HomeDEHA2B05478g
similar to uniprot|P09950 Saccharomyces cerevisiae YDR232w HEM1 5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway
Element type: CDS
Element length: 1728 nucleotides,
on sense strand of
Deha2B: 441580..443307.
Other names:
DEHA-CDS1779.1
DEHA-IPF9580
DEHA0B05357g
Coding sequence: 576 codons.
Element length: 1728 nucleotides,
on sense strand of
Deha2B: 441580..443307.
Other names:
DEHA-CDS1779.1
DEHA-IPF9580
DEHA0B05357g
Coding sequence: 576 codons.
Homologs and Orthologs
Homologs in protein families: GL3C0100 GL3C0100.N3Orthologs: strict determination not possible; homologs must be refined manually
Protein DEHA2B05478p 
similar to uniprot|P09950 Saccharomyces cerevisiae YDR232w HEM1 5-aminolevulinate synthase
Protein domain map
Database cross references:
InterPro: IPR001917
InterPro: IPR004839
InterPro: IPR010961
InterPro: IPR015421
UniProtKB/Swiss-Prot: Q6BX71
InterPro: IPR001917
InterPro: IPR004839
InterPro: IPR010961
InterPro: IPR015421
UniProtKB/Swiss-Prot: Q6BX71
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>DEHA2B05478g.nt TGGTATAGGGCAAAATGAATACGGCGATTACAATATAGTGCTACTATACAATGCATTAAA CCCAATCAGTTTGTACTTAAGGTAGAGGTGGATCGACATTCGAAATTGAATATTGCAAAG TCATATATAATGACAAGGGGTATGAAGATAAAGGCGGAAGTGTCAATCATGATATTATAC CATTAAGGTTTGTCTGTTAGTGGCAGTTGTACTGTAGTATTTGAGTATTTGAATCGTTCG GTTAGACTAAATAAATTTACATTAAAACAAAATAAAACGAGTATAAATAAAGTAATAAGG AATGAGAACAGAAGAATATTTGTACCAAACCGGTACTTGTATATCGAGTTTGTTTTCAGG ACATATAATGAAACGTTTAGAAGATCTACGGATGTTCTATTGCGCCTATGAATTTTCTTC GGTCTTAACCCTCAGTTCCCGACTTCGTGGCCAAGTTGGCTAAGGCGTGAGACTGTTAAT CTCAAGATCGTGAGTTCGACCCTCACCGAGGTCGTTTACATTTTTACTCCATTTTTTTTT TTTAAAATCGAGAAACATGACAGAATGATTATTTGAGAGTTCGATGATTCGCTGCATAAA TACTTCATAACTTCATAACTTATCATTAATTTACTAAGCAGTATTTACTCTATAATTGGA CGCTTGTGATTAGGATTATTGCTACGTGATGACGTGACAGATGCGCTTAATATTACTCCA TGCTAAGTCATTCTTGTAGACCTCTCATAAGACAAAAACCATCATGCGAGCGTTACATAA CCTTCCGCGGGATTGAAAAAAAATTGCTCAACCACAAGATTTCTTTGTCTTGAAAAATAA GTCTATTGATAATTTCTTCTTCCACATATAACCCACTAAACATCTTGAAAGTTACTTAAA GAAGCAACAAGCTAGGTATTACGGTGAAATATACTGGATCTACAAAAAACATTAAAAAAA GTATATTTTTGAAGTAAAAAAAAAGTCATCTGAATTAGCCATGGAATCAATTACTCGAGT CTCCATGTCCGTTTGTCCATTCGTGAAATCGTCATCGGCCCAAGCGTTACGTCAATTGAG TAAAAACTCAGCTTTGACTAGTCAAGCACGCCAATGTCCATTTATGGGTGCGGCCTTGAA