HomeDEHA2C01078g
similar to uniprot|P05335 Candida maltosa Acyl- coenzyme A oxidase POX4 EC 1.3.3.6 Acyl-CoA oxidase
Element type: CDS
Element length: 2115 nucleotides,
on anti-sense strand of
Deha2C: complement(108533..110647).
Other names:
DEHA-CDS1125.1
DEHA-IPF2498
DEHA0C01155g
Coding sequence: 705 codons.
Element length: 2115 nucleotides,
on anti-sense strand of
Deha2C: complement(108533..110647).
Other names:
DEHA-CDS1125.1
DEHA-IPF2498
DEHA0C01155g
Coding sequence: 705 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0456 GL3C0456.N4Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2C01078p 
Protein domain map
Database cross references:
InterPro: IPR002655
InterPro: IPR006090
InterPro: IPR006091
InterPro: IPR012258
InterPro: IPR013764
InterPro: IPR013786
UniProtKB/TrEMBL: Q6BVP3
InterPro: IPR002655
InterPro: IPR006090
InterPro: IPR006091
InterPro: IPR012258
InterPro: IPR013764
InterPro: IPR013786
UniProtKB/TrEMBL: Q6BVP3
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>DEHA2C01078g.nt TCCTATATTTGTTCCCAAGGGACAATTCGTTCTCTACACTACGTATAGTATGCACAGACT GGAAGCCTACTACGGCAAAGATGCGGATGTCTATAGACCGGAAAGATGGGAAAACCTTAG AAATATAGGTTGGGCCTACATGCCTTTTAGCAGTGGACCAAGAGTTTGTCTCGGCCAACA GTTTGCCTTGACCGAAGCATCCTATATAACGATCAGGCTCGCGCAGATGTTTCCAAATCT CGAATCCCACGATTCAAAGTATCCGCCTCCCAAATTGACTAACTCAACAATGAGACATTT AGATGGCGTGTTTATAAGTTTGCATTAATGATTATGATATTTCAGTATATTGTAGTTTAG TTTAATAGTCCTCAATCTTACATCCTGTTTTCTACATGCATGCGCTCCTTTCGGGCCGTA TGCGTCTTGTGACTATTTTAATTTTTAATTGACACCGGTGACCATAATTATTGTCATGTT CACATTATCTATAGCTATATCATTATCCTCGAATACTACATATAAAATCTTATCATTTAT GACCCCTAACCACCATCTTGCAATACTTATACGGCGTGGTAGAATAACCAGATTTTGGCC GAGGTTAGGTTCTATCAATCAACTATATACAGGAAAGAACATATGCAATTTTCGCTGGCT CTAATACATCCCTCGGACCTTACTTTATTGCAAGGAAGAGGGTTCTCTCAGTGAAGACTA GCAACCACAAGCTGGCTTCAAACGTAAAGATAAGCACCGCAATCCGTCAATAAGTCAAAT ATGTGTACGTAAATTGACGTTAAAGTATATAAGTCTATTTACTGTCGATTTTAATAAGCA ATATGCTGCAGTTGACGCTTAGATAGCGACTTAAGTGCGAAAAATGCATGAGACGAACGT TGAAGCTCGGATCCCCTCTTCATATGGAAATTATATAAAGACTGGGGAAGTCCTTCGAGG AATAATAAATTTGTTTGTATTAAGGTAGCTAAAGTAAAATATGTCAAGTGTTACGAAGAA CGTTGAATTTTCCGAAGCACCCAATCCTGCTACATTGATTGGGGCTGAACGTGAAGCTGC TGTTTTTAACCCAGAAACTATGAACTATTTCTTGGAAGGATCCAAGGAAAAGTCAGAAGA AGTGAAGAAATTTATCCAGCAAATGGAAAGAGATCCAATCTTAGCAGCTAGCCCTAAGGT CTATGATTTAACCAAAGAAGAGCAAAGAGAGTTGACTGCACAGAAAATCAACAGAGTGTC GAGATACATTGAAGTAGAATCTTTTGACGAGTTGGAAAGAAGACTTTCTTTGATTAGTGT TTTTGACCCACAGCTCCACACTAGAATAGGGGTTCATTTAGGGTTATTTTTGAGTTGTGT CAGAGGTAATGGTTCGTTTGAGCAATTGAACTACTGGGCATTGACCAAAGAAGCAGCGTA