DEHA2B01672g

similar to uniprot|P32775 Saccharomyces cerevisiae YEL011w GLC3 glycogen branching enzyme

Genomic environment map

Element type: CDS
Element length: 2136 nucleotides,
on anti-sense strand of
Deha2B: complement(131761..133896).
Other names:
DEHA-CDS1101.1
DEHA-IPF9250
DEHA0B01650g
Coding sequence: 712 codons.

Database cross references:
EMBL: CR382134
GeneID: 2913696
GenomeReviews: CR382134_GR
HOGENOM: HBG302308

Computed results

None available yet

Homologs and Orthologs

Génolevures family GL3R2291
Robust family of 11 members, sczltkgdpy (1 1 1 1 1 1 1 1 2 1)
11-member family, phyletic pattern sczltkgdy, profile (1 1 1 1 1 1 1 1 1)
Proteins: YALI0C06798p PISO0N24235p PISO0M23948p DEHA2B01672p ERGO0E07282p KLLA0A11176p KLTH0H13794p SAKL0D10538p ZYRO0E03828p CAGL0M03377p SACE0E01650p
Search in: Génolevures Google

Homologs in protein family: GL3R2291
Orthologs: strict determination not possible; homologs must be refined manually

Protein DEHA2B01672p

similar to uniprot|P32775 Saccharomyces cerevisiae YEL011w GLC3 glycogen branching enzyme; RecName: Full=1,4-alpha-glucan-branching enzyme; EC=2.4.1.18; AltName: Full=Glycogen-branching enzyme;

Protein domain map

Protein length: 711 amino acids
Protein family: GL3R2291

Database cross references:
Gene3D: G3DSA:2.60.40.10
Gene3D: G3DSA:2.60.40.1180
Gene3D: G3DSA:3.20.20.80
InterPro: IPR004193
InterPro: IPR006047
InterPro: IPR006048
InterPro: IPR006407
InterPro: IPR013780
InterPro: IPR013781
InterPro: IPR013783
InterPro: IPR014756
InterPro: IPR015902
InterPro: IPR017853
KEGG: dha:DEHA2B01672g
PANTHER: PTHR10357
PIRSF: PIRSF000463
Pfam: PF00128
Pfam: PF02806
Pfam: PF02922
RefSeq: XP_457038.1
UniProtKB/Swiss-Prot: Q6BXN1
UniProtKB: GLGB_DEBHA

