DEHA2C08272g


similar to uniprot|P38147 Saccharomyces cerevisiae YBR274w CHK1 checkpoint kinase 1

Genomic environment map

Element type: CDS
Element length: 1626 nucleotides,
on sense strand of
Deha2C: 729791..731416.
Other names:
DEHA-CDS2030.1
DEHA-IPF1874
DEHA0C09130g
Coding sequence: 542 codons.
Database cross references:
EMBL: CR382135
GeneID: 2900121
GenomeReviews: CR382135_GR
HOGENOM: HBG333050

Computed results  

None available yet


Homologs and Orthologs

Homologs in protein family: GL3C3165
Orthologs: strict determination not possible; homologs must be refined manually

Protein DEHA2C08272p  


similar to uniprot|P38147 Saccharomyces cerevisiae YBR274w CHK1 checkpoint kinase 1; SubName: Full=DEHA2C08272p;

Protein domain map

Protein length: 541 amino acids
Protein family: GL3C3165
Database cross references:
InterPro: IPR000719
InterPro: IPR002290
InterPro: IPR008271
InterPro: IPR011009
InterPro: IPR015729
InterPro: IPR017441
InterPro: IPR017442
InterPro: IPR020636
KEGG: dha:DEHA2C08272g
PANTHER: PTHR24347
PROSITE: PS00107
PROSITE: PS00108
PROSITE: PS50011
Pfam: PF00069
RefSeq: XP_458038.2
SMART: SM00220
UniProtKB/TrEMBL: Q6BUT1
UniProtKB: Q6BUT1_DEBHA

Computed results for DEHA2C08272p  

None available yet

Gene Ontology terms  


Sequence data  


Nucleotide sequence    

>DEHA2C08272g.nt
ATGGACTACAGTCAACGTTTATCACAGTTAGACTCTCTTCCTGTGCTAAAGCATGTTTCG
GTTGGGCAAACAATAGGTCAAGGAACTTTTGCTGTTGTTAAGGTCGCCAGTATCAGGAAC
AATCCACTGAAGTTAGTAGCCATAAAATATATTCATAGAGCCATTTCCCATAGCAAGGGA
ATTGATGATAATAGGATAGGTCTAGAACTAAGCATTCACAAGGAATGTTCAGGACACCCG
AATATGATAAAGCTTCATATGTTTGGTACTGATAATACGTGGATCTACATGGTAATGGAG
CTAGCAGAAAGTGGAGACTTATTTGATAAGATTGAGCCGGATATTGGAATAGATGAGGAA
TTGGCTAACTTCTATTTCACTCAACTAATCAATGCAGTTGATTTTATGCACCAAAAAGGG
GTTGCACATAGAGATATCAAACCGGAGAACATTCTCCTTGATAAGGATGGGAATTTGAAG
TTGGCAGATTTCGGGTTGGCGACAATTTTCAAACGTAAGGGAAGCCAAAAGAGACTTTCA
TACGAGAAATGTGGCTCGCCTCCATATATGGCTCCTGAAATAATTGGTGATGATGGGTAT
GATGCAACGATGAGTGATATATGGGCTTGTGGAATTGTACTCTTTGTTTTATTATCCGGC
CAAATACCATGGCAAGAACCCAACTACAAACATGACGAAGAATATACCAAATATGTTGAC
TTTGATGGCAGGATACTCGATACTCCGTGGAACCAATTCAGTCAAACTGTTAGACCGTTG
TTGAGGTCGATAATTAAGCCTGATGTTGGCAGGAGATTTACAATGGATCAAATAAGGTTG
CATCCATGGGTGAATCAGGAGAATTCATTCATGGATTCCAACAAACTATGCAATGACTCT
GAGGGTTTAGCGGAAAGATTGCTTTCGAATTTACAGGTTGGCTTATCTGACGAAGATATC
AAAACGACTTTATCAGAGACATCACAAGAGCAGGAGAGGAATCTTTTGAATAATAAGAAA
TTTATTTCTAACTCACAACCCACAAACGATATTGCCGTGATGATAGACGATGAATTCGAC
ATTCCTGTTATTCCAGCGACGCAGGATCCCGTCACTCATAAAGACAGTCCGTTTATTAAT
GATATTACCGATGCTCACGAAGAAATGCTTGCAATAGTTTCTAAAGATCCTACCATTTTG
CAATTTAAGAACACTCCACAATACAGAATGTCACAATTATCGACTACACAAAAGAATTTG
CTTGCATTCAAAAACATGCCTTTCAAGACGGCTGAAAGAATGACGAGATTCTTTTCAATT
TTACCAATCGAATCATTGGTTCCTATAATACGGGATTCCTTGCATAGAATAGGGGTTTCA
ACAACAAGTATTGATAATTATTCAATGGAAGAGTTGACTGAGCAGAACCATATTTATATC
AATGTCAATATTATAGCTGAAAAGTCTAAAATGCCTTTGAGAGGCTATATCAAGATTCTG
AAGTGTGATATTCGATTGCCATTGAGAAAAGTGGAATTCATAAAGTCAAAAGGTGATCCC
TTAGAATGGCGACACTTTTTTAAGAAAGTAACTATACTTTCCAGAGACGCGGTTTATATA
GACTAG

