HomeDEHA2D10516g
similar to uniprot|P16661 Saccharomyces cerevisiae YBR110W ALG1 Mannosyltransferase, involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER)
Element type: CDS
Element length: 1419 nucleotides,
on sense strand of
Deha2D: 865846..867264.
Other names:
IPF_1228
Coding sequence: 473 codons.
Element length: 1419 nucleotides,
on sense strand of
Deha2D: 865846..867264.
Other names:
IPF_1228
Coding sequence: 473 codons.
Homologs and Orthologs
Homologs in protein families: GL3R2097 GL3R2097.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2D10516p 
similar to uniprot|P16661 Saccharomyces cerevisiae YBR110W ALG1 beta-mannosyltransferase
Protein domain map
Gene Ontology terms
None available yet
Sequence data
>DEHA2D10516g.nt ACAATCTTTCTTCAATCTTGAAATAATTTCCATATGTAAGAAGATGTTTTCAGCTTGAGT GGTGATAACACCCTTTTCAGTTAAGGCATCCTTCAACAATCTGAAATATGGCTTTTGGAA CAACGATTCAGCTGGACCTTCTGGATCAGAAGAGTCAGTGATAATGACATCGAATTGGTT CTTGTACTCAGCTAAGAATTTGAAACCATCTCCAATATGAACCTTGGTTCTTGGGTTCTT GTAAGATTGAGACATTTCTGGCAAGTATTTCTTTGAAACTTCAATAACTGTTTCATCAAT GTCACATAACCAAGCTTCTTCAATGGATTCGTGCTTCAAGATTTCTCTCAAAACACCACC GTCCCCACCACCAATAACCAAAGCCTTCTTTGGGTTAGGGTGGGAGTTAAGAGCCAAGTG AGCGATCATTTCTTGATAAGAAAATTCATCCCTTTCAGTACATTGGATGCAGTCATCCAA TACTAAAACGTTACCGTAGTCAGTAGATTTGAAAACTAACACATCTTGGTACTTGGATTT CTCAACATGTAATACTTTTTCAACTTTCAACGACATAGCTTGTCCAGGCCACATTGTGTC TGAAATTTCGGCGAACCATCCATCTTTGATGGAAGGGTGAGTTAATTCTTGAGCCATTGT TACTTTGACTGCTCTTGTTGTAGAATAAGCGAATAATCAATATACTTGAGTAGAAAAATT TTATTGCTACCGCAATAGTTGAACAAGCGAAAATTGAATATTCATATATCATGAGATATT GAGTAAACATTTCTTAAAGGCTATCATTGAATTTTATTTCTAAATTAGGCACAATGGCCG AGCGGTTAAGGCGAAAGACTTGAAATCTTTTGGGATTTTCCCGCGCAGGTTCGAGTCCTG CTTGTGTCGTTATTTTTTTTCCTGATATCTACCCTTCAGCGAACAGTTAAGCTTCTCTAC TGAAGGTAATCATTTCTTTTTTTTTTGACTAACATTGGTTATGGAGGAGTTTCAATTCAT CAAATACAAAGGTTTTGACCATGTTTTCAAATACTCTGGACCATGGTTATGGTGGTTGGT AGGATTTTATCTTTGTCTTCCAATATTGGCTTACACCTTATTACCATATTTAACAATGAA TGGAACTATTTCAGGTAAAAGAAAAACTGTATCTATATTTGTGTTGGGTGACTTGGGTCA CTCTCCAAGGATGTGCTATCATGCAAAGTCGTTCTCCAAGCTCGATTACTATGTTAACTT GTGTGGATACTTAGAAGAACAGCCGCCATTTGACATTATAGATGACATCAATATTGATAT ATATCCTATTACTGTTACGAAAAACACGTCAAATTTACCGTTTATTTTGTTTGCAGCAAA GAAAATGGTAGTTCAATTCTTCCAGTTATTGAAGCTATTGCTGGATTTCCGTGGTACAGA CTACGTTTTGATTCAAAATCCACCGTCAATTCCAATTCTTCTAATTGTATTGGCATACAT AAAAGTATTTAGTAGGAAAACGAAATTAATTATTGATTGGCACAATTTGAATTACACTAT ATTGAATTTAAAGTTTCAGAATTTGAAGCATCCGTTGGTTAGAATTTTGAAGACGTATGA AAGGGTTTTAGGACAATTTGCTGACTATAATATTACCGTCACTAGACAAATGAAAGAATT CTTGATAAAAGAGTTCAATTTCAATAAGAAAAAGATAATCACTCTACATGATAGACCAGG AGAACAATTTAAGCCTTTAGAATCATTGGGTGTTACAAAGCAAGAAATCCTAGAATCTCA TGATATTTTTAGAGACATTCAAAATATTTCTAAGTACAAGATTTTGGTCAGTTCAACGTC CTTCACCCCGGATGAAGACTTTAATTTATTATTAAGTGCATTGAATCAATATGATAACTC TTTAGCCGAAAGAGGATTGCCTCCAATTTTAATTATAATTACCGGGAAGGGTCCTTTAAA