HomeDEHA2B11572g
similar to uniprot|Q12400 Saccharomyces cerevisiae YOL093W TRM10 tRNA methyltransferase, methylates the N-1 position of guanosine in tRNAs
Element type: CDS
Element length: 1170 nucleotides,
on anti-sense strand of
Deha2B: complement(906183..907352).
Other names:
DEHA-CDS3263.1
DEHA-IPF10065
DEHA0B11814g
Coding sequence: 390 codons.
Element length: 1170 nucleotides,
on anti-sense strand of
Deha2B: complement(906183..907352).
Other names:
DEHA-CDS3263.1
DEHA-IPF10065
DEHA0B11814g
Coding sequence: 390 codons.
Homologs and Orthologs
Homologs in protein families: GL3R1757 GL3R1757.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2B11572p 
similar to uniprot|Q12400 Saccharomyces cerevisiae YOL093W TRM10 tRNA methyltransferase
Protein domain map
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>DEHA2B11572g.nt GTTAAGCAATGATGGGCTTATCCTTAACCCACATACTCAGATGGCGATTCACAAATTTAA TCAATTTAATCTTGCATTTTCTGTAAGAATTGGGTACAAGTATCACGACATGCTGAGCAA TTACGATCATCCACGTCTTATGAAGGAATACGTGGAGTATCGAAAGAAGTTTGACAAAAT TTCGAATTTATTGAAGAACAACAAAACAATTGGAAACCTTTTGCTTGGTTTAATGTCCAA GATTTCAGATCGATACTTTTATGCGTGGAGGGTGGTACAGGCTCAGAAATACCTTTTATC AATTATCAACAATCCTGAGTTTTACAGTAATATTCCAGCAAATTCACGAGGCATAAATCG GCTAAAACTTAATAACTTACAACTAGATGATATGGAAACGTTAACGTATTCTTTGGGCAA AGACCTAGAGACGATAGTTAACTATCGAGATTCTGTAGATGTAGATATCGAGACTGCAAC CTACAATTCATCGAGCAAGTCTAGACGTGGCACGGTTGTCGGAAATACTTTTCCTACTAA TGATAATGAAAATAAAACGAAAACGAAAACGAATATTGACACTAACACTGATCTTGGTTC CAACTTAGACTTCCCTCCGTCGATGATGTCCAATGAGTCCCCGCTTCAGGATTTTATCTA CCCTAATAACGAAGAGATTGACCAAATGTGGCTCCTGGTTATGGCACTGAAGTATGATCC AATGGAGCTTTTATCCGGAGATTTTGATCCAATTGGGTATTTTAATCAACAACTTCAGAC TACTATTAGTGATCGTCTTGAAACCGACCTAAATAATCCAATATTTGAATGAAAAGAAGA ATATCGATGAATGTAACATCAGGACATTCATTATTGGTGTATGCAGCTTACAAGCTTGTA GCTAGTCTTTGTAAACACTGTTTTATATGTACATAAATCATTTTGCAGTCGTGTATGTAA TCTTTCAAGTCAAAATCTGCGAGATAAATTTTTTTTCAAGATGAATTATAATGTTGATGC TATTGATAGTCAAATGGCAGATAATAACGTAGATATAGTACAGGCAGACGCCATCATTTC GAAGGAGATGGAAAATCAGGATACCGAACAATCGCAAAAAAGAAGCGGATCCGAAGTCGA GAAAGATGATTTTAAGCGGCAGAAGGTAGTTGTACCAGAGGGTATGACCAAACGAGAATA CAAGAGACAATTGAAACAGCAACGTTGGGAGGAAACCAAAGATGAATACAAACAGAAGAA AAGAGAAAAGAAGAAGGCAGCCAGAGAACGTCGTAAGGAACGCATAAAAGAGGCCGAAGC CAATGGGGAAACAAACGAAGAGCTCTACAACTATCATCAGATGAAGCGAGCCAAGGTAGC ACCTCAAGAACAGATAGATACCGACGTTAAAATAATAATGGACTGTGAATTTGACTCGCT TATGAACGACAAGGAGATCGTGTCATTGTCGAACCAGATCACCAGATCGTACTCGGCCAA GAAACACAGCACGTACGACGTGCAATTGGACATCACGTCATTCAACAAGAACTTGAAGAA ACGATTCGAAAAGGCCATTCCGCAGTACGACAAGTGGACCAACGTGACATTTGTCGAAAA CGATAAATTAGAGGATATATTGCCAATGGACGACAAACAAGCTCTCAGCAAGTATGTGTA