HomeDEHA2B01672g
similar to uniprot|P32775 Saccharomyces cerevisiae YEL011w GLC3 Glycogen branching enzyme, involved in glycogen accumulation
Element type: CDS
Element length: 2136 nucleotides,
on anti-sense strand of
Deha2B: complement(131761..133896).
Other names:
DEHA-CDS1101.1
DEHA-IPF9250
DEHA0B01650g
Coding sequence: 712 codons.
Element length: 2136 nucleotides,
on anti-sense strand of
Deha2B: complement(131761..133896).
Other names:
DEHA-CDS1101.1
DEHA-IPF9250
DEHA0B01650g
Coding sequence: 712 codons.
Homologs and Orthologs
Homologs in protein families: GL3R2291 GL3R2291.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2B01672p 
similar to uniprot|P32775 Saccharomyces cerevisiae YEL011w GLC3 glycogen branching enzyme
Protein domain map
Database cross references:
InterPro: IPR004193
InterPro: IPR006047
InterPro: IPR006048
InterPro: IPR013780
InterPro: IPR013781
InterPro: IPR013783
UniProtKB/Swiss-Prot: Q6BXN1
InterPro: IPR004193
InterPro: IPR006047
InterPro: IPR006048
InterPro: IPR013780
InterPro: IPR013781
InterPro: IPR013783
UniProtKB/Swiss-Prot: Q6BXN1
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>DEHA2B01672g.nt ACATAACCCAATCGTTTGATGATTATCAGAGACAAAATATCTGGCATGAATTTAAGGAAA CCATGTTGGAAGTACCAGAAAAAAAGTTCAACACCTCAAATACGAGTCAAGCCAACAGCT TAAAGGAAATATATTCTCAAGATTCTAATAAGAGGCTATTTGAATTACCGACCGGACAAT CATTAGAATTATGCCTTGAAAGATTCCAGTTGGCCGACTCGTTATTTGACCCACAAAGCT ACAAGTTTAACAACCCAGATCTCGCAACTAAGTATCCACCAAGCAATGGTGAGTTATCAT TAACGAATTCGTACGACGATTACAAGCCTTTGAAGAGAGCCCGTAAAGCCGAATCAAACC AATCAACACCACCTCCTTCAGATGCAAAGAAACCCTCGAGTAAGACATCCCAGATTAGAG GTTTAACTCATTTGATAACCCACACATTATCAACTATCGATATTGACTTAAGATCGTCTG TTGCGCACAATATTATCGTCACCGGTGGTGTTTCGTTGATTCCACAATTGACAGAGAGAC TATACTCCGAGTTATCTAATTCGAATCCGGGTTTGAAGATAAGACTACACGCAGTGGGTA ACTCTTCTGAAAGGTTCAACCAAGCCTGGATCGGTGGTAGTGTTCTTGCATCGTTAGGTA CCTTCCACCAAATGTGGGTCAGCAAGCAAGAATACGAAGAAGCCGGGGCAGAAAGGATTT TAAACCAGAGATTCAGATAGTGGCCCCGAACTCGGCCACTTCATTCTATATACCTATATA CTTATTTTACATCTATATAGATATAGAGTTATTGTATAATTAGACAGTTCTTTTTGATAA GTAATTATATACAGGTTTACCCAGCATAAATAGTTGGGGGCGTCTTACGGAGGACTATAA GGCGTTATCTATATTTCATTTGAACAACTTTCTTTCATAGCAATTGACAATTTTTCTTTC ATTTTTCCTTAAGTAACCTAGTCAAGTAAAAGCTTATAACATGTCGTTATCTACAGGTTC CACAGGTTCAGAGAGAAGTAATCAATCCTTGATTAAGGGCGCATTAGATTTAGACCCTTG GTTAGAACCCTTCTCTGGACAATTGATACACCGTCAATTAAACTTGAGAAAATGGTACGA TGAATTCAAACAGAATGAAGGTAGTTTAACTAACTTTGCATCTGCGTATGAAAAGTATGG TTTGCATGCTAATTGGGATACTAAGGAAGTGTTCATTAACGAATATATTCCAAATGTGGT AGAGGTTTCGTTGGTAGGGGATTTTAATAATTGGGACACTAACACCCATAAATTGAAACC AGTAAATGATTTTGGACTTTGGTCATTGACAATCAAGCCAACAGAGAACAATGAATTTGC