HomeCAGL0M03377g
highly similar to uniprot|P32775 Saccharomyces cerevisiae YEL011w GLC3 Glycogen branching enzyme, involved in glycogen accumulation
Element type: CDS
Element length: 2121 nucleotides,
on anti-sense strand of
Cagl0M: complement(385581..387701).
Other names:
CAGL-CDS1071.1
CAGL-IPF6818
Coding sequence: 707 codons.
Element length: 2121 nucleotides,
on anti-sense strand of
Cagl0M: complement(385581..387701).
Other names:
CAGL-CDS1071.1
CAGL-IPF6818
Coding sequence: 707 codons.
Database cross references:
EMBL: CR380959
GeneID: 2891502
HOGENOM: Q6FJV0
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR380959
GeneID: 2891502
HOGENOM: Q6FJV0
Homologs and Orthologs
Homologs in protein families: GL3R2291 GL3R2291.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein CAGL0M03377p 
highly similar to uniprot|P32775 Saccharomyces cerevisiae YEL011w GLC3
Protein domain map
Database cross references:
Gene3D: G3DSA:2.60.40.10
Gene3D: G3DSA:2.60.40.1180
Gene3D: G3DSA:3.20.20.80
InterPro: IPR004193
InterPro: IPR006047
InterPro: IPR006048
InterPro: IPR013780
InterPro: IPR013781
InterPro: IPR013783
KEGG: cgr:CAGL0M03377g
Pfam: PF00128
Pfam: PF02806
Pfam: PF02922
RefSeq: XP_449494.1
UniProtKB/Swiss-Prot: Q6FJV0
UniprotKB: GLGB_CANGA
Gene3D: G3DSA:2.60.40.10
Gene3D: G3DSA:2.60.40.1180
Gene3D: G3DSA:3.20.20.80
InterPro: IPR004193
InterPro: IPR006047
InterPro: IPR006048
InterPro: IPR013780
InterPro: IPR013781
InterPro: IPR013783
KEGG: cgr:CAGL0M03377g
Pfam: PF00128
Pfam: PF02806
Pfam: PF02922
RefSeq: XP_449494.1
UniProtKB/Swiss-Prot: Q6FJV0
UniprotKB: GLGB_CANGA
Gene Ontology terms
None available yet
Sequence data
>CAGL0M03377g.nt GTGTACATAATGGAAACCTCGAAAGGAGGTATATGATCGTATCCCAGGTTACTATTACAT TTTGAAAGCTAAGGTCTTTTCAACCGTAGTAAATATCTTTTTACTAAACGGTACCATACG ATACGATACCATTACCCATACCCTTTTCCTACAAGCTCCCTTCGTTGCTTTAATTGTGTA GGCAAGATATAAGCAACCAGTCAAGTACTGTCAGAACTACAATATTGCTTTTCTTTTATT CCTTCTTCATCCTCTGAGCACTCAAGTGAGAGAGCTCCACCCCACGTAGCAATCCTAACC CCCCTTCTCGCCCCCCCTCCATTCCATAAAATAATCAACAGATTGTAGGCAGTAAGTTAA