TGCTAAGGAATCGACTAGATCGTACTCGTCAGCCACTAAACCTGTCAGAGCTACAGCTTC TTCTCTTGCTTCGAATCCACCTTCGACTATGCAATCAAAGTACTCTTTCAAGGCAGAGGA ACTCGTTGGAAACAAGGATGCGATTAATCTTGAGTCAAAAGAGAATACTTTTGACTTCAA AGGTTACTTAAACTCCGAATTGAGCAAGAAGAGAACTGACAAGTCGTATCGTTTCTTCAA CAACATTAACCGTTTAGCTAATGAATTCCCTAAGGCTCATCGTTCTGAAGAGAATGACAA GGTTACTGTTTGGTGCTCTAATGATTATCTTGGTATGGGTAAAAATGAGAATACGATAAA CGAAATGAAGCGAGTCTTGACCAAGTATGGTTCAGGTGCCGGTGGTACCAGAAACATTGC TGGACACAACATCCATGCTCTTAAGTTAGAATCGGAGTTAGCTGCTTTGCACAAACATGA AGCTGCATTAGTTTTTTCGTCTTGTTTTGTTGCTAACGATGCAGTTTTATCGTTATTTGG CCAAAAGATCAAAGACTTAGTCATCTTTTCTGATGAATTAAATCATGCCTCTATGATCCA GGGTATTAGAAATTCAAGAGCTAAAAAGCAAGTCTTTAAGCATAATGATTTGGCTGATTT GGAAGAAAAATTAGCTCAATATCCAAAATCAACCCCAAAATTGATTGCATTTGAGTCTGT CTACTCTATGTGTGGTTCTATCGCCCCTATCGAAGCTATTTGTGACTTAGCAGAAAAATA CGGAGCATTGACTTTCCTTGATGAAGTCCACGCAGTAGGTATGTATGGTCCTCATGGTGC TGGTGTTGCTGAACACTTAGATTTCGACGCCCATTTGAAATCGGGTATTGCTTCGCCACA AACCCAAACAGTTATGAATAGAGTAGATATGGTTACAGGTACTTTAGGTAAGGCCTACGG TACTGTAGGTGGTTACATCACCGGTAAGGCTAACTTGATTGATTGGTTTAGGTCTTTTGC TCCAGGTTTTATCTTCACTACCACTTTACCTCCATCAATTATGGCTGGATCAAGTGCTTC CATTCGTTACCAAAGATCAACCTTGCAAGACCGAATCGCTCAACAAACTAATACCAGATA CGTCAAGAACAATTTAACCGATATTGGTATTCCTGTTATTCCAAACCCATCGCATATTGT GCCAGTTTTAGTTGGTAATGCGCTCGACGCTAAAAAGGCCTCTGATTTGTTATTAGATAA GTACAACATTTACGTTCAAGCCATCAATTTCCCAACTGTACCAATCGGTCAAGAAAGATT GAGAATCACCCCAACTCCAGGCCACGGACCCGAACTTTCAAACCAATTGATTGGTGCCCT TGATTCGGTTTTCAATGAATTGAGTTTGTCAAGAATCGGCGATTGGGAAGGTAAAGGAGG TTTGTGTGGTGTTGGTGAACCTGATATCGAACCAATAGAACACATTTGGACTTCCGAACA ATTAGCTTTGACTGATGCTGATATAAACCCTAACGTGATCGACCCTGTTATTCAACCTAT TGGAGTCAGTTCTGGTGTTAGGGATTAAAAGTAATATACTACATAATTTTTTTCACATTA TTGTGTTTTTTTTTTACGTTAGCTATGCCATCTTTTAATAAAACTTTCATCTATTTACTG AAAACACTCTCTGTTTATCTTGTAGTTCAGTCTAATACTATCAGGTTGAAGCATATATAC TATAATAGTTGAGTAACACAAAATCGTAGGATCAAAACATCAACGCGCTTGCAAAAGAAA ACAATCACAATATACATTACGTTATAATCTAAAAGGATAGCCATTATGACACTAGATAAG GACCAACTAATAAAGGTTTATACTAGTA
Coding sequence
>DEHA2B05478g.cds ATGGAATCAATTACTCGAGTCTCCATGTCCGTTTGTCCATTCGTGAAATCGTCATCGGCC CAAGCGTTACGTCAATTGAGTAAAAACTCAGCTTTGACTAGTCAAGCACGCCAATGTCCA TTTATGGGTGCGGCCTTGAATGCTAAGGAATCGACTAGATCGTACTCGTCAGCCACTAAA CCTGTCAGAGCTACAGCTTCTTCTCTTGCTTCGAATCCACCTTCGACTATGCAATCAAAG TACTCTTTCAAGGCAGAGGAACTCGTTGGAAACAAGGATGCGATTAATCTTGAGTCAAAA GAGAATACTTTTGACTTCAAAGGTTACTTAAACTCCGAATTGAGCAAGAAGAGAACTGAC AAGTCGTATCGTTTCTTCAACAACATTAACCGTTTAGCTAATGAATTCCCTAAGGCTCAT CGTTCTGAAGAGAATGACAAGGTTACTGTTTGGTGCTCTAATGATTATCTTGGTATGGGT AAAAATGAGAATACGATAAACGAAATGAAGCGAGTCTTGACCAAGTATGGTTCAGGTGCC GGTGGTACCAGAAACATTGCTGGACACAACATCCATGCTCTTAAGTTAGAATCGGAGTTA GCTGCTTTGCACAAACATGAAGCTGCATTAGTTTTTTCGTCTTGTTTTGTTGCTAACGAT GCAGTTTTATCGTTATTTGGCCAAAAGATCAAAGACTTAGTCATCTTTTCTGATGAATTA AATCATGCCTCTATGATCCAGGGTATTAGAAATTCAAGAGCTAAAAAGCAAGTCTTTAAG CATAATGATTTGGCTGATTTGGAAGAAAAATTAGCTCAATATCCAAAATCAACCCCAAAA TTGATTGCATTTGAGTCTGTCTACTCTATGTGTGGTTCTATCGCCCCTATCGAAGCTATT TGTGACTTAGCAGAAAAATACGGAGCATTGACTTTCCTTGATGAAGTCCACGCAGTAGGT ATGTATGGTCCTCATGGTGCTGGTGTTGCTGAACACTTAGATTTCGACGCCCATTTGAAA TCGGGTATTGCTTCGCCACAAACCCAAACAGTTATGAATAGAGTAGATATGGTTACAGGT ACTTTAGGTAAGGCCTACGGTACTGTAGGTGGTTACATCACCGGTAAGGCTAACTTGATT GATTGGTTTAGGTCTTTTGCTCCAGGTTTTATCTTCACTACCACTTTACCTCCATCAATT ATGGCTGGATCAAGTGCTTCCATTCGTTACCAAAGATCAACCTTGCAAGACCGAATCGCT CAACAAACTAATACCAGATACGTCAAGAACAATTTAACCGATATTGGTATTCCTGTTATT CCAAACCCATCGCATATTGTGCCAGTTTTAGTTGGTAATGCGCTCGACGCTAAAAAGGCC TCTGATTTGTTATTAGATAAGTACAACATTTACGTTCAAGCCATCAATTTCCCAACTGTA CCAATCGGTCAAGAAAGATTGAGAATCACCCCAACTCCAGGCCACGGACCCGAACTTTCA AACCAATTGATTGGTGCCCTTGATTCGGTTTTCAATGAATTGAGTTTGTCAAGAATCGGC GATTGGGAAGGTAAAGGAGGTTTGTGTGGTGTTGGTGAACCTGATATCGAACCAATAGAA CACATTTGGACTTCCGAACAATTAGCTTTGACTGATGCTGATATAAACCCTAACGTGATC GACCCTGTTATTCAACCTATTGGAGTCAGTTCTGGTGTTAGGGATTAA
Predicted translation product
>DEHA2B05478g.aa MESITRVSMSVCPFVKSSSAQALRQLSKNSALTSQARQCPFMGAALNAKESTRSYSSATK PVRATASSLASNPPSTMQSKYSFKAEELVGNKDAINLESKENTFDFKGYLNSELSKKRTD KSYRFFNNINRLANEFPKAHRSEENDKVTVWCSNDYLGMGKNENTINEMKRVLTKYGSGA GGTRNIAGHNIHALKLESELAALHKHEAALVFSSCFVANDAVLSLFGQKIKDLVIFSDEL NHASMIQGIRNSRAKKQVFKHNDLADLEEKLAQYPKSTPKLIAFESVYSMCGSIAPIEAI CDLAEKYGALTFLDEVHAVGMYGPHGAGVAEHLDFDAHLKSGIASPQTQTVMNRVDMVTG TLGKAYGTVGGYITGKANLIDWFRSFAPGFIFTTTLPPSIMAGSSASIRYQRSTLQDRIA QQTNTRYVKNNLTDIGIPVIPNPSHIVPVLVGNALDAKKASDLLLDKYNIYVQAINFPTV PIGQERLRITPTPGHGPELSNQLIGALDSVFNELSLSRIGDWEGKGGLCGVGEPDIEPIE HIWTSEQLALTDADINPNVIDPVIQPIGVSSGVRD*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/DEHA/DEHA0B05357g