TGTCCCGCATGACTCCAGATATAAGATTTCGATGGTCACCGCAAGTGGAGAGCGAATCTA CAGATTATGTCCATGGTTGAAAAGGGCTACACCTTCTACTGAAAACAACTTGTATGAGGG AAGGTTTTGGAATCCACAGCCGACTGAAACATATAAATTCAAGCATGAGAGACCAAGACT TGAAAGCAAGGATGGTATAAAAATTTACGAAGCTCATGTGGGTATTTCTACCCCGGAACC AAAAGTTGGGTCATATAAGAACTTCACAACTAAGGTGTTGCCTGTTATCCATAAGTTAGG ATATAACACTATTCAATTAATGGCGGTTATGGAGCATGCTTATTATGCGTCGTTCGGTTA TCAGGTCACTAATTTTTTTGCAATTTCTTCTCGTTTTGGCACGCCAGAAGATTTGAAAGA ATTAATTGACGAAGCCCATAGATTGGGTATTAGAGTTTTGCTAGATGTGGTTCATTCCCA TAGTTCTAAAAATGTTGAAGATGGTTTGAATATGTTTAATGGTACGGATCACTATTTATT CCATGGTGGCACTAAGGGTTCGCATGAATTATGGGATTCTAGATTATTCAATTACTCTAA CTACGAAACCTTGAGATTCTTGTTGTCAAACTTGAGGTTTTATATTGATGTCTTTAAATT TGATGGATTCAGATTTGATGGCGTCACAAGTATGTTATACAAACATCATGGCTTGAGTTT TGGATTTAGTGGTGATTACAATGAATATTTCAATTCTGAGTGGGTCGATAATGACGCAAT AACATATTTAATGTTGGGCCATAAATTATTAGATGAGATCAGTGTAAGAGAAAACAACTA CAAATTTGTCTCCATTGCTGAAGATGTTAGTGGTATGCCAACATTGTGCTTACCGATCGG TCAGGGTGGTATTGGATTTGACTACAGGTTATCTATGGCTATTCCAGATATGTGGATTAA GATTATTAAACATTTGAGTGATGAAGAATGGGATATGGGAAGCCTTGTGCATACCTTAAC TAATAGAAGACATGGTGAAAGGTGTATTAGTTATTGTGAATCCCATGATCAAGCATTAGT GGGTGATAAGACCATTGCTTTTTGGTTAATGGATAAAGAAATGTACACCAATATGTCAAC ATTGACTCCTTTCACGCCAGTTATCGATAGAGGTATTGCGTTGCATAAAATGATTAGGTT AATTACTTTCTCTTTAGGGGGAGAAGGTTATTTAAATTTCGAAGGCAATGAGTTTGGCCA CCCTGAATGGTTAGACTTTCCAAGAAAAGGAAACGGCGAATCATATGCTTATGCCAGAAG ACAATTCAATTTAATTGAAGATGATTTATTGCGTTACAAGTTTTTGTTTGCTTTTGATGG TGCAATGCAACATTTAGATACCAAGTATGGTATATTGTTGTCTTCGCAAGCCTATGTATC TTTGAAAAATGAAAATGATAAGGTTATTGTCTTTGAAAGAAACGGCTTATTATTCATTTT TAATTTTCATCCTACCAATTCTTATGCTGATTACAAGATTGGGGTAGAAACCCCAGGTGT CTACCAAATAGTTTTAAACTCGGACAGTCTTAGTTTCGGAGGTCATGGTAGAATTGAAGA AACAAACAAAGAAACGGGTGAAAAATTACAATTCTTCACTAACAATGAAAGATGGAATGA TAGATCTAATGCATTATTTTGTTATATTCCATCAAGAACGGCAATTGTCCTTCAAGTCAA GGAAAAAGTCGTTTAGGTTGCCTAATTCAATTCTCTTAAAATTTTTATTAATACTATATA AAATTTGATTCATTTATCGTAAAATGTAAATAAGAAGCATTATTATTATTTTTTATTAAC AGTCATCACCGTCTGGTAAATTTTCGAACTTTCCCAGTTGTTGCCATTCTCTTACTGGAT TCTTAAACCCTTGGAAAGCACCATTCTTTTCCATTCTATCGAAAAGTACAAATAGTTTTT CGGCTTCCAATTCTTTTTCTTTGTTACTAAGATTATTGGTATTCGTAGGTTTATCCTTAG TAAATATCGTGTCTAA
Coding sequence
>DEHA2B01672g.cds ATGTCGTTATCTACAGGTTCCACAGGTTCAGAGAGAAGTAATCAATCCTTGATTAAGGGC GCATTAGATTTAGACCCTTGGTTAGAACCCTTCTCTGGACAATTGATACACCGTCAATTA AACTTGAGAAAATGGTACGATGAATTCAAACAGAATGAAGGTAGTTTAACTAACTTTGCA TCTGCGTATGAAAAGTATGGTTTGCATGCTAATTGGGATACTAAGGAAGTGTTCATTAAC GAATATATTCCAAATGTGGTAGAGGTTTCGTTGGTAGGGGATTTTAATAATTGGGACACT AACACCCATAAATTGAAACCAGTAAATGATTTTGGACTTTGGTCATTGACAATCAAGCCA ACAGAGAACAATGAATTTGCTGTCCCGCATGACTCCAGATATAAGATTTCGATGGTCACC