HomeDEHA2E10934g
similar to uniprot|P40352 Saccharomyces cerevisiae YJR035W RAD26 Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesions
Element type: CDS
Element length: 3474 nucleotides,
on sense strand of
Deha2E: 857787..861260.
Other names:
DEHA-CDS0291.1
DEHA-IPF12007
DEHA0E11528g
Coding sequence: 1158 codons.
Element length: 3474 nucleotides,
on sense strand of
Deha2E: 857787..861260.
Other names:
DEHA-CDS0291.1
DEHA-IPF12007
DEHA0E11528g
Coding sequence: 1158 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0282 GL3C0282.N5Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2E10934p 
Protein domain map
Database cross references:
InterPro: IPR000330
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014021
UniProtKB/TrEMBL: Q6BPT7
InterPro: IPR000330
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014021
UniProtKB/TrEMBL: Q6BPT7
Gene Ontology terms
None available yet
Sequence data
>DEHA2E10934g.nt AAAATTGCAAACCAATGAGCCAGATATTATTGTATCTACTCCTGGTAGATTGGTAGACCA TTTGACTAACGGCTATATCAGTTTGAAGAATCTCCAGTATTTAGTTATTGATGAAGCCGA TCGTTTACTTAACCAATCTTTCCAAAACTGGTGTCAAATTTTGATTTCTAAAATAGACGA ATTCACAAATATTAAGGAAAGAAATATATCGAATAGTTGGAAGTTAAACGTACAAAAAAT GATATTCTCTGCCACATTGACTACTGATGCCGGGAAATTATCATTATTAAAATTCCATAA ACCAAGACTAATAATCGTTAATAATAAGGAACAATTGGTTAATGAGATGTTTAGCTTACC AGCCACATTGAATGAATTTAAATTACAATTCGGATCCGCAAAGTCTTCATTAAAACCATT AATATTATCCAAGTTTTTACTTTCAAAGAACAAACTTGCGAATGTCTTAATTTTTACGAA ATCAAATGACGCCTCGTTAAGGCTCTCTAGATTATTATCATTAATAATGAATAAATTGGG GTCCGAGACCATAAATATAGCATACATTAACTCAACTAATAACACCACGTCTGTGCGTTC CAAAATATTGAAAGATTTTTCTAAGCAGACTATTAATATTTTGGTTGCAACTGATTTGAT AGCTCGTGGGATCGATATACTATCGATCACAGATGTTATAAATTATGATTTACCTAATTC TTCTCGTGAATACGTTCATAGGGTTGGTCGTACTGCTAGAGCTAATCAAGAAGGATTTGC ATATAATTTCTGTTTCGGTAAAGGTGAAGCCAAGTGGTTCAAAAAGCTTATGGCTCAAGT AGGTAGAAGTGAAAAGAACATAGAAGAGCTTGAACTTGATACCAAGCAACTAATCGAAGA CAATGACGAATCTATGTATAAGGAATCGTTAGATGAATTACAACAACAAGTATTTAATAG AGCTTAAGTAGTATTATTAATAGAGCAGATAATTCACATAATGCGACAATTTTTTTGTAC ATCATCTCTTCTCGTATCTCTTTTACCATACTACATTACCTTACAAATAGCAATGGAAGA AGAAGAGAGCCCATTAGATCAATTAGGAGTAAAGTTCGTTGACCAAGATGAGTTAGAGCA TGATATAACTAAGAAGGCCAACGAGGCTTTGATTAATAAAGATACAGAATTAGATCAAAA GAGATTAGATAAAGCTAATAATGATTATAATAAAGCCCTGTCTAAGTTAAGAATATTAAG AAATAGATTATCCAATCCAAGGACTAAGATTTCACAACGTAAACCACTTAAAGATGAATG TGATTGGATCGAAAAGAATGAGCTAGAACCGTTAAAGCAAGATATAGTTGATATAACGAA CAGATTGAATGAAAATAAATCACAACTAAGCGAGTCTAAAAATCAATGTAATCAAAAGAA ATCAACTCAGTCTATCAATGAGAAATTACCTGGAGAATCTGAAAGGGATTTTCTTATACG AACAGGTAAAATAACTGCATTCGGGAATGAGAACGCATTTCACCAGGATAAGACAAATGA ACCAGATGATATCAAGAGCCATGTATTTTTAAGGGCCCCGGGATTTGAAGACGCAAACGT TACTACTCAGAATGATGATGATTATGACTATGGAGCAACGGAAAATGCTATGCCGTCTCT GTATAATGAAACGAATAAGAGGAAACAACTGGAAATGGAAGGTTCCGAAAACGAAAGTGA TTATTCCCCACTTGAGGAGAACCAAAATGCTCTGGAAGAAGAAGACATAGATAATGATAA TGTAGTCGATGATGATTACGATATTTATAGTGCTCCAAATGAAGTTGTAACAGAAACGAA GAATTTGGATGCGCAACGTAATGTGGATGATGGGGATGAATATTTATATCAAATACGGCT TAAGAATTGGATAAAAAGAAGGTCTGAGCTTAGAAAGAAGACAGAAGAAGTAACTAATGA AACGAACGATAAGGAGGAATGGTTTAAGCCACACCCTACAATACCTGATGCTGTGCTTAA TTCGAAATTTAAATTGCCAGGTGATATATATCCATCCTTATTTGATTATCAAAAGACCTG CGTTCAATGGCTTTGGGAACTATATTCCCAAAAAACTGGAGGAATTATAGGTGACGAAAT GGGATTAGGTAAAACAATTCAAATTATATCATTCCTAGCTGGATTACATTATTCTGGATT GTTGGAAAAACCAGTCTTGGTAGTGGTACCGGCAACTGTCATGAATCAATGGGTTAATGA ATTTCACAGATGGTGGCCACCATTGCGTTGTGTTATTTTACATAGTATCGGGTCAGGTAT GGGTAAAAATGCAATTCATTCAGAAGAAAAAATTGAAGCATTTTTAGAAACGACTGACCC TAGTTCAGTTAAAAATGATTCATTTAAGGGCATTAATAGTCATATGCGTGCAAAAGAAAT TATAGATACAGTAATGGAGAAAGGTCATGTTTTGGTAACAACATATGTTGGTTTAAGAAT ATATTCTAAATTTATTTTACCTCGACAATGGGGATATGTGGTCTTGGATGAGGGTCATAA GATAAGAAATCCTGATCTGGATATATCTCTAACGTGCAAGCAAATCAAAACGTATAATAG AATTATCTTATCTGGAACTCCGATTCAAAATAATCTTATTGAATTGTGGTCCTTATTTGA TTTCATATTTCCAGGGAGATTAGGAACTTTACCTGTGTTTGAACAGCAATTTTCTGTGCC TATCAATATGGGTGGATATGCGAATGCGTCGAATGTTCAAGTTCAAACCGGTTATAAGTG TGCTGTTATCCTTAGAGATTTAATATCCCCGTACCTCTTAAGGAGATTAAAGAGTGATGT AGCTCAGGATCTCCCTAAGAAAAATGAAATGGTTTTGTTTGTTAAATTGACTCAATATCA ACAAGATCTTTATGAAAAATTCCTTAGTAGTGAAGATTTGCACGCGATATTAAAGGGTAA AAGAAACATTTTAATGGGTGTTGATATTTTACGAAAGATTTGCAACCACCCAGATTTAGT TGACAGGGAAATATTACAGCGTAGGAAGAATTATAACTACGGCAACCCTGCAAAATCAGG AAAGTTACAAGTGCTTAAAAATTTGTTGCAATTATGGCAAATGCAAGGGCATAGAACCTT GTTGTTCTGCCAAACCAAACAGATGTTAGATATATTAGAAAAATTTGTCACAAACTTGCC