TCATCCTTGTTTCTCCCCCCCCCACCCTAACCCTCGACAGGATCCACTACCAGCCTTTTA GCCTACGATTGTTTTCCTTTTTTGACAAGCTTGTTAATTTCCTAATCAGAAGAGACAAGA CAAACAACCAAAATCAGAGCCCAAAACTAATCCCAGTACAAAAATTGGGACTTCGTTTGT ACTAAGTTGCAGGAAGCTACAGACACCACCCCTTTCACACGTACTAGCCCCTCTCCTTTG GACTAATGATTCAATTTCTTACCCTTTTTGATGCCCCATTCATCTTTTACCTGTGAAGTC TAGTCAGTTTTGGCATCAGTCTTGTTTGTTTTTAGCAATTGACTAGTTGAACCGTCCCTC TGCTGCGATACCCCTAGCCCCTTGCTAGTATTCAACACTTGTATGTATCTGTTCTTTTCG ACTATTTAAACAGACCACATAGCTATCCTTGTAACAATTTGACTTTTGTTCTGTGCTGTT CACTTTGACAAAACACTTGTAAGCACTACAGTTGGTAAACTTTCTATTCGAATATAACTA GTTGTATAATACCATCATCAAAAACAATCACAATCGAATAATTTCGATATTACAATTACG AACTAGATAATTCTTCCCACCCAGAAACTAGAATAATACAATGAGTTTGACTAAGATTCC TGAAAATGTCCAGGGAGCAGTTTCCATTGACCCATGGTTAGAACCATTTGCTGATGTTCT TTCTGAGCGAAGGTACCTTGCTGATAAATGGCTATATGACATCAAGCACGCCACACCTGA TGGCTCTGAGCAAAGTTTGGTTGATTTCGCAAGAAACGCATATAAGACCTATGGTCTGCA CGCCAACCAGCAAACTAAAGAAATTGTTTACAGAGAATGGGCTCCAAATGCTCAACGTGC TTTCCTAGTCGGTGAGTTCAACAACTGGAACGAAGAGTCTCATGAAATGAAGCATAAGGA TGAATTTGGTGTATTTAGCATCACTCTAGCACCTTTGGAGAACGGCGATTTTGCCATCCC TCATGATTCCAAGATCAAAGTTATGTTTGTCTTGCCAGATGGCTCAAAAGTTTACAGAAT TCCAGCATGGATTACAAGAGCCACTCAACCAAGCAAAGAAACCGCTCAGAAATACGGTCC AACATATGAGGGTAGATTCTGGAACCCACCTAACTCTTACCAGTTTAAACACCAAAGACC TAAGTTCAATTTGGCTAACGACTCAATTAAAATTTATGAAGCTCACATTGGTATCTCTTC TCCAGAGCCAAAAGTTGCCTCCTACAAAGAATTCACTCAAAACGTTCTACCTAGAATTAA GCATCTAGGTTACGATGCTATCCAATTGATGGCTATTATGGAGCACGCTTACTATGCTTC GTTTGGTTACCAAGTTACCAACTTCTTTGCTATCAGTTCTCGTTATGGTACCCCAGAAGA TTTGAAAGAGTTAATCGATACTGCCCATAGCATGGGTATCTTGGTTCTACTAGATGTCAT TCACAGTCACGCATCTAAGAATAGTGAAGATGGTTTGAACATGTTCGATGGTTCTGACCA CCAATACTTCCATTCCTTGACTTCTGGTAGAGGTGAGCATCCATTATGGGATTCCCGTTT ATTCAATTATGGTAGCTTTGAAGTGCAAAGATTCTTGCTTGCCAACTTGGCTTACTACAT TGACGTTTACCAATTCGATGGTTTCAGATTTGATGGTGTCACCTCTATGCTTTACTTACA CCATGGTGTCGGTGCTGGTGGTGCTTTCAGCGGTGACTACAACGAGTATTTGTCCCGTGA CAGATCTGGTGTTGACCATGAAGCCCTGGCTTACTTGATGTTGGCAAATGACCTAGTCCA TGACTTGCTACCGGAATCCGCTGTTACTATTGCTGAAGATGTTTCTGGTTATCCAACTCT GTGTCTACCAAGAACTGCAGGCGGTGGTGGTTTTGACTACAGATTGGCTATGGCTCTCCC AGATATGTGGATCAAGCTTCTAAAGACCAAACAAGATGATGACTGGGATATGGGTCACAT TGTTCACACATTGACTAACAGACGTCATGGTGAAAAGGTTGTTGCCTACTGTGAATCCCA CGATCAAGCTCTAGTCGGTGACAAGACTCTTGCCTTCTGGCTAATGGATGCTGCCATGTA CACCGACATGACCGTTTTGAAGGAGCCAACATTGGTTATTGACCGTGGTATTGCTCTACA CAAAATGATTAGATTAATCACCCACTCTCTAGGTGGTGAGGCTTATCTAAACTTCGAGGG TAACGAGTTCGGCCATCCTGAATGGTTAGACTTCCCAAGAGTTGGTAACAATGACAGTTA CCATTATGCAAGAAGACAATTCAACTTGGTTGATGATGATTTATTGCGTTACAGGCATTT GAACGAGTTTGATGCTGCAATGCAAAACTGTGAATCCAAACACCAATGGTTGAATACTCC TCAAGCATATGTCTCTTTGAAGCACGAGGTTGACAAAGTTATCGCCTTCGAAAGAAATGG CCATTTGTTTGTTTTCAACTTCCATCCAACTCAAAGTTTCACTGACTACAGAATTGGTGT CGATGTTGCTGGTACTTACAAAATTGTACTAAATACTGATAGAGCAGAATTTGGTGGCCA CAATAGAATTGATGAGGCTCAAGAATTTTTCACCACTGACTTGGAATGGAACAACAGAAG GAACTTCATCCAAGTATACATTCCAAGCAGGACTGCTATCGTTTTGACCCGTCAAATGTA GAGTGTTTACTCACTAACAGTACATGCTCTTTTTACATCTTTAATTATGCCCATCATTTA TGTGTCATGATAGAAACGAACAAAGCTAGACTTTTCATGTTTGTGTCACAATACAGAAGA TAGAAATTATATAATTTGATAAAACTATAAATTATCTAAAAAATAAACTAAAATAATCAT GTTTTTTAAGAATAATAATCTCAGTACTGAGCTTTGAATATATTAATACTTTGTTCTATA AATTATCTTCCGATGAACTAGTGCCTGCACTAAGTACCTTGTTTGTATTATATTATATTA T
>CAGL0M03377g.cds ATGAGTTTGACTAAGATTCCTGAAAATGTCCAGGGAGCAGTTTCCATTGACCCATGGTTA GAACCATTTGCTGATGTTCTTTCTGAGCGAAGGTACCTTGCTGATAAATGGCTATATGAC ATCAAGCACGCCACACCTGATGGCTCTGAGCAAAGTTTGGTTGATTTCGCAAGAAACGCA TATAAGACCTATGGTCTGCACGCCAACCAGCAAACTAAAGAAATTGTTTACAGAGAATGG GCTCCAAATGCTCAACGTGCTTTCCTAGTCGGTGAGTTCAACAACTGGAACGAAGAGTCT CATGAAATGAAGCATAAGGATGAATTTGGTGTATTTAGCATCACTCTAGCACCTTTGGAG AACGGCGATTTTGCCATCCCTCATGATTCCAAGATCAAAGTTATGTTTGTCTTGCCAGAT GGCTCAAAAGTTTACAGAATTCCAGCATGGATTACAAGAGCCACTCAACCAAGCAAAGAA ACCGCTCAGAAATACGGTCCAACATATGAGGGTAGATTCTGGAACCCACCTAACTCTTAC CAGTTTAAACACCAAAGACCTAAGTTCAATTTGGCTAACGACTCAATTAAAATTTATGAA GCTCACATTGGTATCTCTTCTCCAGAGCCAAAAGTTGCCTCCTACAAAGAATTCACTCAA AACGTTCTACCTAGAATTAAGCATCTAGGTTACGATGCTATCCAATTGATGGCTATTATG GAGCACGCTTACTATGCTTCGTTTGGTTACCAAGTTACCAACTTCTTTGCTATCAGTTCT CGTTATGGTACCCCAGAAGATTTGAAAGAGTTAATCGATACTGCCCATAGCATGGGTATC TTGGTTCTACTAGATGTCATTCACAGTCACGCATCTAAGAATAGTGAAGATGGTTTGAAC