CAGL0J02662g

similar to uniprot|P43610 Saccharomyces cerevisiae YFR038w IRC5 Putative ATPase containing the DEAD/H helicase-related sequence motif

Genomic environment map

Element type: CDS
Element length: 2535 nucleotides,
on sense strand of
Cagl0J: 264512..267046.
Other names:
CAGL-CDS0700.1
CAGL-IPF6535
Coding sequence: 845 codons.

Database cross references:
EMBL: CR380956
GeneID: 2889751
HOGENOM: Q6FPM4

Computed results

None available yet

Homologs and Orthologs

Génolevures family GL3M4588
Multiple family of 81 members, sczltkgdpay (8 8 8 8 8 8 8 7 10 4 8)
81-member family, phyletic pattern sczltkgdy, profile (8 8 8 8 8 8 8 7 8)
Proteins: SACE0A01232p SACE0B04202p SACE0B08008p SACE0E05984p SACE0F02662p SACE0G02266p SACE0J05610p SACE0O10516p CAGL0C01683p CAGL0H06193p CAGL0I01694p CAGL0I04224p CAGL0I09614p CAGL0J02662p CAGL0L11770p CAGL0M01958p ZYRO0B11638p ZYRO0D05346p ZYRO0D16082p ZYRO0E03190p ZYRO0F04906p ZYRO0F12320p ZYRO0G12474p ZYRO0G21780p SAKL0A05918p SAKL0B03388p SAKL0B05544p SAKL0B09988p SAKL0D02772p SAKL0D11198p SAKL0F07766p SAKL0H17974p KLTH0A03410p KLTH0C05038p KLTH0D02354p KLTH0G14498p KLTH0G17028p KLTH0H05566p KLTH0H14300p KLTH0H15158p KLLA0A03069p KLLA0C17578p KLLA0E04159p KLLA0E22617p KLLA0F06710p KLLA0F07513p KLLA0F11814p KLLA0F24838p ERGO0C11330p ERGO0D06996p ERGO0E01298p ERGO0E06776p ERGO0F04554p ERGO0F18348p ERGO0G03586p ERGO0G11132p DEHA2A12276p DEHA2C08294p DEHA2C15774p DEHA2D01672p DEHA2D05456p DEHA2F06446p DEHA2G12496p PISO0A06182p PISO0B06249p PISO0E09200p PISO0E13204p PISO0F10543p PISO0F14591p PISO0I01944p PISO0I14462p PISO0J03727p PISO0J16267p YALI0B07513p YALI0C00363p YALI0C16643p YALI0D05775p YALI0E02332p YALI0E24431p YALI0F04356p YALI0F28831p
Search in: Génolevures Google

Homologs in protein family: GL3M4588
Orthologs: strict determination not possible; homologs must be refined manually

Protein CAGL0J02662p

similar to uniprot|P43610 Saccharomyces cerevisiae YFR038w

Protein domain map

Protein length: 844 amino acids
Protein family: GL3M4588

Database cross references:
InterPro: IPR000330
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014021
KEGG: cgr:CAGL0J02662g
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00176
Pfam: PF00271
RefSeq: XP_447820.1
SMART: SM00487
SMART: SM00490
UniprotKB: Q6FPM4_CANGA

Computed results for CAGL0J02662p

Blastp Genolevures

Blastp Uniprot

Gene Ontology terms

GO:0005524	ATP binding
GO:0004386	helicase activity
GO:0003677	DNA binding

Sequence data

>CAGL0J02662g.nt
ATGAATACAAGGAAGAGGTTTTTGAGGAGTGCCAGGAAGGCCGCTGCGGTTACTGTCAAC
TATGCGGAACCTGACGATAATGATCTGAGTGCTAATACTTTTGCGAGTGATGATGAGAAT
GCTGACGTCAGTGTAGACGCTGAGGATACGCCGCCTGTGTGGCTGCGAGATGATGTACGT
CCGAATGAGGACGTTCAGCTCGACTCAGACGACGAAAACGGTGGTGATAAAGACGATGAT
AGGGATCTTGACGATCTTTTACTGAAGGAAAAGGAAAAACACAGGCTGGAAGCACAGACT
AAAGAGGAAGATAGTGATGACGAAGTAAATGAGTTGGATAAAGCCAGTGTCACGTCCAAA
TTAAAGAAACTAGATGAGTTCGTAAAGCAAAGTCAGGTTTACTCAAGTATCATCGCTGAT
ACACTGTTGAAGAGGACTTTAGAGAGAACAGAGGAATCTGATGCGTCAAATAATGACCCT
GTGAAAGAACCTCCTGCGAAAAAGGCTAAAAAATCAAAATCTATACTAGATTTTTTTACT
AGAAGACAAAATACAGATGACAATAGGGTTGAGGAAATGGCTGTTGATGTTAAGAAGGAA
ACGGAGGAAGAGCGTATAGCCAAAGAGCAACCATCTTACTTGAAGAATTGTGTCCTAAAG
CCTTACCAAATGGAAGGGCTGAATTGGTTAATTACACTTTATGAAAATGGGCTAAACGGT
ATCCTAGCCGATGAGATGGGTTTGGGTAAGACTATTCAGAGTATCGCTTTATTGTCTTTC
ATTTATGAAATGGACACAAAAGGCCCCTTCTTAATTGCTGCACCATTAAGCACCGTCGAT
AATTGGATGAACGAATTCGCAAAATTCGCTCCAGAAATTCCGATTCTTAAATATTATAGT
CAAAATGGACAAGATGCAAGACAGAAATTGTTGAAAAAATTCTTCAAAAATAATAATAGG
GAAGGTGTTATTGTTACCTCATATGAGATGATAATTAGGGATGCAAATATAATAATGGGT
GAACAATGGAAGTTTCTAATTGTAGATGAAGGTCATCGTTTGAAGAATATTAACTGTCGT
TTGATACAGGAATTGAAGCGAATCAATACTTCTAACAGACTTTTACTAACAGGTACGCCC
TTACAGAATAACTTGTCAGAGTTGTGGTCTCTATTGAACTTTATTCTGCCTGACATTTTT
GCTGATTTTGAAATATTCAATAAATGGTTTGATTTCAAAGATCTTGATTTGCAAAGTAAT
TCTGCTAAATTAAATAAGTTGATTAACGATGAACTAGAAAAAAATTTGATATCCAACCTG
CATACAATCTTAAAACCATTTTTGTTAAGAAGATTGAAAAGTGTGGTCTTAAAGGACGTT
CTTCCGCCAAAGAGAGAGTACATAGTCAACTGCCCTTTATCACCAATCCAAACAAAGTTT
TACAGAATGGCTTTATCTGGAAAGCTTAAGGTGACTGTTTTCAAAGAACTCGTCAAAGCA
TTTTTCACTCTGAATCAAGAGTACATAGGGACTGTTTCAAATAAATCCATTCGAGACTTC
ATTGATTATAAATTAAGTGAAGAGCCAGATGAAGACAAAGTAACCGCCGTTATCAAGCAA
ATGGATGACATATATATGGAACACCTAAACACGTTTACCAAGAATCAGAGACTACAAAAT
ATGATGATGCAGCTACGTCAAGTTGTAGACTCTACTCTACTATTTTTCTTCCCATACATG
GAACCTGAGGACATCACATTGGATTATCTGCTTGCATCATCTGGAAAACTACAAATGTTG
CAGAAATTGGCAATACCTCTAATAAAAAAAGGTCACAAAATATTGATATTCTCTCAGTTT
GTTGGTATGTTAGATTTATTGGAGGATTGGTCTGAACTAAACTCCTTCAATTCATTGAGA
ATTGATGGTGGTGTTGATAACGAATCAAGGAAAGAATATATCGATGAATTTAACAAAAAA
GGTGACGACCATCAAATTTTCTTGCTTTCGACAAGAGCAGCTGGTCTTGGTATTAACCTT
GTAGCTGCAGATACTGTGATTATTTTTGATAGTGATTGGAACCCTCAGGTTGATCTCCAA
GCAATGGATAGATGTCACAGAATTGGCCAGACAAAACCAGTAATAGTATACAGATTTTGC
TGTGACAATACTATTGAGCACGTCATACTAACCAGAGCTGTTAATAAGAGAAAGTTAGAA
CGAATGGTTATTCAAATGGGTAAGTTCAGTAATTTGAAGAAGTTAGCCTTGAATGAGAGA
TCTTTCCTCCAACAAAGCACTGGTATGAATCCAAACAAGACCAGCAATAAAGAACTTGTA
CAGGAACTATCACAGCTTCTAATGAGTAAAGAATCAAGTATTGGATTCGAGACGTCTAAA
AAACCCAAACAAGATGATATACTCACTGAAGCTGAATTAAAGGAGTTATCAGATAGATCG
CTCAAATTTTACTCACCAGATAGAGAAGTCGAGTTCCCTCATGTAAGGCTATTTGAGACA
ACATCTGGATTTTAA

>CAGL0J02662g.cds
ATGAATACAAGGAAGAGGTTTTTGAGGAGTGCCAGGAAGGCCGCTGCGGTTACTGTCAAC
TATGCGGAACCTGACGATAATGATCTGAGTGCTAATACTTTTGCGAGTGATGATGAGAAT
GCTGACGTCAGTGTAGACGCTGAGGATACGCCGCCTGTGTGGCTGCGAGATGATGTACGT
CCGAATGAGGACGTTCAGCTCGACTCAGACGACGAAAACGGTGGTGATAAAGACGATGAT
AGGGATCTTGACGATCTTTTACTGAAGGAAAAGGAAAAACACAGGCTGGAAGCACAGACT
AAAGAGGAAGATAGTGATGACGAAGTAAATGAGTTGGATAAAGCCAGTGTCACGTCCAAA
TTAAAGAAACTAGATGAGTTCGTAAAGCAAAGTCAGGTTTACTCAAGTATCATCGCTGAT
ACACTGTTGAAGAGGACTTTAGAGAGAACAGAGGAATCTGATGCGTCAAATAATGACCCT
GTGAAAGAACCTCCTGCGAAAAAGGCTAAAAAATCAAAATCTATACTAGATTTTTTTACT
AGAAGACAAAATACAGATGACAATAGGGTTGAGGAAATGGCTGTTGATGTTAAGAAGGAA
ACGGAGGAAGAGCGTATAGCCAAAGAGCAACCATCTTACTTGAAGAATTGTGTCCTAAAG
CCTTACCAAATGGAAGGGCTGAATTGGTTAATTACACTTTATGAAAATGGGCTAAACGGT
ATCCTAGCCGATGAGATGGGTTTGGGTAAGACTATTCAGAGTATCGCTTTATTGTCTTTC
ATTTATGAAATGGACACAAAAGGCCCCTTCTTAATTGCTGCACCATTAAGCACCGTCGAT
AATTGGATGAACGAATTCGCAAAATTCGCTCCAGAAATTCCGATTCTTAAATATTATAGT
CAAAATGGACAAGATGCAAGACAGAAATTGTTGAAAAAATTCTTCAAAAATAATAATAGG
GAAGGTGTTATTGTTACCTCATATGAGATGATAATTAGGGATGCAAATATAATAATGGGT
GAACAATGGAAGTTTCTAATTGTAGATGAAGGTCATCGTTTGAAGAATATTAACTGTCGT
TTGATACAGGAATTGAAGCGAATCAATACTTCTAACAGACTTTTACTAACAGGTACGCCC
TTACAGAATAACTTGTCAGAGTTGTGGTCTCTATTGAACTTTATTCTGCCTGACATTTTT
GCTGATTTTGAAATATTCAATAAATGGTTTGATTTCAAAGATCTTGATTTGCAAAGTAAT
TCTGCTAAATTAAATAAGTTGATTAACGATGAACTAGAAAAAAATTTGATATCCAACCTG
CATACAATCTTAAAACCATTTTTGTTAAGAAGATTGAAAAGTGTGGTCTTAAAGGACGTT
CTTCCGCCAAAGAGAGAGTACATAGTCAACTGCCCTTTATCACCAATCCAAACAAAGTTT
TACAGAATGGCTTTATCTGGAAAGCTTAAGGTGACTGTTTTCAAAGAACTCGTCAAAGCA
TTTTTCACTCTGAATCAAGAGTACATAGGGACTGTTTCAAATAAATCCATTCGAGACTTC
ATTGATTATAAATTAAGTGAAGAGCCAGATGAAGACAAAGTAACCGCCGTTATCAAGCAA
ATGGATGACATATATATGGAACACCTAAACACGTTTACCAAGAATCAGAGACTACAAAAT
ATGATGATGCAGCTACGTCAAGTTGTAGACTCTACTCTACTATTTTTCTTCCCATACATG
GAACCTGAGGACATCACATTGGATTATCTGCTTGCATCATCTGGAAAACTACAAATGTTG
CAGAAATTGGCAATACCTCTAATAAAAAAAGGTCACAAAATATTGATATTCTCTCAGTTT
GTTGGTATGTTAGATTTATTGGAGGATTGGTCTGAACTAAACTCCTTCAATTCATTGAGA
ATTGATGGTGGTGTTGATAACGAATCAAGGAAAGAATATATCGATGAATTTAACAAAAAA
GGTGACGACCATCAAATTTTCTTGCTTTCGACAAGAGCAGCTGGTCTTGGTATTAACCTT
GTAGCTGCAGATACTGTGATTATTTTTGATAGTGATTGGAACCCTCAGGTTGATCTCCAA
GCAATGGATAGATGTCACAGAATTGGCCAGACAAAACCAGTAATAGTATACAGATTTTGC
TGTGACAATACTATTGAGCACGTCATACTAACCAGAGCTGTTAATAAGAGAAAGTTAGAA
CGAATGGTTATTCAAATGGGTAAGTTCAGTAATTTGAAGAAGTTAGCCTTGAATGAGAGA
TCTTTCCTCCAACAAAGCACTGGTATGAATCCAAACAAGACCAGCAATAAAGAACTTGTA
CAGGAACTATCACAGCTTCTAATGAGTAAAGAATCAAGTATTGGATTCGAGACGTCTAAA
AAACCCAAACAAGATGATATACTCACTGAAGCTGAATTAAAGGAGTTATCAGATAGATCG
CTCAAATTTTACTCACCAGATAGAGAAGTCGAGTTCCCTCATGTAAGGCTATTTGAGACA
ACATCTGGATTTTAA