ATCACTAAACGAAAATGGCGAAGAAGTACGTGGAACGTTTAATTATTTGAGAATGGATGG ATCAACTAATATCGGAAGAAGACAGGCATTAGTTGACACCTTTAATGAGGATAAGCAGTA CCATGTATTTCTATTGACAACCAAAGTTGGGGGATTGGGTATTAATTTAACTGGTGCTGA TAGAGTTATAATTTATGACCCTGACTGGAATCCATCAACAGATATTCAAGCGAGAGAAAG AGCATGGAGATTGGGACAAAAGAAAGATATAACAATTTATAGACTAATGACTGCTGGGTC GATCGAAGAAAAAATCTATCATAGACAAATATTCAAGACATTTTTAACCAACAAAATTTT AAAAGATCCTAAGCAAAGAAGATTTTTCAAAGTTAATGATTTACATGACTTGTTTTCATT GGGAGATCAAGATGAAGTAGGGACGGAAACTGGTGATTTATTCAATGGGTCTGAAACAAA ATTCAATGGCAAGAAAGACAGAAAGTCGAACAAGTTATTTAAGCCGAAGCATAAGAATGA TGATGACTTTTATCAGGTTGCAAACATAAATGGGGTTTCAAAACTCGACAACTTTGAGGG TGACAATCAGGAAAAGGATGGTGAACAAGATGGAAATAAGGATGAAAGTAGGATAATGGA GGGGTTGTTTGCTAATAGTGGTGTTCATAGTGCCTTGAAGCATGATGATATTATGGATTC GTCAAAGCAAGAGGTCTCGATTATCGAAAAAGAGGCGAACAGAGTTGCAGCAGAAGCGGC CGAGGCATTAAAAAGATCAAGAAAACTCACGAGAAAGAATAATATCGGTACTCCTACGTG GACAGGTAAGTTTGGATTGGCCGGTAAATTCGGTCCCAAAGTTAAACGAACGAAACTCTC GTCAAACGATAAACCTTCGAAATTATTATCGTCAACGTCGATTTTAAGTGAATTGAAGCA GAAGAAAAATAAATCTGATACTGTATTCGCTAAGAAATCAGCTAACGATGACAAAAAGTT TGATAGACAAGAAATGCTTGACAAGTTGATTGGCTTCCTTGCAAAACAGACGGATCATTT TAGTACCTCGAACAACATCTTGACCGATTTAAAGTTGGAATTAAACGACGAGAAGGACAT GATCTTGGTCCGGTCAATGTTAAGAGAGATCGCTACGTGGGATACTCCTCGTAAAGGATG GATTTTAAAACAAGAGTTTTTAACCAATAGTTAATGATAGTTTACGTATTATAAAAATAT ATTTTATCTTTGGTCGGGTACCGGCCCGAGTGATATCGAATCTCATTATCTTCGATGGTA GAAAACAAATTCTATCTAAATTAATAGGCTACGAAAGGTGAATGTATAAATAAGAAGCAG GTCAAAGAATGAATATTGCAAGGAGGTATCTTAGTAGGTTCGTGGAGAAATGTCCGATTG AACGAGGGTGTGAATGTAATATACTTAGTGAATTGCCCAACGACAAGCCGATTGATTTCG AAAAGAATTTGAATGGGACCAGTGTCATACCATG
>DEHA2E10934g.cds ATGCGACAATTTTTTTGTACATCATCTCTTCTCGTATCTCTTTTACCATACTACATTACC TTACAAATAGCAATGGAAGAAGAAGAGAGCCCATTAGATCAATTAGGAGTAAAGTTCGTT GACCAAGATGAGTTAGAGCATGATATAACTAAGAAGGCCAACGAGGCTTTGATTAATAAA GATACAGAATTAGATCAAAAGAGATTAGATAAAGCTAATAATGATTATAATAAAGCCCTG TCTAAGTTAAGAATATTAAGAAATAGATTATCCAATCCAAGGACTAAGATTTCACAACGT AAACCACTTAAAGATGAATGTGATTGGATCGAAAAGAATGAGCTAGAACCGTTAAAGCAA GATATAGTTGATATAACGAACAGATTGAATGAAAATAAATCACAACTAAGCGAGTCTAAA AATCAATGTAATCAAAAGAAATCAACTCAGTCTATCAATGAGAAATTACCTGGAGAATCT GAAAGGGATTTTCTTATACGAACAGGTAAAATAACTGCATTCGGGAATGAGAACGCATTT CACCAGGATAAGACAAATGAACCAGATGATATCAAGAGCCATGTATTTTTAAGGGCCCCG GGATTTGAAGACGCAAACGTTACTACTCAGAATGATGATGATTATGACTATGGAGCAACG GAAAATGCTATGCCGTCTCTGTATAATGAAACGAATAAGAGGAAACAACTGGAAATGGAA GGTTCCGAAAACGAAAGTGATTATTCCCCACTTGAGGAGAACCAAAATGCTCTGGAAGAA GAAGACATAGATAATGATAATGTAGTCGATGATGATTACGATATTTATAGTGCTCCAAAT GAAGTTGTAACAGAAACGAAGAATTTGGATGCGCAACGTAATGTGGATGATGGGGATGAA TATTTATATCAAATACGGCTTAAGAATTGGATAAAAAGAAGGTCTGAGCTTAGAAAGAAG ACAGAAGAAGTAACTAATGAAACGAACGATAAGGAGGAATGGTTTAAGCCACACCCTACA ATACCTGATGCTGTGCTTAATTCGAAATTTAAATTGCCAGGTGATATATATCCATCCTTA TTTGATTATCAAAAGACCTGCGTTCAATGGCTTTGGGAACTATATTCCCAAAAAACTGGA GGAATTATAGGTGACGAAATGGGATTAGGTAAAACAATTCAAATTATATCATTCCTAGCT GGATTACATTATTCTGGATTGTTGGAAAAACCAGTCTTGGTAGTGGTACCGGCAACTGTC ATGAATCAATGGGTTAATGAATTTCACAGATGGTGGCCACCATTGCGTTGTGTTATTTTA CATAGTATCGGGTCAGGTATGGGTAAAAATGCAATTCATTCAGAAGAAAAAATTGAAGCA TTTTTAGAAACGACTGACCCTAGTTCAGTTAAAAATGATTCATTTAAGGGCATTAATAGT CATATGCGTGCAAAAGAAATTATAGATACAGTAATGGAGAAAGGTCATGTTTTGGTAACA ACATATGTTGGTTTAAGAATATATTCTAAATTTATTTTACCTCGACAATGGGGATATGTG GTCTTGGATGAGGGTCATAAGATAAGAAATCCTGATCTGGATATATCTCTAACGTGCAAG CAAATCAAAACGTATAATAGAATTATCTTATCTGGAACTCCGATTCAAAATAATCTTATT GAATTGTGGTCCTTATTTGATTTCATATTTCCAGGGAGATTAGGAACTTTACCTGTGTTT GAACAGCAATTTTCTGTGCCTATCAATATGGGTGGATATGCGAATGCGTCGAATGTTCAA GTTCAAACCGGTTATAAGTGTGCTGTTATCCTTAGAGATTTAATATCCCCGTACCTCTTA AGGAGATTAAAGAGTGATGTAGCTCAGGATCTCCCTAAGAAAAATGAAATGGTTTTGTTT GTTAAATTGACTCAATATCAACAAGATCTTTATGAAAAATTCCTTAGTAGTGAAGATTTG CACGCGATATTAAAGGGTAAAAGAAACATTTTAATGGGTGTTGATATTTTACGAAAGATT TGCAACCACCCAGATTTAGTTGACAGGGAAATATTACAGCGTAGGAAGAATTATAACTAC GGCAACCCTGCAAAATCAGGAAAGTTACAAGTGCTTAAAAATTTGTTGCAATTATGGCAA ATGCAAGGGCATAGAACCTTGTTGTTCTGCCAAACCAAACAGATGTTAGATATATTAGAA AAATTTGTCACAAACTTGCCATCACTAAACGAAAATGGCGAAGAAGTACGTGGAACGTTT AATTATTTGAGAATGGATGGATCAACTAATATCGGAAGAAGACAGGCATTAGTTGACACC TTTAATGAGGATAAGCAGTACCATGTATTTCTATTGACAACCAAAGTTGGGGGATTGGGT ATTAATTTAACTGGTGCTGATAGAGTTATAATTTATGACCCTGACTGGAATCCATCAACA GATATTCAAGCGAGAGAAAGAGCATGGAGATTGGGACAAAAGAAAGATATAACAATTTAT AGACTAATGACTGCTGGGTCGATCGAAGAAAAAATCTATCATAGACAAATATTCAAGACA TTTTTAACCAACAAAATTTTAAAAGATCCTAAGCAAAGAAGATTTTTCAAAGTTAATGAT TTACATGACTTGTTTTCATTGGGAGATCAAGATGAAGTAGGGACGGAAACTGGTGATTTA TTCAATGGGTCTGAAACAAAATTCAATGGCAAGAAAGACAGAAAGTCGAACAAGTTATTT AAGCCGAAGCATAAGAATGATGATGACTTTTATCAGGTTGCAAACATAAATGGGGTTTCA AAACTCGACAACTTTGAGGGTGACAATCAGGAAAAGGATGGTGAACAAGATGGAAATAAG GATGAAAGTAGGATAATGGAGGGGTTGTTTGCTAATAGTGGTGTTCATAGTGCCTTGAAG CATGATGATATTATGGATTCGTCAAAGCAAGAGGTCTCGATTATCGAAAAAGAGGCGAAC AGAGTTGCAGCAGAAGCGGCCGAGGCATTAAAAAGATCAAGAAAACTCACGAGAAAGAAT AATATCGGTACTCCTACGTGGACAGGTAAGTTTGGATTGGCCGGTAAATTCGGTCCCAAA GTTAAACGAACGAAACTCTCGTCAAACGATAAACCTTCGAAATTATTATCGTCAACGTCG ATTTTAAGTGAATTGAAGCAGAAGAAAAATAAATCTGATACTGTATTCGCTAAGAAATCA GCTAACGATGACAAAAAGTTTGATAGACAAGAAATGCTTGACAAGTTGATTGGCTTCCTT GCAAAACAGACGGATCATTTTAGTACCTCGAACAACATCTTGACCGATTTAAAGTTGGAA TTAAACGACGAGAAGGACATGATCTTGGTCCGGTCAATGTTAAGAGAGATCGCTACGTGG GATACTCCTCGTAAAGGATGGATTTTAAAACAAGAGTTTTTAACCAATAGTTAA
>DEHA2E10934g.aa MRQFFCTSSLLVSLLPYYITLQIAMEEEESPLDQLGVKFVDQDELEHDITKKANEALINK DTELDQKRLDKANNDYNKALSKLRILRNRLSNPRTKISQRKPLKDECDWIEKNELEPLKQ DIVDITNRLNENKSQLSESKNQCNQKKSTQSINEKLPGESERDFLIRTGKITAFGNENAF HQDKTNEPDDIKSHVFLRAPGFEDANVTTQNDDDYDYGATENAMPSLYNETNKRKQLEME GSENESDYSPLEENQNALEEEDIDNDNVVDDDYDIYSAPNEVVTETKNLDAQRNVDDGDE YLYQIRLKNWIKRRSELRKKTEEVTNETNDKEEWFKPHPTIPDAVLNSKFKLPGDIYPSL FDYQKTCVQWLWELYSQKTGGIIGDEMGLGKTIQIISFLAGLHYSGLLEKPVLVVVPATV MNQWVNEFHRWWPPLRCVILHSIGSGMGKNAIHSEEKIEAFLETTDPSSVKNDSFKGINS HMRAKEIIDTVMEKGHVLVTTYVGLRIYSKFILPRQWGYVVLDEGHKIRNPDLDISLTCK QIKTYNRIILSGTPIQNNLIELWSLFDFIFPGRLGTLPVFEQQFSVPINMGGYANASNVQ VQTGYKCAVILRDLISPYLLRRLKSDVAQDLPKKNEMVLFVKLTQYQQDLYEKFLSSEDL HAILKGKRNILMGVDILRKICNHPDLVDREILQRRKNYNYGNPAKSGKLQVLKNLLQLWQ MQGHRTLLFCQTKQMLDILEKFVTNLPSLNENGEEVRGTFNYLRMDGSTNIGRRQALVDT FNEDKQYHVFLLTTKVGGLGINLTGADRVIIYDPDWNPSTDIQARERAWRLGQKKDITIY RLMTAGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFKVNDLHDLFSLGDQDEVGTETGDL FNGSETKFNGKKDRKSNKLFKPKHKNDDDFYQVANINGVSKLDNFEGDNQEKDGEQDGNK DESRIMEGLFANSGVHSALKHDDIMDSSKQEVSIIEKEANRVAAEAAEALKRSRKLTRKN NIGTPTWTGKFGLAGKFGPKVKRTKLSSNDKPSKLLSSTSILSELKQKKNKSDTVFAKKS ANDDKKFDRQEMLDKLIGFLAKQTDHFSTSNNILTDLKLELNDEKDMILVRSMLREIATW DTPRKGWILKQEFLTNS*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA0E11528g