Coding sequence    

>DEHA2C08272g.cds
ATGGACTACAGTCAACGTTTATCACAGTTAGACTCTCTTCCTGTGCTAAAGCATGTTTCG
GTTGGGCAAACAATAGGTCAAGGAACTTTTGCTGTTGTTAAGGTCGCCAGTATCAGGAAC
AATCCACTGAAGTTAGTAGCCATAAAATATATTCATAGAGCCATTTCCCATAGCAAGGGA
ATTGATGATAATAGGATAGGTCTAGAACTAAGCATTCACAAGGAATGTTCAGGACACCCG
AATATGATAAAGCTTCATATGTTTGGTACTGATAATACGTGGATCTACATGGTAATGGAG
CTAGCAGAAAGTGGAGACTTATTTGATAAGATTGAGCCGGATATTGGAATAGATGAGGAA
TTGGCTAACTTCTATTTCACTCAACTAATCAATGCAGTTGATTTTATGCACCAAAAAGGG
GTTGCACATAGAGATATCAAACCGGAGAACATTCTCCTTGATAAGGATGGGAATTTGAAG
TTGGCAGATTTCGGGTTGGCGACAATTTTCAAACGTAAGGGAAGCCAAAAGAGACTTTCA
TACGAGAAATGTGGCTCGCCTCCATATATGGCTCCTGAAATAATTGGTGATGATGGGTAT
GATGCAACGATGAGTGATATATGGGCTTGTGGAATTGTACTCTTTGTTTTATTATCCGGC
CAAATACCATGGCAAGAACCCAACTACAAACATGACGAAGAATATACCAAATATGTTGAC
TTTGATGGCAGGATACTCGATACTCCGTGGAACCAATTCAGTCAAACTGTTAGACCGTTG
TTGAGGTCGATAATTAAGCCTGATGTTGGCAGGAGATTTACAATGGATCAAATAAGGTTG
CATCCATGGGTGAATCAGGAGAATTCATTCATGGATTCCAACAAACTATGCAATGACTCT
GAGGGTTTAGCGGAAAGATTGCTTTCGAATTTACAGGTTGGCTTATCTGACGAAGATATC
AAAACGACTTTATCAGAGACATCACAAGAGCAGGAGAGGAATCTTTTGAATAATAAGAAA
TTTATTTCTAACTCACAACCCACAAACGATATTGCCGTGATGATAGACGATGAATTCGAC
ATTCCTGTTATTCCAGCGACGCAGGATCCCGTCACTCATAAAGACAGTCCGTTTATTAAT
GATATTACCGATGCTCACGAAGAAATGCTTGCAATAGTTTCTAAAGATCCTACCATTTTG
CAATTTAAGAACACTCCACAATACAGAATGTCACAATTATCGACTACACAAAAGAATTTG
CTTGCATTCAAAAACATGCCTTTCAAGACGGCTGAAAGAATGACGAGATTCTTTTCAATT
TTACCAATCGAATCATTGGTTCCTATAATACGGGATTCCTTGCATAGAATAGGGGTTTCA
ACAACAAGTATTGATAATTATTCAATGGAAGAGTTGACTGAGCAGAACCATATTTATATC
AATGTCAATATTATAGCTGAAAAGTCTAAAATGCCTTTGAGAGGCTATATCAAGATTCTG
AAGTGTGATATTCGATTGCCATTGAGAAAAGTGGAATTCATAAAGTCAAAAGGTGATCCC
TTAGAATGGCGACACTTTTTTAAGAAAGTAACTATACTTTCCAGAGACGCGGTTTATATA
GACTAG

Predicted translation product    

>DEHA2C08272g.aa
MDYSQRLSQLDSLPVLKHVSVGQTIGQGTFAVVKVASIRNNPLKLVAIKYIHRAISHSKG
IDDNRIGLELSIHKECSGHPNMIKLHMFGTDNTWIYMVMELAESGDLFDKIEPDIGIDEE
LANFYFTQLINAVDFMHQKGVAHRDIKPENILLDKDGNLKLADFGLATIFKRKGSQKRLS
YEKCGSPPYMAPEIIGDDGYDATMSDIWACGIVLFVLLSGQIPWQEPNYKHDEEYTKYVD
FDGRILDTPWNQFSQTVRPLLRSIIKPDVGRRFTMDQIRLHPWVNQENSFMDSNKLCNDS
EGLAERLLSNLQVGLSDEDIKTTLSETSQEQERNLLNNKKFISNSQPTNDIAVMIDDEFD
IPVIPATQDPVTHKDSPFINDITDAHEEMLAIVSKDPTILQFKNTPQYRMSQLSTTQKNL
LAFKNMPFKTAERMTRFFSILPIESLVPIIRDSLHRIGVSTTSIDNYSMEELTEQNHIYI
NVNIIAEKSKMPLRGYIKILKCDIRLPLRKVEFIKSKGDPLEWRHFFKKVTILSRDAVYI
D*



Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites