HomeDEHA2F17732g
similar to uniprot|P32597 Saccharomyces cerevisiae YIL126W STH1 ATPase component of the RSC chromatin remodeling complex
Element type: CDS
Element length: 3888 nucleotides,
on sense strand of
Deha2F: 1494477..1498364.
Other names:
DEHA-CDS0181.1
DEHA-IPF7565
DEHA0F19151g
Coding sequence: 1296 codons.
Element length: 3888 nucleotides,
on sense strand of
Deha2F: 1494477..1498364.
Other names:
DEHA-CDS0181.1
DEHA-IPF7565
DEHA0F19151g
Coding sequence: 1296 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0284 GL3C0284.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2F17732p 
similar to uniprot|P32597 Saccharomyces cerevisiae YIL126W STH1 helicase related protein
Protein domain map
Database cross references:
InterPro: IPR000330
InterPro: IPR001487
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014012
InterPro: IPR014021
UniProtKB/TrEMBL: Q6BKZ0
InterPro: IPR000330
InterPro: IPR001487
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014012
InterPro: IPR014021
UniProtKB/TrEMBL: Q6BKZ0
Gene Ontology terms
None available yet
Sequence data
>DEHA2F17732g.nt TTAGCGAGTCTATACTTGTATATACAATATTTTTGACTTTTGCCCTTTTGACCTTCACGT CCAGTCTGACGATTTCCACAGGTGAACTAAAGGAATTCCTTAGCCTTTCTTCTGAAAGCA TTGCAATCTCTTAACCATTGCTTGTAATTATTCAACGAATAGATTCTTTCTCCATAGTAA TCAGGAACTGGATTGGAGAAAGATTGCGACGATGGATCCACCCTGTGATGTTTGATTTTC TGCAAGAAAATCTGGTCTTTTATTTTGAATTGATGCATGGCCGCTTTATTCTTCAAGCTG AACAACGCAGTACCGATGAATGGTCCAAACAAGTATCCAACACCACCACCTAAAATGACG GCACCACCCATGACCATAAACGGGTCCAATCCCATGATAGGTTTATCGACCTGTATTTCG ATGTTTCCTAAGTAAGTCAACGTTATAAATGCACCCGCTAAACTGGTAAATGCCGACGAT GCCACATTAAGCCTATTATTTTGCTTCTTCAAGTTTAAGTACTCGACCCAATTTAATGAC GACTTTCCGCTTGAGTTAAAACGAACCGATCTGCCAATCGTATTGATCAGCCTATTGTAA ATCCCAATATTTTTGAGCATAAGCATATTCTATAGTAATTCCTTCTTTGTACAAATATTG AACCTCCTATTCAATGTCAACCTACGTGATTAGACATAGTATGATCTTCCTTTGCTCGGG AAATTTTCATAGCTTTGTGGTTTTGTGTCATTATCGTCAACTGAACACAAAAACGCGGAA AATTTGGTGAGGATTAATTAAAACTCAACCAAATCGTAACACTACTTGATTCTAGGTCCA ATCAATTAGATAGTTCGGAAATCTAGAGGCTATTTATTAACTGAATAGCGTATATTGTTA CAGGTGTATATAATAATAGCAAATTCAGTCTATATCCGAAAGAGAAGACATTTATTCGTT CATTTTCTTACCCAGTTATTGACCATTAGAAAAAGCGGACATGAGTGAAGGGCCGATCGT AACTAACGGAAACGTTTTACATAACGGTAGCGGGATTGGTGGCGATATATCTGTGTCACG TCAGGCTATTTCTGTATCGTTTCCTGAGACCAGAGAGCAGCTAAACGCATTATTACATAA ATATCAACAATTGATGAAAGCGTCAAATGAAGCGAAGGAAAAGCACGATAATTTTGTTAG ATACCTTGAAAATAAGGAGAATGGTGTAAGCGATTTCAAGGGGACATCTAGTGATGTGAG GCCGGTGTTCAAGGACCCTACAGAAGAGGAAAGATTGGCAATTGAGAATGTTTTTTACAA GATTAGTGAGCAATATCAAGAGTTTGTCAAGAACGAACAGACGTTTTACGAATCTATAAA AGCACAGAAATCGGAAGAATCTTTGGATTTAGAATTGTTAGAGAAACAAATTGCCGGTTT GCAGTTCTTGTCAAAGGATTTGGATTTACCAGAATCGCTACAAGAAGATTACGAATCCGT CATAAATTCCGAAAGTGAGTCTGTTCGTAATAAGGATACAGACAGATTCATTGAGGCATT TTTAAGGTCCAAATCGAATTTGAATGATTTCATGAAAAGGGCTGAATCTTTGGGAATTAA GGTTCCTCAACCTCTTGGCTCGATCAATCCAATGCATGCGCCTGTTGGTAATTATTATAC AGAACAAATGATCTCCTCTAAGATATCAAATCGTATAAGGGAGCTTGAAAATTTGCCTGC AAACTTGGGTACTTTCAAAACTGATTCCTTAAAAAGTCAAACTAACTACGATGATTTGAA AATTAAGGCCTTGATTGAATTAAAATCATTGCAACTTTTAGCAAAGCAAAAGCAATTAAA GAAAAACCTAATTATCAGCCAAGCAACGAACTCACATTATGATAATTCCGATTTAAACAA AGTCCCACTAACATTGCAAGCAAGAAGATCTATATATATCAGGCCAAAAATTATTCAACC AAATCCACATTTGCTCGCTTCACAATTAGAAGAGAAACGTAAATTGGAAGCCAACAGAAT AAAGCACGCATTACACGTTGAAAAAGTTCAACAAATTTTAATCAACTCCGAAGATTTTGT AAATAAAAAGCTTAACCGCTTAAATAAAATTTCGACTATTTCTAGAGCTATCAATCTGTT CCATTCTGTTACCGAAAAGGATGAATCGAAGAAGTTGGAAAAAACTGCTAAACAGCGTTT GCAAGCTTTGAAAGCAAACGATGAAGAGGCATATATTAAATTATTGGATCAAACAAAAGA TCACAGAATTACGCATTTATTAAAGCAAACCAACACATTCTTGGACTCTTTGGCTCAAGC CGTTAAGGTTCAACAAGTCGAACAAGGAGCGGATGATATTTCAGGTGAGAAGCACATCGA GAATGAAGTCGTTCCTGAAAAAGAAGATAATGTAGAGGAATTACGAGAAAAGATAGATTA CTATCAAGTAGCCCATAGAGTCAAAGAAGAAGTAAAAGAACAACCTTCTATTCTTGTAGG AGGTACCTTGAAAGAATATCAAGTAAAGGGTTTGGAATGGATGGTATCTTTATACAATAA TAAATTGAATGGTATTCTTGCAGATGAGATGGGTTTAGGTAAGACTATTCAATCTATATC TTTAATAACCTATTTAATTGAAAGGAAACATGAAGATAAGTTTTTGGTTGTCGTTCCATT GTCAACAATTACAAATTGGACAATGGAGTTTGAAAAATGGGCACCTGCTGTTGATGTTAT