HomeCAGL0M07832g
some similarities with uniprot|P21651 Saccharomyces cerevisiae YJR021c meiotic recombination protein
Element type: CDS
Element length: 1220 nucleotides,
on anti-sense strand of
Cagl0M: complement(join(783505..784319,784445..784724)).
Other names:
CAGL-CDS5600.1
CAGL-IPF9237
Coding sequence: 365 codons.
Element length: 1220 nucleotides,
on anti-sense strand of
Cagl0M: complement(join(783505..784319,784445..784724)).
Other names:
CAGL-CDS5600.1
CAGL-IPF9237
Coding sequence: 365 codons.
Database cross references:
EMBL: CR380959
GeneID: 2891738
GenomeReviews: CR380959_GR
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR380959
GeneID: 2891738
GenomeReviews: CR380959_GR
Homologs and Orthologs
Homologs in protein family: GL3C4070Orthologs: strict determination not possible; homologs must be refined manually
Protein CAGL0M07832p 
some similarities with uniprot|P21651 Saccharomyces cerevisiae YJR021c meiotic recombination protein; SubName: Full=Strain CBS138 chromosome M complete sequence;
Protein domain map
Database cross references:
InterPro: IPR015159
KEGG: cgr:CAGL0M07832g
Pfam: PF09074
RefSeq: XP_449687.1
UniProtKB/TrEMBL: Q6FJA7
UniProtKB: Q6FJA7_CANGA
Phylogeny
PhylomeDB:CAGL0M07832g
InterPro: IPR015159
KEGG: cgr:CAGL0M07832g
Pfam: PF09074
RefSeq: XP_449687.1
UniProtKB/TrEMBL: Q6FJA7
UniProtKB: Q6FJA7_CANGA
Phylogeny
PhylomeDB:CAGL0M07832gGene Ontology terms
Sequence data
>CAGL0M07832g.nt ATGGAGCAGCGGTTAGAGACCGAAGATTTGCACTCTGAAAGTACTGATATATCCTCCTCA ATAGATGCAGATGATTTGTTACATAGTGGAGACTCTTCTCTTGGTGAAGCAGACAAACAG ATTATGGAATGGGCTGGGAAACTTGAGTTAGAAAGTATAGATCTCAGGGAAAAGTCGGAG AAATTAATAAATACATTGACAAATATGTCTCAAGAGCTAATGAAAGTGAGCTCGCAATTA GTGAAACAATTAGAGAATTGTAACCACAGCAAAGAAGAAGGTATGTACCGATTATAAAAA AAAAACACATTTTGCCATAATGACCTATTTTTTTTACTGGTTGTTTTTAGTTGAAACTTA TTAAAATGTAAGCCGTGATTTTACTAACAGCTTAAATTCATATAGATATTGTCGACCAAG TCTATAAGCTTGATGTTAATATAAACAATCAATTACAAGATTGGAAAAAAAGCTTTAGTG ATCAGTTGAAAAGTATAAATCATAACAGTAATTTAGGTCAAATTAAAAACTTAACAGAGT GTATGGCCAACCAAGAAGCCAACATTCTTGGCGCAATTAGACACAACAGTACTATTTTGA AAGATGAATGCAGAGATATAATAAAATCACAAGAATTAGCTGGCGCCCCAAAATTGCAGA