATCTTGAGACTCTATCACCAAATGGAAAGAGATCCAATTTTG TGCTCTAGTTACAAGGATTATGAATTGAATAGATTAGAGGAGAGAACCAAATCGGCGTTG AGAATCAATCTGTTGAGTCGTTATATTGAAGAGGATTCACCATCAGACTTTCATAGGAGA TTGAATTTGCTTGCTGTATATGATCCATCCACGGGTATCAGATTGAGCATCAATTTGGGA TTATTTGTCAACTGTATCAAAGGAAATGGTACGGCGGAGCAGTATAAGTATTGGTGTGTT GATAAGGAGACCACGAAAATAAAAAATGCATATGGTTGTTTTGGGATGACAGAATTGGGA CATGGATCCAATGTCGCCGGGTGTGAAACCACTGCCACCTTTGACGAAGAAAACGACCAA TTCATCATAGACACTCCCCATATCGGCGCAACCAAGTGGTGGATTGGGGGAGCTTTACAT GTAGCCACCCATTGTGTCGTGTATGCTAGATTGATTGTCAAAGGGAAGGATTATGGGGTA ACAACGTTTGTGGTTCCATTGAGGGACTCCAACCATGATGTGATGCCGGGAATTACTATT GGTGATATTGGAGGGAAAATGGGACGTGAAGGTGTTGATAATGCTTGGATTCAGTTCTCT AATGTAAGGATCCCAAGATTCTTTATGTTGCAAAGGTTCTGTAAAGTTTCCAGCAGTGGT AAAGTTGAGTTACCTCCGTTACAGCAATTGGTATATATTTCATTATTAGGCGGTAGGGTT ATGATGGCTGTGGATTCCTACAGAATCAGTGCCCGTTTTATCACCATTGCCGTTAGATAT GCTGTTGGTAGAAGACAGTTCAAGAAAAACGGTGGTGACGGTAATGGCGATGGCTTGGAA TGCAAGTTGTTGGATTATCCATTGCATCAGCGCCGTTTAATGCCGTATTTGGCCTTGACT TATGCCATGGCGGTTGGGACTAAAAAATTGGAGAATGATCATGCTGCATGTCTCAAAGAA TTTGATTATGCAGTAAATTCTAATGATAAAGTGGCTTTGAAGAAAGCTTTAGAAACGACC AAGTCATTATTTGTTGACTCAGCATCTTTGAAGTCTACATGTACCTGGTTAGCTGGAGAG TGTATTACTGAGTGTAGACAAGCCTGTGGTGGTCATGGGTATTCAGCATATTCTGGATTT GGTAAGACGTACGGGGACTGGACAATTCAATGTACGTATGAAGGTGACAATAGTGTTTTA GGTATGTCTGCGGGTAAAGCTATCATAGCTAACACAGCACAAGTAATCAAGAAAAACAAA AAGATTACTGGCTCAATTTCATTCTTATCGAATGCAAAGAATTATATCAATGATGAATTG GTTTTAAAGTCCGAAGATGATCTCCAGGACTTATCCTTGGTCTTTAAAGCTCTTGAGGTG TTAATATGTAGACTTGCGAACCAATCTATTGACGTTTTAGAGTCGTCTGGAGACAATAAC TGGGATCTCGTTAGCTACCAGAGAGTTGTACTCTCCAAATTGAGATGCCACCATTATTTA TTGCAGAATTTTATGTCCAGAATTGATAGTGCTGATGAATCTACGAAACCAATGTTGAAA GATGTTGCAAAAACATATGCCTATACTAGTATATTGGAGAACTTCTCTGCTGAATTGTTG TCTTTGAATGTAACATCACCTAAATTCATAAACCGGTTGAAGTCTAGTGTGATCCCAACG TACCTTAAGAAATTAAGAAATCAAGCAATCACATTAACAGATTCATTCCAACAGCCAGAT ATGGTTCTTAATTCTGCTATCGGTAACTACAACGGGGATATCTATGAAGACTATTTCAAG GTCGTCAAGCAGGCAAACCCACCAACCCAAACTAAAGCTCCCTATTCTGCAGCCATAGAA TCCATGCTAAACAGACCCAGTAAGGAGGAAAGAGAAAGGTTCGAAAAGTCCGCCGAAACC GCAAAAATCTTGTCCAAGTGA
>DEHA2D17204g.aa MFSSNTVNSSAPPNPSKSIQDERLQNQFEPTLMHEFLEGSRENSQQILRLYHQMERDPIL CSSYKDYELNRLEERTKSALRINLLSRYIEEDSPSDFHRRLNLLAVYDPSTGIRLSINLG LFVNCIKGNGTAEQYKYWCVDKETTKIKNAYGCFGMTELGHGSNVAGCETTATFDEENDQ FIIDTPHIGATKWWIGGALHVATHCVVYARLIVKGKDYGVTTFVVPLRDSNHDVMPGITI GDIGGKMGREGVDNAWIQFSNVRIPRFFMLQRFCKVSSSGKVELPPLQQLVYISLLGGRV MMAVDSYRISARFITIAVRYAVGRRQFKKNGGDGNGDGLECKLLDYPLHQRRLMPYLALT YAMAVGTKKLENDHAACLKEFDYAVNSNDKVALKKALETTKSLFVDSASLKSTCTWLAGE CITECRQACGGHGYSAYSGFGKTYGDWTIQCTYEGDNSVLGMSAGKAIIANTAQVIKKNK KITGSISFLSNAKNYINDELVLKSEDDLQDLSLVFKALEVLICRLANQSIDVLESSGDNN WDLVSYQRVVLSKLRCHHYLLQNFMSRIDSADESTKPMLKDVAKTYAYTSILENFSAELL SLNVTSPKFINRLKSSVIPTYLKKLRNQAITLTDSFQQPDMVLNSAIGNYNGDIYEDYFK VVKQANPPTQTKAPYSAAIESMLNRPSKEERERFEKSAETAKILSK*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA2D17204g