HomeDEHA2D06468g
weakly similar to uniprot|P53178 Saccharomyces cerevisiae YGL047W ALG13 Catalytic component of UDP-GlcNAc transferase, required for the second step of dolichyl-linked oligosaccharide synthesis
Element type: CDS
Element length: 639 nucleotides,
on anti-sense strand of
Deha2D: complement(526837..527475).
Other names:
DEHA-CDS5228.1
DEHA-IPF1593
DEHA0D07128g
Coding sequence: 213 codons.
Element length: 639 nucleotides,
on anti-sense strand of
Deha2D: complement(526837..527475).
Other names:
DEHA-CDS5228.1
DEHA-IPF1593
DEHA0D07128g
Coding sequence: 213 codons.
Homologs and Orthologs
Homologs in protein families: GL3R1263 GL3R1263.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2D06468p 
weakly similar to uniprot|P53178 Saccharomyces cerevisiae YGL047W ALG13 Essential protein required for the second step of dolichyl-linked oligosaccharide synthesis
Protein domain map
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>DEHA2D06468g.nt CCATATTCGTTACTTTTGGGTGGTGAAAAAAGCTGCGACTGCCCCGGAGACAACGAATTT ATACCGTTGGATAAAGCCAACGATCCGTCCAGGTTCAAAGAAGCTGGAAGCGGTGCATTT GCATCCGTATTGTTGGTCAACACAATAACGTGTTCGTTGATGTCCATGTCCTTCGATGAA CCCCGGCGCATGATATTAGGCAAACTGCCATGCAATTTCTGTTGATGTCTCAACACCAAG TCTCTTCTGGCAAAACACCGTCCACAAACAGCACATTGGAACGGTTTCTCGTTCGTATGT GACCTCTCGTGTCGTTTCAAGTGTTCCAATCTCGCAAACGCCCTCGTACATATTGAACAA ATATGCGGTCTCGGTTTATCAGTTTTAATCTGCTGTGACTTCTTCGGTATCGGCTGAGTA GCCCCTGATGCTAAACCGCTAGCTGATTGTGGAGTGGATGCCGATGAATTGGGCGACTTA TTACTAGAAGTTGAACTTCTCTGCGTATCCATTATACGTCTAGTTTATCCTTAAACTATC AACCAACTTATTTTTATACTCAATATTACTATACCTGTCTAGCAAATCTATCCAGTATAT ACGTAATAAGTCTTATATCTATCTTGTCTATTCAAACCGTTAGCAATACAATTTTTGCAA AATATTAATGAAGACTTTCCATCGGACATAATAATACCAACTTTTTGGGCTCCGACATTT TCCTACACAAAAAAGAAAAAAAAAAGAAACTGATAAACACGACATTTGATAATCATTACT TCTAGTCAGAAACCACCAACCTAGATCTGGTATCTGTTGGTTAAAACGCTACGGTAAACA TATTGGTGTTAGAGGTTATTTTGATATTTTGTTGGTCATTTTTACGGTAATTTTTACGGT AATTTTGTCTCATTAGATCGTTGACTTTGCAATTGGTGTACGTGCAATCTGAATAAGCGG TAATACTTCCGATTAGGCGAAAGTTGTATCATTCTTGGAAATGACAAGCGTATTGTTTAC AAGCGGTGCCACCGTGACTTTCAGGGAATTAATTGAGGTGATTACAAGCTATGATTTTAT AGTGGAGACTATCATTGGAAATGGGATTACCAGAATGATAGTCCAGTACGGCAATGAAAT CGAAACCGGCACGCAGAAACATGTCAGTGAAGAATTTTATAGGCAATGCGTAGAAGATAA GGAATTGAAGCAGCTGCTTCAATTGGAGGTGGTGCTGGGGTCCCAAAACGATAGCAATGT GGTTACTTATCGCTCGAATAAGTATCGTGGGTTTGAGATGGTGGTTTTCCCATTTTCGAA CGATATTGGCCTGTTCATATCCGAATCCGACGTGGTCATTTCCCATGCAGGCACTGGCTC AATTATAGATACATTACGATTGGAAAAGCCTCTTATCGTGGTCACCAATGATAAGTTGAT GAACAAGCATCAGGAGGAAGTGGCCGATGAATTGGTGAAGTTGGGATGCTGTAGGAAAAT GACGATAGAAGATATGAAGCTGAGTCAATTGAAGGACTGCATCTCTGAAATTTTGTCCGG GCCGGAAACCTTCAATAAACTACCGGAATGTAGTACCACCGAAGTCGAAGGTATCATATA CCATGAGCTAGTAAAGTAATTAAGTAGAATCTTTTTATGGGCTGGTATCTCCGGTGTGTC TCAGATCCATAGAATGGTAGCATTTGCATTTTTTCTGTATAACTAGCTCTAGTATGTATA TAATCTGGAATGCAACATATAGTATATTGATGTATTTTTGGTAGTGTATTTACCAATATG GCTAGAGGGTATTTCTTCTTTACGAGTAGTCTAAACCTGTTAGATGTGGTGCTTCTTTGC AAGAATGTCGTTCAATACACAGCCACCTATAACTAATACAAAGAGGAGAAGGAAGCAACG TCTTTTCACTAGAGATATT
Coding sequence
>DEHA2D06468g.cds ATGACAAGCGTATTGTTTACAAGCGGTGCCACCGTGACTTTCAGGGAATTAATTGAGGTG ATTACAAGCTATGATTTTATAGTGGAGACTATCATTGGAAATGGGATTACCAGAATGATA GTCCAGTACGGCAATGAAATCGAAACCGGCACGCAGAAACATGTCAGTGAAGAATTTTAT AGGCAATGCGTAGAAGATAAGGAATTGAAGCAGCTGCTTCAATTGGAGGTGGTGCTGGGG TCCCAAAACGATAGCAATGTGGTTACTTATCGCTCGAATAAGTATCGTGGGTTTGAGATG GTGGTTTTCCCATTTTCGAACGATATTGGCCTGTTCATATCCGAATCCGACGTGGTCATT TCCCATGCAGGCACTGGCTCAATTATAGATACATTACGATTGGAAAAGCCTCTTATCGTG GTCACCAATGATAAGTTGATGAACAAGCATCAGGAGGAAGTGGCCGATGAATTGGTGAAG TTGGGATGCTGTAGGAAAATGACGATAGAAGATATGAAGCTGAGTCAATTGAAGGACTGC ATCTCTGAAATTTTGTCCGGGCCGGAAACCTTCAATAAACTACCGGAATGTAGTACCACC GAAGTCGAAGGTATCATATACCATGAGCTAGTAAAGTAA
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA0D07128g