TGTAAAGAATATCTACGGGTGTTTTGCTATGACCGAAATAGCGCACGGTTCCAATGTTGC CGGCTTGGAAACTACAGCTACATTTAACGAAGAAAATGACGAGTTTGTTATTAATACTCC ACACATTGGTGCTACCAAATGGTGGATTGGTGGTGCTGCCCATTCAGCAACCCATGCTGC TGTTTACGCCAGATTGATTGTCCACGGAAAAGACTACGGTGTCAAGACATTTGTTGTACC TTTGAGAGACTCAAACCACGACTTAATGCCAGGTGTCAGTGTGGGTGATATTGGTGCAAA GATGGGCAGAGATGGTATTGATAATGGTTGGATCCAGTTCTCTGGTGTCAGAATCCCTAG ATTTTTCATGTTACAAAAATTCACCAAAGTCACCGCCGAAGGTAAGGTTACTTTACCACC TAACAACCAATTATCTTATTCTGCTTTGCTTGGTGGTAGAGTTGTTATGGTTAAGGATGC CTTCAGATGGTCGTCCAGAGTAATTACTATTGCATTGAGATACGCCGTCGGCAGAAGACA ATTCAAGGCATCTAAGGCTGGTGAAAACGATAAGGAAAACCAATTGTTGGATTACCCATT ACATCAACGTCGTTTGATACCTTTGTTGGCTATGACATATGCTTTCTCTAACGGTTCTAA TGTGTTACAGGAGCTTTCTCACAAAACAATGGATGAATTAGACGACGCAGTGGCCGAAGA CGACAAAGCCGGTATTGACAAAGGTATCGAGGCAATGAAGTCATTATTCGTGGCTTCTGG TTCCTTGAAGTCTACTTGTACGTGGTTGACCTTGAGCACTATTGATCAATGTAGACAAGC ATGTGGTGGTCATGGTTACTCAGCTTATTCAGGGTTCGGTAAAATATACAATGATTGGGC TGTACAATGTACTTGGGAAGGTGATAATAACATTTTAGGAATGTCGATTGGTAAACAATT GGTTAAGAGTATTAGTAGTGTACTTCGTGACGGCCAAAACGTAACTGGTATTCTCGAATT CTTGACTGATTCCAAGAAATATCTTAATAGGGATGTCATTCTTCAAAATGAAGACATGAA TGACACTAGAAAGGTTTTACATGCAGTCGAGGTCGCAATTATTAGAGCCTCGAATCAAGC ATTGACAACCTTGGATGCCCACGGTGAAGACTGGGACTTTATTGGTGCAAACTTGGTGCA ATTGTCAAAGTTATTGGCACATTTCTTTTTGTTGAAAGCCTTCCTTGATAAGGTTGACTC TATAGAAGAAAAAGAATTAGTACCTGTGTTAGACAAGCTTGCTCAATTATACTCTGCCAC TATAATTTTAGAAGAGTTCTCTGGTATCTTCTTGACATATTCTGTGGTTTCTACTGAATC AATTTCTATTTTGACTGATCAACATATTCCAAAATTATGTAAGGATTTAAGACCACATGT TATTCCATTAACTGATTCTTTCCAATTATCTGATATGATGATCAATTCATCCTTAGGTAG TTATAATGGAGACATATATGAAAACTACTTTAAGATTGTTAAGGAGGCCAATCCACCTTT CAATCATAAAGCTCCATATTCTACTGACCTCGAAGCGATGTTGAACAGACCTTCTCAGGA AGATAGACAAAGACATGAATATTCTGATGAAGCTGAAGAAATTTTATCTAAATAATGAAA TATGCTTTATATAACTAAGAAATTATTTATTTGTATTATGTTTTGATTTAAAAAGATGTA GATTCATCGAATAACCGAGCATAGAACGAGTTCTGGCTATGAATTAGTTTTGTATTTGTT ATAAAATTTTACGATTAATCTTTTAGAATCAAGATATCAATTGTAGTAAATTATAAATCG AGGACGATAGAACGAACATTTACTGAGCATAAGACCTAATTTCTGGTTCATCACGAGTCT TATCGTCGTAACTTAAAATTAAGACAAGAGCTTCAGGAATTAATGCTTCGGTTGC
Coding sequence
>DEHA2C01078g.cds ATGTCAAGTGTTACGAAGAACGTTGAATTTTCCGAAGCACCCAATCCTGCTACATTGATT GGGGCTGAACGTGAAGCTGCTGTTTTTAACCCAGAAACTATGAACTATTTCTTGGAAGGA TCCAAGGAAAAGTCAGAAGAAGTGAAGAAATTTATCCAGCAAATGGAAAGAGATCCAATC TTAGCAGCTAGCCCTAAGGTCTATGATTTAACCAAAGAAGAGCAAAGAGAGTTGACTGCA CAGAAAATCAACAGAGTGTCGAGATACATTGAAGTAGAATCTTTTGACGAGTTGGAAAGA AGACTTTCTTTGATTAGTGTTTTTGACCCACAGCTCCACACTAGAATAGGGGTTCATTTA GGGTTATTTTTGAGTTGTGTCAGAGGTAATGGTTCGTTTGAGCAATTGAACTACTGGGCA TTGACCAAAGAAGCAGCGTATGTAAAGAATATCTACGGGTGTTTTGCTATGACCGAAATA