TGTTTATAAGGGATCTCAACAACAACGTAAATCCATGCAAGCAGAAGTCAGATCTGGCGC ATTTCAGGTTATTTTGACTACTTACGAATATATTATAAGAGAAAGGCCTTTGTTGTCTAA ATTTTATTATTCTCACATGATTATTGATGAAGGTCACAGAATGAAGAATGCAACTTCTAA ATTATCTATTACTTTGAAGAACTATTATAAGACCAAAAATAGATTGATTTTGACCGGTAC ACCATTACAGAATAATTTACCTGAATTATGGGCATTATTAAATTTCGTTTTGCCAAAAAT TTTTAATTCCGTTAAATCTTTCGATGAATGGTTTAATACACCATTTGCTAATACAGGTTC ACAAGAAAAAATTGAATTAACTGAAGAAGAATCATTATTAGTTATTAGAAGATTGCATAA AGTTTTAAGACCGTTCTTGTTGAGAAGATTGAAGAAAGATGTTGAAAAAGATTTACCTGA CAAAGTTGAAAAAGTTCTTAAATGTAACTTATCTGGTTTGCAATACGTCTTATATCAACA AATGTTGAAACATAACGCATTATTTGTCGGTGTTGACGTTGGAGGAGCGAAGTCTGGTAT TAAGGGTTTAAACAATAAGATTATGCAATTGAGGAAAATTTGTAATCATCCTTTCGTTTT CGAAGAAGTCGAAACCGTATTAAACTCGACCCGTTTAACTAATGATTTAATTTGGAGAGT TAGTGGTAAATTCGAATTACTCGACAGGGTTTTACCTAAATTCAAAGCTTCGGGTCATAG AGTGTTGATTTTCTTCCAAATGACTCAGGTCATGAATATTATGGAAGATTTCTTGAGATG GCGTGACATGAAATATTTAAGGCTTGATGGTGCTACAAAAGCGGAAGATAGGCAGGATAT GTTGAAGGATTTCAATGCACCTAATTCGGATTATTTCTGTTTCCTTTTGTCCACTAGAGC TGGTGGGTTAGGTTTGAATTTACAAACAGCAGACACCGTTATTATTTTTGATACTGATTG GAATCCACATCAAGATTTACAGGCTCAAGATAGAGCGCATCGTATTGGTCAAAAGAATGA GGTTCGTATTTTGAGATTGATTACCAACGATTCTGTTGAAGAAGTCATTTTGGAAAGAGC ACATCAAAAATTAGATATTGATGGTAAAGTTATTCAAGCAGGTAAGTTTGATAATAAATC GACTTCCGAAGAGCAAGAAGCTTTCTTAAAGAGATTATTAGAAGCAGAGGCAAGTAATGA TGACAATGAAGAAAATGATTCATTAGATGATGAAGAGTTGAATGAAGTATTGGCACGTTC AGAGGATGAGAAGGTATTATTCGCACAAATTGATAACGAAAGAATTATCAATGAAAAACT CGCATCCAGACAAGGAGGTCCTAAAACAAGACTATTAGAAAAAGACGAGTTGCCTACTGT TTTCACGGAGGACGTATCACATCATTTCGAGAAAGACACTAAAGAATTAGCTCGTATGAG AGACAAGAAAAGGGTGAAGTATGATGATGGTTTAACTGAAGAACAATGGTTGATGGCTAT GGACAATGACAATGATACAGTCGAAGATGCGATTAGGCGTAAAGAAGTCAGAGTTGCAAA AAGAAGAAAGAATAGAGGAGGGTCTGCTGATTTATTGAGTGATGATGATGAAGATATAGT GGATGGCGACCTAGACGAAGAGAACTTGAGACCAAGAAAAAGATCCCGTCGTTCAACTAC TCCCCAAGCCAATGGCTACACAGATAATGAAGACGACATTTCGGAATTGGAAAAAGTTGA TGACTCGAATGAGTTGGTCGAAAAATGTACTATCGTACTCGACGAACTTTGCCAATTAAC TGCAGAAGCTGATGGCCACAACATTTCGGAGATTTTCATGACATTGCCTTCAAGAAAACT