GAGCAGTGGATTACCTACATGAGATTATGCACAATATGTCATGCCAAACTGAATCTATGA ATGAACTGTTACTTTCAATTGACAAGCAGTTACATAATATTGATCTAGCTCTCATTAAAG AAAAAGATCAATACAAAGTACAATTTAAAGCTTTTAAAAGGAGCTTAAGAGATATGATTA CATCTAATCGTAATAATGTTGAAGACACTGTAGTAAATACAGTGCAAGTAACTATTGAAA GAAAATTGGAGGATATGTTTGATAAGATGTTCGATCAGAAATTATTGGGTAAGTTAAGAC TTTTAATTACCAAGGGAGAGATACCAGTACCGGAGGGAAGTAAATTAGCGAATGCCATTC CACTTAATAGACATACTAATGACTATGATTTGAATGGAACAACTTGGACAGATTCCTCTT CCCAAGACGGACCTAGAACTCGAGCTAGATTCAGAACCAAAAACAAAGTTACAAAGCCGC GGAAGTCAGAAATTTCTAGGACTATAATACCATGGTGTGAGATTTCTTCTCCACCGGTCG AATATACATCAGACTTGTGA3">
>CAGL0M07832g.cds ATGGAGCAGCGGTTAGAGACCGAAGATTTGCACTCTGAAAGTACTGATATATCCTCCTCA ATAGATGCAGATGATTTGTTACATAGTGGAGACTCTTCTCTTGGTGAAGCAGACAAACAG ATTATGGAATGGGCTGGGAAACTTGAGTTAGAAAGTATAGATCTCAGGGAAAAGTCGGAG AAATTAATAAATACATTGACAAATATGTCTCAAGAGCTAATGAAAGTGAGCTCGCAATTA GTGAAACAATTAGAGAATTGTAACCACAGCAAAGAAGAAGATATTGTCGACCAAGTCTAT AAGCTTGATGTTAATATAAACAATCAATTACAAGATTGGAAAAAAAGCTTTAGTGATCAG TTGAAAAGTATAAATCATAACAGTAATTTAGGTCAAATTAAAAACTTAACAGAGTGTATG GCCAACCAAGAAGCCAACATTCTTGGCGCAATTAGACACAACAGTACTATTTTGAAAGAT GAATGCAGAGATATAATAAAATCACAAGAATTAGCTGGCGCCCCAAAATTGCAGAGAGCA GTGGATTACCTACATGAGATTATGCACAATATGTCATGCCAAACTGAATCTATGAATGAA CTGTTACTTTCAATTGACAAGCAGTTACATAATATTGATCTAGCTCTCATTAAAGAAAAA GATCAATACAAAGTACAATTTAAAGCTTTTAAAAGGAGCTTAAGAGATATGATTACATCT AATCGTAATAATGTTGAAGACACTGTAGTAAATACAGTGCAAGTAACTATTGAAAGAAAA TTGGAGGATATGTTTGATAAGATGTTCGATCAGAAATTATTGGGTAAGTTAAGACTTTTA ATTACCAAGGGAGAGATACCAGTACCGGAGGGAAGTAAATTAGCGAATGCCATTCCACTT AATAGACATACTAATGACTATGATTTGAATGGAACAACTTGGACAGATTCCTCTTCCCAA GACGGACCTAGAACTCGAGCTAGATTCAGAACCAAAAACAAAGTTACAAAGCCGCGGAAG TCAGAAATTTCTAGGACTATAATACCATGGTGTGAGATTTCTTCTCCACCGGTCGAATAT ACATCAGACTTGTGA
>CAGL0M07832g.aa MEQRLETEDLHSESTDISSSIDADDLLHSGDSSLGEADKQIMEWAGKLELESIDLREKSE KLINTLTNMSQELMKVSSQLVKQLENCNHSKEEDIVDQVYKLDVNINNQLQDWKKSFSDQ LKSINHNSNLGQIKNLTECMANQEANILGAIRHNSTILKDECRDIIKSQELAGAPKLQRA VDYLHEIMHNMSCQTESMNELLLSIDKQLHNIDLALIKEKDQYKVQFKAFKRSLRDMITS NRNNVEDTVVNTVQVTIERKLEDMFDKMFDQKLLGKLRLLITKGEIPVPEGSKLANAIPL NRHTNDYDLNGTTWTDSSSQDGPRTRARFRTKNKVTKPRKSEISRTIIPWCEISSPPVEY TSDL*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/CAGL/CAGL0M07832g