GCAAGTGGAGAGCGAATCTACAGATTATGTCCATGGTTGAAAAGGGCTACACCTTCTACT GAAAACAACTTGTATGAGGGAAGGTTTTGGAATCCACAGCCGACTGAAACATATAAATTC AAGCATGAGAGACCAAGACTTGAAAGCAAGGATGGTATAAAAATTTACGAAGCTCATGTG GGTATTTCTACCCCGGAACCAAAAGTTGGGTCATATAAGAACTTCACAACTAAGGTGTTG CCTGTTATCCATAAGTTAGGATATAACACTATTCAATTAATGGCGGTTATGGAGCATGCT TATTATGCGTCGTTCGGTTATCAGGTCACTAATTTTTTTGCAATTTCTTCTCGTTTTGGC ACGCCAGAAGATTTGAAAGAATTAATTGACGAAGCCCATAGATTGGGTATTAGAGTTTTG CTAGATGTGGTTCATTCCCATAGTTCTAAAAATGTTGAAGATGGTTTGAATATGTTTAAT GGTACGGATCACTATTTATTCCATGGTGGCACTAAGGGTTCGCATGAATTATGGGATTCT AGATTATTCAATTACTCTAACTACGAAACCTTGAGATTCTTGTTGTCAAACTTGAGGTTT TATATTGATGTCTTTAAATTTGATGGATTCAGATTTGATGGCGTCACAAGTATGTTATAC AAACATCATGGCTTGAGTTTTGGATTTAGTGGTGATTACAATGAATATTTCAATTCTGAG TGGGTCGATAATGACGCAATAACATATTTAATGTTGGGCCATAAATTATTAGATGAGATC AGTGTAAGAGAAAACAACTACAAATTTGTCTCCATTGCTGAAGATGTTAGTGGTATGCCA ACATTGTGCTTACCGATCGGTCAGGGTGGTATTGGATTTGACTACAGGTTATCTATGGCT ATTCCAGATATGTGGATTAAGATTATTAAACATTTGAGTGATGAAGAATGGGATATGGGA AGCCTTGTGCATACCTTAACTAATAGAAGACATGGTGAAAGGTGTATTAGTTATTGTGAA TCCCATGATCAAGCATTAGTGGGTGATAAGACCATTGCTTTTTGGTTAATGGATAAAGAA ATGTACACCAATATGTCAACATTGACTCCTTTCACGCCAGTTATCGATAGAGGTATTGCG TTGCATAAAATGATTAGGTTAATTACTTTCTCTTTAGGGGGAGAAGGTTATTTAAATTTC GAAGGCAATGAGTTTGGCCACCCTGAATGGTTAGACTTTCCAAGAAAAGGAAACGGCGAA TCATATGCTTATGCCAGAAGACAATTCAATTTAATTGAAGATGATTTATTGCGTTACAAG TTTTTGTTTGCTTTTGATGGTGCAATGCAACATTTAGATACCAAGTATGGTATATTGTTG TCTTCGCAAGCCTATGTATCTTTGAAAAATGAAAATGATAAGGTTATTGTCTTTGAAAGA AACGGCTTATTATTCATTTTTAATTTTCATCCTACCAATTCTTATGCTGATTACAAGATT GGGGTAGAAACCCCAGGTGTCTACCAAATAGTTTTAAACTCGGACAGTCTTAGTTTCGGA GGTCATGGTAGAATTGAAGAAACAAACAAAGAAACGGGTGAAAAATTACAATTCTTCACT AACAATGAAAGATGGAATGATAGATCTAATGCATTATTTTGTTATATTCCATCAAGAACG GCAATTGTCCTTCAAGTCAAGGAAAAAGTCGTTTAG
Predicted translation product
>DEHA2B01672g.aa MSLSTGSTGSERSNQSLIKGALDLDPWLEPFSGQLIHRQLNLRKWYDEFKQNEGSLTNFA SAYEKYGLHANWDTKEVFINEYIPNVVEVSLVGDFNNWDTNTHKLKPVNDFGLWSLTIKP TENNEFAVPHDSRYKISMVTASGERIYRLCPWLKRATPSTENNLYEGRFWNPQPTETYKF KHERPRLESKDGIKIYEAHVGISTPEPKVGSYKNFTTKVLPVIHKLGYNTIQLMAVMEHA YYASFGYQVTNFFAISSRFGTPEDLKELIDEAHRLGIRVLLDVVHSHSSKNVEDGLNMFN GTDHYLFHGGTKGSHELWDSRLFNYSNYETLRFLLSNLRFYIDVFKFDGFRFDGVTSMLY KHHGLSFGFSGDYNEYFNSEWVDNDAITYLMLGHKLLDEISVRENNYKFVSIAEDVSGMP TLCLPIGQGGIGFDYRLSMAIPDMWIKIIKHLSDEEWDMGSLVHTLTNRRHGERCISYCE SHDQALVGDKTIAFWLMDKEMYTNMSTLTPFTPVIDRGIALHKMIRLITFSLGGEGYLNF EGNEFGHPEWLDFPRKGNGESYAYARRQFNLIEDDLLRYKFLFAFDGAMQHLDTKYGILL SSQAYVSLKNENDKVIVFERNGLLFIFNFHPTNSYADYKIGVETPGVYQIVLNSDSLSFG GHGRIEETNKETGEKLQFFTNNERWNDRSNALFCYIPSRTAIVLQVKEKVV*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA2B01672p