TTTGACGGCCGACACCGACGAGGTTATCGACACCCTCGAGCCACACCACACGTATATAAT TGGCGGCATTGTGGACAAAAACAGGTACAAGAACTTGTGTCTTAACAAGGCCCAATCGCT TGGTCTTAAAATCGGCAGATTGCCCATCGACAAATTCATTAAGATGAACGGAAGACAGGT TCTAGCCACGTCACATGTATTTGAATTGTGTTGCAAGTGGTTTGAGAACGACAAGGACTG GGGGAAGGCCTTTAACGAGGTTCTTCCACCAAGAAAGGTGAAGGGCAAGCTCACACACGG GTCTGACCCAGAGAAATCCATTGAGCCATCTGAGGTCTCTGAGCAGCCTGTGCTGTCTGA GCAGTCTGAACAACCTGTATTGTCTGAACAACCTGTGCTGTCTGAACAACCTGTATTGTC TGAACAGCCTGTATTGTCTGAATCATCAGACGAACCATCAGACGAACCATCCAAAGGTGC CGACCACTAGTCCACCTAGTACGTCTCTCCCAGTGCAACCCATCACGTGTAATATCACCT GATCTAAGTATCGGATACATCCTTTGTACCGTATACACGACCATTTTCGGAAGTATACCT GTATTGTTTTTCCTCACTGCGATCGAGGCCACGATGGCCCATGTACGCTACATTCACTCT GTGTGCCATTGCATCATACTGCCATATGCGATATCGCGACATCGCGACATCCATATCGTC CCTGCTCCCAGCCCTTTGATCTGCTCCAACCTGTGTATAGAGCAACTATTAATAACATAC TACTTTTACA
Coding sequence
>DEHA2B11572g.cds ATGAATTATAATGTTGATGCTATTGATAGTCAAATGGCAGATAATAACGTAGATATAGTA CAGGCAGACGCCATCATTTCGAAGGAGATGGAAAATCAGGATACCGAACAATCGCAAAAA AGAAGCGGATCCGAAGTCGAGAAAGATGATTTTAAGCGGCAGAAGGTAGTTGTACCAGAG GGTATGACCAAACGAGAATACAAGAGACAATTGAAACAGCAACGTTGGGAGGAAACCAAA GATGAATACAAACAGAAGAAAAGAGAAAAGAAGAAGGCAGCCAGAGAACGTCGTAAGGAA CGCATAAAAGAGGCCGAAGCCAATGGGGAAACAAACGAAGAGCTCTACAACTATCATCAG ATGAAGCGAGCCAAGGTAGCACCTCAAGAACAGATAGATACCGACGTTAAAATAATAATG GACTGTGAATTTGACTCGCTTATGAACGACAAGGAGATCGTGTCATTGTCGAACCAGATC ACCAGATCGTACTCGGCCAAGAAACACAGCACGTACGACGTGCAATTGGACATCACGTCA TTCAACAAGAACTTGAAGAAACGATTCGAAAAGGCCATTCCGCAGTACGACAAGTGGACC AACGTGACATTTGTCGAAAACGATAAATTAGAGGATATATTGCCAATGGACGACAAACAA GCTCTCAGCAAGTATGTGTATTTGACGGCCGACACCGACGAGGTTATCGACACCCTCGAG CCACACCACACGTATATAATTGGCGGCATTGTGGACAAAAACAGGTACAAGAACTTGTGT CTTAACAAGGCCCAATCGCTTGGTCTTAAAATCGGCAGATTGCCCATCGACAAATTCATT AAGATGAACGGAAGACAGGTTCTAGCCACGTCACATGTATTTGAATTGTGTTGCAAGTGG TTTGAGAACGACAAGGACTGGGGGAAGGCCTTTAACGAGGTTCTTCCACCAAGAAAGGTG AAGGGCAAGCTCACACACGGGTCTGACCCAGAGAAATCCATTGAGCCATCTGAGGTCTCT GAGCAGCCTGTGCTGTCTGAGCAGTCTGAACAACCTGTATTGTCTGAACAACCTGTGCTG TCTGAACAACCTGTATTGTCTGAACAGCCTGTATTGTCTGAATCATCAGACGAACCATCA GACGAACCATCCAAAGGTGCCGACCACTAG
Predicted translation product
>DEHA2B11572g.aa MNYNVDAIDSQMADNNVDIVQADAIISKEMENQDTEQSQKRSGSEVEKDDFKRQKVVVPE GMTKREYKRQLKQQRWEETKDEYKQKKREKKKAARERRKERIKEAEANGETNEELYNYHQ MKRAKVAPQEQIDTDVKIIMDCEFDSLMNDKEIVSLSNQITRSYSAKKHSTYDVQLDITS FNKNLKKRFEKAIPQYDKWTNVTFVENDKLEDILPMDDKQALSKYVYLTADTDEVIDTLE PHHTYIIGGIVDKNRYKNLCLNKAQSLGLKIGRLPIDKFIKMNGRQVLATSHVFELCCKW FENDKDWGKAFNEVLPPRKVKGKLTHGSDPEKSIEPSEVSEQPVLSEQSEQPVLSEQPVL SEQPVLSEQPVLSESSDEPSDEPSKGADH*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA2B11572p