CTATCCAGATTATTACCAGGTAATCAAACAGCCAACATCAATTAATCAAATTAAAAAGAA CTTGAAACAAGAAAATTTCGAGTCTTTCGAATCATTTATGGATAGCTTACAATTGATGTG TACAAATGCGAAAACATACAATGAAGAAGGTTCTTGGGTTTACGAAGACGCTACGACCGT TGAAAATTTCCTTTCGTCTAAAATTTGAATGTAATATAGTTTAAACTCTAATTTATTAAT ATTTCCCTAAAATTATAATTAAAAGTATTACCTATTTTGTAACTTTCACTTCATTACCAG ACCCTATTGTTGCAAGGGCCAATAATAGTGGCTCTTTTCTATATTAGCAATCTTGAGTAG CGCGAGTCGCATGCACGCTGGGTTGCAGGTTGCACTCTTATAAAAGAAACATACTAGAAG TATCGCAGTGAATGGTACTAGTTGTAATGAGTAATACAGGGTAGTTCTAGAGATCTATAG AAATTATGTATTGGTAACGTAAGGAAAA
>DEHA2F17732g.cds ATGAGTGAAGGGCCGATCGTAACTAACGGAAACGTTTTACATAACGGTAGCGGGATTGGT GGCGATATATCTGTGTCACGTCAGGCTATTTCTGTATCGTTTCCTGAGACCAGAGAGCAG CTAAACGCATTATTACATAAATATCAACAATTGATGAAAGCGTCAAATGAAGCGAAGGAA AAGCACGATAATTTTGTTAGATACCTTGAAAATAAGGAGAATGGTGTAAGCGATTTCAAG GGGACATCTAGTGATGTGAGGCCGGTGTTCAAGGACCCTACAGAAGAGGAAAGATTGGCA ATTGAGAATGTTTTTTACAAGATTAGTGAGCAATATCAAGAGTTTGTCAAGAACGAACAG ACGTTTTACGAATCTATAAAAGCACAGAAATCGGAAGAATCTTTGGATTTAGAATTGTTA GAGAAACAAATTGCCGGTTTGCAGTTCTTGTCAAAGGATTTGGATTTACCAGAATCGCTA CAAGAAGATTACGAATCCGTCATAAATTCCGAAAGTGAGTCTGTTCGTAATAAGGATACA GACAGATTCATTGAGGCATTTTTAAGGTCCAAATCGAATTTGAATGATTTCATGAAAAGG GCTGAATCTTTGGGAATTAAGGTTCCTCAACCTCTTGGCTCGATCAATCCAATGCATGCG CCTGTTGGTAATTATTATACAGAACAAATGATCTCCTCTAAGATATCAAATCGTATAAGG GAGCTTGAAAATTTGCCTGCAAACTTGGGTACTTTCAAAACTGATTCCTTAAAAAGTCAA ACTAACTACGATGATTTGAAAATTAAGGCCTTGATTGAATTAAAATCATTGCAACTTTTA GCAAAGCAAAAGCAATTAAAGAAAAACCTAATTATCAGCCAAGCAACGAACTCACATTAT GATAATTCCGATTTAAACAAAGTCCCACTAACATTGCAAGCAAGAAGATCTATATATATC AGGCCAAAAATTATTCAACCAAATCCACATTTGCTCGCTTCACAATTAGAAGAGAAACGT AAATTGGAAGCCAACAGAATAAAGCACGCATTACACGTTGAAAAAGTTCAACAAATTTTA ATCAACTCCGAAGATTTTGTAAATAAAAAGCTTAACCGCTTAAATAAAATTTCGACTATT TCTAGAGCTATCAATCTGTTCCATTCTGTTACCGAAAAGGATGAATCGAAGAAGTTGGAA AAAACTGCTAAACAGCGTTTGCAAGCTTTGAAAGCAAACGATGAAGAGGCATATATTAAA TTATTGGATCAAACAAAAGATCACAGAATTACGCATTTATTAAAGCAAACCAACACATTC TTGGACTCTTTGGCTCAAGCCGTTAAGGTTCAACAAGTCGAACAAGGAGCGGATGATATT TCAGGTGAGAAGCACATCGAGAATGAAGTCGTTCCTGAAAAAGAAGATAATGTAGAGGAA