>CAGL0J02662g.aa
MNTRKRFLRSARKAAAVTVNYAEPDDNDLSANTFASDDENADVSVDAEDTPPVWLRDDVR
PNEDVQLDSDDENGGDKDDDRDLDDLLLKEKEKHRLEAQTKEEDSDDEVNELDKASVTSK
LKKLDEFVKQSQVYSSIIADTLLKRTLERTEESDASNNDPVKEPPAKKAKKSKSILDFFT
RRQNTDDNRVEEMAVDVKKETEEERIAKEQPSYLKNCVLKPYQMEGLNWLITLYENGLNG
ILADEMGLGKTIQSIALLSFIYEMDTKGPFLIAAPLSTVDNWMNEFAKFAPEIPILKYYS
QNGQDARQKLLKKFFKNNNREGVIVTSYEMIIRDANIIMGEQWKFLIVDEGHRLKNINCR
LIQELKRINTSNRLLLTGTPLQNNLSELWSLLNFILPDIFADFEIFNKWFDFKDLDLQSN
SAKLNKLINDELEKNLISNLHTILKPFLLRRLKSVVLKDVLPPKREYIVNCPLSPIQTKF
YRMALSGKLKVTVFKELVKAFFTLNQEYIGTVSNKSIRDFIDYKLSEEPDEDKVTAVIKQ
MDDIYMEHLNTFTKNQRLQNMMMQLRQVVDSTLLFFFPYMEPEDITLDYLLASSGKLQML
QKLAIPLIKKGHKILIFSQFVGMLDLLEDWSELNSFNSLRIDGGVDNESRKEYIDEFNKK
GDDHQIFLLSTRAAGLGINLVAADTVIIFDSDWNPQVDLQAMDRCHRIGQTKPVIVYRFC
CDNTIEHVILTRAVNKRKLERMVIQMGKFSNLKKLALNERSFLQQSTGMNPNKTSNKELV
QELSQLLMSKESSIGFETSKKPKQDDILTEAELKELSDRSLKFYSPDREVEFPHVRLFET
TSGF*

Legend and notes

Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences

Color	Nucleotide sequence and Coding sequence	Predicted translation product
RED	start and stop codons	Initial methionine and sequence end
BLUE	coding sequence	protein sequence
grey	non-coding sequence (upstream, downstream or intron)
grey	donor and acceptor splicing sites

Genetic Elements

CAGL0J02662g

CAGL0J02662g

Genomic environment map

Computed results

Homologs and Orthologs

Protein CAGL0J02662p

Protein domain map

Computed results for CAGL0J02662p

Gene Ontology terms

Sequence data

Nucleotide sequence

Coding sequence

Predicted translation product

Legend and notes