GAGTCAATTCTTACAAAAAGTAAAACAATTGAACTTTCTGGATAATGTCATTATTAAAAA TGCTTGGCTTTCATCGGAAGATTACCCGTTGATTTTATCTGTGGCTGATTTAAGCATTTC TTTACATACATCTTCTAGTGGTATCGACTTGCCAATGAAAATTGTTGATTTTTTTGGCTG TGGCATTCCTGTTATAACATTACGTTTTCCTGCCATAGGAGAATTAGTCACGCATGGAAC AAACGGATTAATTACTAAATCAGACAAGGATTCAAGTGTAAATGAATCTCAGGAAATTTA TAGGTTATTGACCGAAGCATTCAAGAACGATGAATTATTAGATAAGATTAAGCAAGGGGC ATTAAAAGAAAGCAACCTCAGGTGGGAAGAAAATTGGAATAATAAAATGGGAAAGCGCTT TGAATACTCTACTGATTGAATGTTAGCATGCTACTCTATATACATTTATCTAGAATATAA CCTTTAATTTGTTCGATATAATCCTGATCATTTTCATCTTTCATCAATTTCGTATAACTT GAATTTTCATTTGTCCAAAATCGAAAGCCACAATCCTGATAAGCGTCAAGATATTTATGA TCAGGAATCAAATCCCATTCTTCACAGTCTTCTTCACCAAGGGCAATACTAGTAAGATAA GTCCAACACTTCGCAGTTTCGGTGTGGTTGTAACCCCCTCCACCCAATATCATGACGGAA GTAGTACCAACAGCATTCA
>DEHA2D10516g.cds ATGGAGGAGTTTCAATTCATCAAATACAAAGGTTTTGACCATGTTTTCAAATACTCTGGA CCATGGTTATGGTGGTTGGTAGGATTTTATCTTTGTCTTCCAATATTGGCTTACACCTTA TTACCATATTTAACAATGAATGGAACTATTTCAGGTAAAAGAAAAACTGTATCTATATTT GTGTTGGGTGACTTGGGTCACTCTCCAAGGATGTGCTATCATGCAAAGTCGTTCTCCAAG CTCGATTACTATGTTAACTTGTGTGGATACTTAGAAGAACAGCCGCCATTTGACATTATA GATGACATCAATATTGATATATATCCTATTACTGTTACGAAAAACACGTCAAATTTACCG TTTATTTTGTTTGCAGCAAAGAAAATGGTAGTTCAATTCTTCCAGTTATTGAAGCTATTG CTGGATTTCCGTGGTACAGACTACGTTTTGATTCAAAATCCACCGTCAATTCCAATTCTT CTAATTGTATTGGCATACATAAAAGTATTTAGTAGGAAAACGAAATTAATTATTGATTGG CACAATTTGAATTACACTATATTGAATTTAAAGTTTCAGAATTTGAAGCATCCGTTGGTT AGAATTTTGAAGACGTATGAAAGGGTTTTAGGACAATTTGCTGACTATAATATTACCGTC ACTAGACAAATGAAAGAATTCTTGATAAAAGAGTTCAATTTCAATAAGAAAAAGATAATC ACTCTACATGATAGACCAGGAGAACAATTTAAGCCTTTAGAATCATTGGGTGTTACAAAG CAAGAAATCCTAGAATCTCATGATATTTTTAGAGACATTCAAAATATTTCTAAGTACAAG ATTTTGGTCAGTTCAACGTCCTTCACCCCGGATGAAGACTTTAATTTATTATTAAGTGCA TTGAATCAATATGATAACTCTTTAGCCGAAAGAGGATTGCCTCCAATTTTAATTATAATT ACCGGGAAGGGTCCTTTAAAGAGTCAATTCTTACAAAAAGTAAAACAATTGAACTTTCTG GATAATGTCATTATTAAAAATGCTTGGCTTTCATCGGAAGATTACCCGTTGATTTTATCT GTGGCTGATTTAAGCATTTCTTTACATACATCTTCTAGTGGTATCGACTTGCCAATGAAA ATTGTTGATTTTTTTGGCTGTGGCATTCCTGTTATAACATTACGTTTTCCTGCCATAGGA GAATTAGTCACGCATGGAACAAACGGATTAATTACTAAATCAGACAAGGATTCAAGTGTA AATGAATCTCAGGAAATTTATAGGTTATTGACCGAAGCATTCAAGAACGATGAATTATTA GATAAGATTAAGCAAGGGGCATTAAAAGAAAGCAACCTCAGGTGGGAAGAAAATTGGAAT AATAAAATGGGAAAGCGCTTTGAATACTCTACTGATTGA
>DEHA2D10516g.aa MEEFQFIKYKGFDHVFKYSGPWLWWLVGFYLCLPILAYTLLPYLTMNGTISGKRKTVSIF VLGDLGHSPRMCYHAKSFSKLDYYVNLCGYLEEQPPFDIIDDINIDIYPITVTKNTSNLP FILFAAKKMVVQFFQLLKLLLDFRGTDYVLIQNPPSIPILLIVLAYIKVFSRKTKLIIDW HNLNYTILNLKFQNLKHPLVRILKTYERVLGQFADYNITVTRQMKEFLIKEFNFNKKKII TLHDRPGEQFKPLESLGVTKQEILESHDIFRDIQNISKYKILVSSTSFTPDEDFNLLLSA LNQYDNSLAERGLPPILIIITGKGPLKSQFLQKVKQLNFLDNVIIKNAWLSSEDYPLILS VADLSISLHTSSSGIDLPMKIVDFFGCGIPVITLRFPAIGELVTHGTNGLITKSDKDSSV NESQEIYRLLTEAFKNDELLDKIKQGALKESNLRWEENWNNKMGKRFEYSTD*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA2D10516g