GCGCACGGTTCCAATGTTGCCGGCTTGGAAACTACAGCTACATTTAACGAAGAAAATGAC GAGTTTGTTATTAATACTCCACACATTGGTGCTACCAAATGGTGGATTGGTGGTGCTGCC CATTCAGCAACCCATGCTGCTGTTTACGCCAGATTGATTGTCCACGGAAAAGACTACGGT GTCAAGACATTTGTTGTACCTTTGAGAGACTCAAACCACGACTTAATGCCAGGTGTCAGT GTGGGTGATATTGGTGCAAAGATGGGCAGAGATGGTATTGATAATGGTTGGATCCAGTTC TCTGGTGTCAGAATCCCTAGATTTTTCATGTTACAAAAATTCACCAAAGTCACCGCCGAA GGTAAGGTTACTTTACCACCTAACAACCAATTATCTTATTCTGCTTTGCTTGGTGGTAGA GTTGTTATGGTTAAGGATGCCTTCAGATGGTCGTCCAGAGTAATTACTATTGCATTGAGA TACGCCGTCGGCAGAAGACAATTCAAGGCATCTAAGGCTGGTGAAAACGATAAGGAAAAC CAATTGTTGGATTACCCATTACATCAACGTCGTTTGATACCTTTGTTGGCTATGACATAT GCTTTCTCTAACGGTTCTAATGTGTTACAGGAGCTTTCTCACAAAACAATGGATGAATTA GACGACGCAGTGGCCGAAGACGACAAAGCCGGTATTGACAAAGGTATCGAGGCAATGAAG TCATTATTCGTGGCTTCTGGTTCCTTGAAGTCTACTTGTACGTGGTTGACCTTGAGCACT ATTGATCAATGTAGACAAGCATGTGGTGGTCATGGTTACTCAGCTTATTCAGGGTTCGGT AAAATATACAATGATTGGGCTGTACAATGTACTTGGGAAGGTGATAATAACATTTTAGGA ATGTCGATTGGTAAACAATTGGTTAAGAGTATTAGTAGTGTACTTCGTGACGGCCAAAAC GTAACTGGTATTCTCGAATTCTTGACTGATTCCAAGAAATATCTTAATAGGGATGTCATT CTTCAAAATGAAGACATGAATGACACTAGAAAGGTTTTACATGCAGTCGAGGTCGCAATT ATTAGAGCCTCGAATCAAGCATTGACAACCTTGGATGCCCACGGTGAAGACTGGGACTTT ATTGGTGCAAACTTGGTGCAATTGTCAAAGTTATTGGCACATTTCTTTTTGTTGAAAGCC TTCCTTGATAAGGTTGACTCTATAGAAGAAAAAGAATTAGTACCTGTGTTAGACAAGCTT GCTCAATTATACTCTGCCACTATAATTTTAGAAGAGTTCTCTGGTATCTTCTTGACATAT TCTGTGGTTTCTACTGAATCAATTTCTATTTTGACTGATCAACATATTCCAAAATTATGT AAGGATTTAAGACCACATGTTATTCCATTAACTGATTCTTTCCAATTATCTGATATGATG ATCAATTCATCCTTAGGTAGTTATAATGGAGACATATATGAAAACTACTTTAAGATTGTT AAGGAGGCCAATCCACCTTTCAATCATAAAGCTCCATATTCTACTGACCTCGAAGCGATG TTGAACAGACCTTCTCAGGAAGATAGACAAAGACATGAATATTCTGATGAAGCTGAAGAA ATTTTATCTAAATAA
Predicted translation product
>DEHA2C01078g.aa MSSVTKNVEFSEAPNPATLIGAEREAAVFNPETMNYFLEGSKEKSEEVKKFIQQMERDPI LAASPKVYDLTKEEQRELTAQKINRVSRYIEVESFDELERRLSLISVFDPQLHTRIGVHL GLFLSCVRGNGSFEQLNYWALTKEAAYVKNIYGCFAMTEIAHGSNVAGLETTATFNEEND EFVINTPHIGATKWWIGGAAHSATHAAVYARLIVHGKDYGVKTFVVPLRDSNHDLMPGVS VGDIGAKMGRDGIDNGWIQFSGVRIPRFFMLQKFTKVTAEGKVTLPPNNQLSYSALLGGR VVMVKDAFRWSSRVITIALRYAVGRRQFKASKAGENDKENQLLDYPLHQRRLIPLLAMTY AFSNGSNVLQELSHKTMDELDDAVAEDDKAGIDKGIEAMKSLFVASGSLKSTCTWLTLST IDQCRQACGGHGYSAYSGFGKIYNDWAVQCTWEGDNNILGMSIGKQLVKSISSVLRDGQN VTGILEFLTDSKKYLNRDVILQNEDMNDTRKVLHAVEVAIIRASNQALTTLDAHGEDWDF IGANLVQLSKLLAHFFLLKAFLDKVDSIEEKELVPVLDKLAQLYSATIILEEFSGIFLTY SVVSTESISILTDQHIPKLCKDLRPHVIPLTDSFQLSDMMINSSLGSYNGDIYENYFKIV KEANPPFNHKAPYSTDLEAMLNRPSQEDRQRHEYSDEAEEILSK*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA2C01078p