ATGTTCGATGGTTCTGACCACCAATACTTCCATTCCTTGACTTCTGGTAGAGGTGAGCAT CCATTATGGGATTCCCGTTTATTCAATTATGGTAGCTTTGAAGTGCAAAGATTCTTGCTT GCCAACTTGGCTTACTACATTGACGTTTACCAATTCGATGGTTTCAGATTTGATGGTGTC ACCTCTATGCTTTACTTACACCATGGTGTCGGTGCTGGTGGTGCTTTCAGCGGTGACTAC AACGAGTATTTGTCCCGTGACAGATCTGGTGTTGACCATGAAGCCCTGGCTTACTTGATG TTGGCAAATGACCTAGTCCATGACTTGCTACCGGAATCCGCTGTTACTATTGCTGAAGAT GTTTCTGGTTATCCAACTCTGTGTCTACCAAGAACTGCAGGCGGTGGTGGTTTTGACTAC AGATTGGCTATGGCTCTCCCAGATATGTGGATCAAGCTTCTAAAGACCAAACAAGATGAT GACTGGGATATGGGTCACATTGTTCACACATTGACTAACAGACGTCATGGTGAAAAGGTT GTTGCCTACTGTGAATCCCACGATCAAGCTCTAGTCGGTGACAAGACTCTTGCCTTCTGG CTAATGGATGCTGCCATGTACACCGACATGACCGTTTTGAAGGAGCCAACATTGGTTATT GACCGTGGTATTGCTCTACACAAAATGATTAGATTAATCACCCACTCTCTAGGTGGTGAG GCTTATCTAAACTTCGAGGGTAACGAGTTCGGCCATCCTGAATGGTTAGACTTCCCAAGA GTTGGTAACAATGACAGTTACCATTATGCAAGAAGACAATTCAACTTGGTTGATGATGAT TTATTGCGTTACAGGCATTTGAACGAGTTTGATGCTGCAATGCAAAACTGTGAATCCAAA CACCAATGGTTGAATACTCCTCAAGCATATGTCTCTTTGAAGCACGAGGTTGACAAAGTT ATCGCCTTCGAAAGAAATGGCCATTTGTTTGTTTTCAACTTCCATCCAACTCAAAGTTTC ACTGACTACAGAATTGGTGTCGATGTTGCTGGTACTTACAAAATTGTACTAAATACTGAT AGAGCAGAATTTGGTGGCCACAATAGAATTGATGAGGCTCAAGAATTTTTCACCACTGAC TTGGAATGGAACAACAGAAGGAACTTCATCCAAGTATACATTCCAAGCAGGACTGCTATC GTTTTGACCCGTCAAATGTAG
>CAGL0M03377g.aa MSLTKIPENVQGAVSIDPWLEPFADVLSERRYLADKWLYDIKHATPDGSEQSLVDFARNA YKTYGLHANQQTKEIVYREWAPNAQRAFLVGEFNNWNEESHEMKHKDEFGVFSITLAPLE NGDFAIPHDSKIKVMFVLPDGSKVYRIPAWITRATQPSKETAQKYGPTYEGRFWNPPNSY QFKHQRPKFNLANDSIKIYEAHIGISSPEPKVASYKEFTQNVLPRIKHLGYDAIQLMAIM EHAYYASFGYQVTNFFAISSRYGTPEDLKELIDTAHSMGILVLLDVIHSHASKNSEDGLN MFDGSDHQYFHSLTSGRGEHPLWDSRLFNYGSFEVQRFLLANLAYYIDVYQFDGFRFDGV TSMLYLHHGVGAGGAFSGDYNEYLSRDRSGVDHEALAYLMLANDLVHDLLPESAVTIAED VSGYPTLCLPRTAGGGGFDYRLAMALPDMWIKLLKTKQDDDWDMGHIVHTLTNRRHGEKV VAYCESHDQALVGDKTLAFWLMDAAMYTDMTVLKEPTLVIDRGIALHKMIRLITHSLGGE AYLNFEGNEFGHPEWLDFPRVGNNDSYHYARRQFNLVDDDLLRYRHLNEFDAAMQNCESK HQWLNTPQAYVSLKHEVDKVIAFERNGHLFVFNFHPTQSFTDYRIGVDVAGTYKIVLNTD RAEFGGHNRIDEAQEFFTTDLEWNNRRNFIQVYIPSRTAIVLTRQM*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/CAGL/CAGL0M03377g