Computed results for DEHA2B01672p

Blastp Genolevures

Blastp Uniprot

Gene Ontology terms

Sequence data

>DEHA2B01672g.nt
ATGTCGTTATCTACAGGTTCCACAGGTTCAGAGAGAAGTAATCAATCCTTGATTAAGGGC
GCATTAGATTTAGACCCTTGGTTAGAACCCTTCTCTGGACAATTGATACACCGTCAATTA
AACTTGAGAAAATGGTACGATGAATTCAAACAGAATGAAGGTAGTTTAACTAACTTTGCA
TCTGCGTATGAAAAGTATGGTTTGCATGCTAATTGGGATACTAAGGAAGTGTTCATTAAC
GAATATATTCCAAATGTGGTAGAGGTTTCGTTGGTAGGGGATTTTAATAATTGGGACACT
AACACCCATAAATTGAAACCAGTAAATGATTTTGGACTTTGGTCATTGACAATCAAGCCA
ACAGAGAACAATGAATTTGCTGTCCCGCATGACTCCAGATATAAGATTTCGATGGTCACC
GCAAGTGGAGAGCGAATCTACAGATTATGTCCATGGTTGAAAAGGGCTACACCTTCTACT
GAAAACAACTTGTATGAGGGAAGGTTTTGGAATCCACAGCCGACTGAAACATATAAATTC
AAGCATGAGAGACCAAGACTTGAAAGCAAGGATGGTATAAAAATTTACGAAGCTCATGTG
GGTATTTCTACCCCGGAACCAAAAGTTGGGTCATATAAGAACTTCACAACTAAGGTGTTG
CCTGTTATCCATAAGTTAGGATATAACACTATTCAATTAATGGCGGTTATGGAGCATGCT
TATTATGCGTCGTTCGGTTATCAGGTCACTAATTTTTTTGCAATTTCTTCTCGTTTTGGC
ACGCCAGAAGATTTGAAAGAATTAATTGACGAAGCCCATAGATTGGGTATTAGAGTTTTG
CTAGATGTGGTTCATTCCCATAGTTCTAAAAATGTTGAAGATGGTTTGAATATGTTTAAT
GGTACGGATCACTATTTATTCCATGGTGGCACTAAGGGTTCGCATGAATTATGGGATTCT
AGATTATTCAATTACTCTAACTACGAAACCTTGAGATTCTTGTTGTCAAACTTGAGGTTT
TATATTGATGTCTTTAAATTTGATGGATTCAGATTTGATGGCGTCACAAGTATGTTATAC
AAACATCATGGCTTGAGTTTTGGATTTAGTGGTGATTACAATGAATATTTCAATTCTGAG
TGGGTCGATAATGACGCAATAACATATTTAATGTTGGGCCATAAATTATTAGATGAGATC
AGTGTAAGAGAAAACAACTACAAATTTGTCTCCATTGCTGAAGATGTTAGTGGTATGCCA
ACATTGTGCTTACCGATCGGTCAGGGTGGTATTGGATTTGACTACAGGTTATCTATGGCT
ATTCCAGATATGTGGATTAAGATTATTAAACATTTGAGTGATGAAGAATGGGATATGGGA
AGCCTTGTGCATACCTTAACTAATAGAAGACATGGTGAAAGGTGTATTAGTTATTGTGAA
TCCCATGATCAAGCATTAGTGGGTGATAAGACCATTGCTTTTTGGTTAATGGATAAAGAA
ATGTACACCAATATGTCAACATTGACTCCTTTCACGCCAGTTATCGATAGAGGTATTGCG
TTGCATAAAATGATTAGGTTAATTACTTTCTCTTTAGGGGGAGAAGGTTATTTAAATTTC
GAAGGCAATGAGTTTGGCCACCCTGAATGGTTAGACTTTCCAAGAAAAGGAAACGGCGAA
TCATATGCTTATGCCAGAAGACAATTCAATTTAATTGAAGATGATTTATTGCGTTACAAG
TTTTTGTTTGCTTTTGATGGTGCAATGCAACATTTAGATACCAAGTATGGTATATTGTTG
TCTTCGCAAGCCTATGTATCTTTGAAAAATGAAAATGATAAGGTTATTGTCTTTGAAAGA
AACGGCTTATTATTCATTTTTAATTTTCATCCTACCAATTCTTATGCTGATTACAAGATT
GGGGTAGAAACCCCAGGTGTCTACCAAATAGTTTTAAACTCGGACAGTCTTAGTTTCGGA
GGTCATGGTAGAATTGAAGAAACAAACAAAGAAACGGGTGAAAAATTACAATTCTTCACT
AACAATGAAAGATGGAATGATAGATCTAATGCATTATTTTGTTATATTCCATCAAGAACG
GCAATTGTCCTTCAAGTCAAGGAAAAAGTCGTTTAG