TTACGAGAAAAGATAGATTACTATCAAGTAGCCCATAGAGTCAAAGAAGAAGTAAAAGAA CAACCTTCTATTCTTGTAGGAGGTACCTTGAAAGAATATCAAGTAAAGGGTTTGGAATGG ATGGTATCTTTATACAATAATAAATTGAATGGTATTCTTGCAGATGAGATGGGTTTAGGT AAGACTATTCAATCTATATCTTTAATAACCTATTTAATTGAAAGGAAACATGAAGATAAG TTTTTGGTTGTCGTTCCATTGTCAACAATTACAAATTGGACAATGGAGTTTGAAAAATGG GCACCTGCTGTTGATGTTATTGTTTATAAGGGATCTCAACAACAACGTAAATCCATGCAA GCAGAAGTCAGATCTGGCGCATTTCAGGTTATTTTGACTACTTACGAATATATTATAAGA GAAAGGCCTTTGTTGTCTAAATTTTATTATTCTCACATGATTATTGATGAAGGTCACAGA ATGAAGAATGCAACTTCTAAATTATCTATTACTTTGAAGAACTATTATAAGACCAAAAAT AGATTGATTTTGACCGGTACACCATTACAGAATAATTTACCTGAATTATGGGCATTATTA AATTTCGTTTTGCCAAAAATTTTTAATTCCGTTAAATCTTTCGATGAATGGTTTAATACA CCATTTGCTAATACAGGTTCACAAGAAAAAATTGAATTAACTGAAGAAGAATCATTATTA GTTATTAGAAGATTGCATAAAGTTTTAAGACCGTTCTTGTTGAGAAGATTGAAGAAAGAT GTTGAAAAAGATTTACCTGACAAAGTTGAAAAAGTTCTTAAATGTAACTTATCTGGTTTG CAATACGTCTTATATCAACAAATGTTGAAACATAACGCATTATTTGTCGGTGTTGACGTT GGAGGAGCGAAGTCTGGTATTAAGGGTTTAAACAATAAGATTATGCAATTGAGGAAAATT TGTAATCATCCTTTCGTTTTCGAAGAAGTCGAAACCGTATTAAACTCGACCCGTTTAACT AATGATTTAATTTGGAGAGTTAGTGGTAAATTCGAATTACTCGACAGGGTTTTACCTAAA TTCAAAGCTTCGGGTCATAGAGTGTTGATTTTCTTCCAAATGACTCAGGTCATGAATATT ATGGAAGATTTCTTGAGATGGCGTGACATGAAATATTTAAGGCTTGATGGTGCTACAAAA GCGGAAGATAGGCAGGATATGTTGAAGGATTTCAATGCACCTAATTCGGATTATTTCTGT TTCCTTTTGTCCACTAGAGCTGGTGGGTTAGGTTTGAATTTACAAACAGCAGACACCGTT ATTATTTTTGATACTGATTGGAATCCACATCAAGATTTACAGGCTCAAGATAGAGCGCAT CGTATTGGTCAAAAGAATGAGGTTCGTATTTTGAGATTGATTACCAACGATTCTGTTGAA GAAGTCATTTTGGAAAGAGCACATCAAAAATTAGATATTGATGGTAAAGTTATTCAAGCA GGTAAGTTTGATAATAAATCGACTTCCGAAGAGCAAGAAGCTTTCTTAAAGAGATTATTA GAAGCAGAGGCAAGTAATGATGACAATGAAGAAAATGATTCATTAGATGATGAAGAGTTG AATGAAGTATTGGCACGTTCAGAGGATGAGAAGGTATTATTCGCACAAATTGATAACGAA AGAATTATCAATGAAAAACTCGCATCCAGACAAGGAGGTCCTAAAACAAGACTATTAGAA AAAGACGAGTTGCCTACTGTTTTCACGGAGGACGTATCACATCATTTCGAGAAAGACACT AAAGAATTAGCTCGTATGAGAGACAAGAAAAGGGTGAAGTATGATGATGGTTTAACTGAA GAACAATGGTTGATGGCTATGGACAATGACAATGATACAGTCGAAGATGCGATTAGGCGT