>DEHA2B01672g.cds
ATGTCGTTATCTACAGGTTCCACAGGTTCAGAGAGAAGTAATCAATCCTTGATTAAGGGC
GCATTAGATTTAGACCCTTGGTTAGAACCCTTCTCTGGACAATTGATACACCGTCAATTA
AACTTGAGAAAATGGTACGATGAATTCAAACAGAATGAAGGTAGTTTAACTAACTTTGCA
TCTGCGTATGAAAAGTATGGTTTGCATGCTAATTGGGATACTAAGGAAGTGTTCATTAAC
GAATATATTCCAAATGTGGTAGAGGTTTCGTTGGTAGGGGATTTTAATAATTGGGACACT
AACACCCATAAATTGAAACCAGTAAATGATTTTGGACTTTGGTCATTGACAATCAAGCCA
ACAGAGAACAATGAATTTGCTGTCCCGCATGACTCCAGATATAAGATTTCGATGGTCACC
GCAAGTGGAGAGCGAATCTACAGATTATGTCCATGGTTGAAAAGGGCTACACCTTCTACT
GAAAACAACTTGTATGAGGGAAGGTTTTGGAATCCACAGCCGACTGAAACATATAAATTC
AAGCATGAGAGACCAAGACTTGAAAGCAAGGATGGTATAAAAATTTACGAAGCTCATGTG
GGTATTTCTACCCCGGAACCAAAAGTTGGGTCATATAAGAACTTCACAACTAAGGTGTTG
CCTGTTATCCATAAGTTAGGATATAACACTATTCAATTAATGGCGGTTATGGAGCATGCT
TATTATGCGTCGTTCGGTTATCAGGTCACTAATTTTTTTGCAATTTCTTCTCGTTTTGGC
ACGCCAGAAGATTTGAAAGAATTAATTGACGAAGCCCATAGATTGGGTATTAGAGTTTTG
CTAGATGTGGTTCATTCCCATAGTTCTAAAAATGTTGAAGATGGTTTGAATATGTTTAAT
GGTACGGATCACTATTTATTCCATGGTGGCACTAAGGGTTCGCATGAATTATGGGATTCT
AGATTATTCAATTACTCTAACTACGAAACCTTGAGATTCTTGTTGTCAAACTTGAGGTTT
TATATTGATGTCTTTAAATTTGATGGATTCAGATTTGATGGCGTCACAAGTATGTTATAC
AAACATCATGGCTTGAGTTTTGGATTTAGTGGTGATTACAATGAATATTTCAATTCTGAG
TGGGTCGATAATGACGCAATAACATATTTAATGTTGGGCCATAAATTATTAGATGAGATC
AGTGTAAGAGAAAACAACTACAAATTTGTCTCCATTGCTGAAGATGTTAGTGGTATGCCA
ACATTGTGCTTACCGATCGGTCAGGGTGGTATTGGATTTGACTACAGGTTATCTATGGCT
ATTCCAGATATGTGGATTAAGATTATTAAACATTTGAGTGATGAAGAATGGGATATGGGA
AGCCTTGTGCATACCTTAACTAATAGAAGACATGGTGAAAGGTGTATTAGTTATTGTGAA
TCCCATGATCAAGCATTAGTGGGTGATAAGACCATTGCTTTTTGGTTAATGGATAAAGAA
ATGTACACCAATATGTCAACATTGACTCCTTTCACGCCAGTTATCGATAGAGGTATTGCG
TTGCATAAAATGATTAGGTTAATTACTTTCTCTTTAGGGGGAGAAGGTTATTTAAATTTC
GAAGGCAATGAGTTTGGCCACCCTGAATGGTTAGACTTTCCAAGAAAAGGAAACGGCGAA
TCATATGCTTATGCCAGAAGACAATTCAATTTAATTGAAGATGATTTATTGCGTTACAAG
TTTTTGTTTGCTTTTGATGGTGCAATGCAACATTTAGATACCAAGTATGGTATATTGTTG
TCTTCGCAAGCCTATGTATCTTTGAAAAATGAAAATGATAAGGTTATTGTCTTTGAAAGA
AACGGCTTATTATTCATTTTTAATTTTCATCCTACCAATTCTTATGCTGATTACAAGATT
GGGGTAGAAACCCCAGGTGTCTACCAAATAGTTTTAAACTCGGACAGTCTTAGTTTCGGA
GGTCATGGTAGAATTGAAGAAACAAACAAAGAAACGGGTGAAAAATTACAATTCTTCACT
AACAATGAAAGATGGAATGATAGATCTAATGCATTATTTTGTTATATTCCATCAAGAACG
GCAATTGTCCTTCAAGTCAAGGAAAAAGTCGTTTAG

>DEHA2B01672g.aa
MSLSTGSTGSERSNQSLIKGALDLDPWLEPFSGQLIHRQLNLRKWYDEFKQNEGSLTNFA
SAYEKYGLHANWDTKEVFINEYIPNVVEVSLVGDFNNWDTNTHKLKPVNDFGLWSLTIKP
TENNEFAVPHDSRYKISMVTASGERIYRLCPWLKRATPSTENNLYEGRFWNPQPTETYKF
KHERPRLESKDGIKIYEAHVGISTPEPKVGSYKNFTTKVLPVIHKLGYNTIQLMAVMEHA
YYASFGYQVTNFFAISSRFGTPEDLKELIDEAHRLGIRVLLDVVHSHSSKNVEDGLNMFN
GTDHYLFHGGTKGSHELWDSRLFNYSNYETLRFLLSNLRFYIDVFKFDGFRFDGVTSMLY
KHHGLSFGFSGDYNEYFNSEWVDNDAITYLMLGHKLLDEISVRENNYKFVSIAEDVSGMP
TLCLPIGQGGIGFDYRLSMAIPDMWIKIIKHLSDEEWDMGSLVHTLTNRRHGERCISYCE
SHDQALVGDKTIAFWLMDKEMYTNMSTLTPFTPVIDRGIALHKMIRLITFSLGGEGYLNF
EGNEFGHPEWLDFPRKGNGESYAYARRQFNLIEDDLLRYKFLFAFDGAMQHLDTKYGILL
SSQAYVSLKNENDKVIVFERNGLLFIFNFHPTNSYADYKIGVETPGVYQIVLNSDSLSFG
GHGRIEETNKETGEKLQFFTNNERWNDRSNALFCYIPSRTAIVLQVKEKVV*

Legend and notes

Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences

Color	Nucleotide sequence and Coding sequence	Predicted translation product
RED	start and stop codons	Initial methionine and sequence end
BLUE	coding sequence	protein sequence
grey	non-coding sequence (upstream, downstream or intron)
grey	donor and acceptor splicing sites

Genetic Elements

DEHA2B01672g

DEHA2B01672g

Genomic environment map

Computed results

Homologs and Orthologs

Protein DEHA2B01672p

Protein domain map

Computed results for DEHA2B01672p

Gene Ontology terms

Sequence data

Nucleotide sequence

Coding sequence

Predicted translation product

Legend and notes