AAAGAAGTCAGAGTTGCAAAAAGAAGAAAGAATAGAGGAGGGTCTGCTGATTTATTGAGT GATGATGATGAAGATATAGTGGATGGCGACCTAGACGAAGAGAACTTGAGACCAAGAAAA AGATCCCGTCGTTCAACTACTCCCCAAGCCAATGGCTACACAGATAATGAAGACGACATT TCGGAATTGGAAAAAGTTGATGACTCGAATGAGTTGGTCGAAAAATGTACTATCGTACTC GACGAACTTTGCCAATTAACTGCAGAAGCTGATGGCCACAACATTTCGGAGATTTTCATG ACATTGCCTTCAAGAAAACTCTATCCAGATTATTACCAGGTAATCAAACAGCCAACATCA ATTAATCAAATTAAAAAGAACTTGAAACAAGAAAATTTCGAGTCTTTCGAATCATTTATG GATAGCTTACAATTGATGTGTACAAATGCGAAAACATACAATGAAGAAGGTTCTTGGGTT TACGAAGACGCTACGACCGTTGAAAATTTCCTTTCGTCTAAAATTTGA
>DEHA2F17732g.aa MSEGPIVTNGNVLHNGSGIGGDISVSRQAISVSFPETREQLNALLHKYQQLMKASNEAKE KHDNFVRYLENKENGVSDFKGTSSDVRPVFKDPTEEERLAIENVFYKISEQYQEFVKNEQ TFYESIKAQKSEESLDLELLEKQIAGLQFLSKDLDLPESLQEDYESVINSESESVRNKDT DRFIEAFLRSKSNLNDFMKRAESLGIKVPQPLGSINPMHAPVGNYYTEQMISSKISNRIR ELENLPANLGTFKTDSLKSQTNYDDLKIKALIELKSLQLLAKQKQLKKNLIISQATNSHY DNSDLNKVPLTLQARRSIYIRPKIIQPNPHLLASQLEEKRKLEANRIKHALHVEKVQQIL INSEDFVNKKLNRLNKISTISRAINLFHSVTEKDESKKLEKTAKQRLQALKANDEEAYIK LLDQTKDHRITHLLKQTNTFLDSLAQAVKVQQVEQGADDISGEKHIENEVVPEKEDNVEE LREKIDYYQVAHRVKEEVKEQPSILVGGTLKEYQVKGLEWMVSLYNNKLNGILADEMGLG KTIQSISLITYLIERKHEDKFLVVVPLSTITNWTMEFEKWAPAVDVIVYKGSQQQRKSMQ AEVRSGAFQVILTTYEYIIRERPLLSKFYYSHMIIDEGHRMKNATSKLSITLKNYYKTKN RLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGSQEKIELTEEESLL VIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCNLSGLQYVLYQQMLKHNALFVGVDV GGAKSGIKGLNNKIMQLRKICNHPFVFEEVETVLNSTRLTNDLIWRVSGKFELLDRVLPK FKASGHRVLIFFQMTQVMNIMEDFLRWRDMKYLRLDGATKAEDRQDMLKDFNAPNSDYFC FLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITNDSVE EVILERAHQKLDIDGKVIQAGKFDNKSTSEEQEAFLKRLLEAEASNDDNEENDSLDDEEL NEVLARSEDEKVLFAQIDNERIINEKLASRQGGPKTRLLEKDELPTVFTEDVSHHFEKDT KELARMRDKKRVKYDDGLTEEQWLMAMDNDNDTVEDAIRRKEVRVAKRRKNRGGSADLLS DDDEDIVDGDLDEENLRPRKRSRRSTTPQANGYTDNEDDISELEKVDDSNELVEKCTIVL DELCQLTAEADGHNISEIFMTLPSRKLYPDYYQVIKQPTSINQIKKNLKQENFESFESFM DSLQLMCTNAKTYNEEGSWVYEDATTVENFLSSKI*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA0F19151g