HomeCAGL0I09614g
highly similar to uniprot|Q08773 Saccharomyces cerevisiae YOR304w ISW2 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes
Element type: CDS
Element length: 3120 nucleotides,
on sense strand of
Cagl0I: 917977..921096.
Other names:
CAGL-CDS0389.1
CAGL-IPF7731
Coding sequence: 1040 codons.
Element length: 3120 nucleotides,
on sense strand of
Cagl0I: 917977..921096.
Other names:
CAGL-CDS0389.1
CAGL-IPF7731
Coding sequence: 1040 codons.
Database cross references:
EMBL: CR380955
GeneID: 2888938
HOGENOM: Q6FQ29
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR380955
GeneID: 2888938
HOGENOM: Q6FQ29
Homologs and Orthologs
Homologs in protein family: GL3M4588Orthologs: strict determination not possible; homologs must be refined manually
Protein CAGL0I09614p 
highly similar to uniprot|Q08773 Saccharomyces cerevisiae YOR304w ISW2 or uniprot|P38144 Saccharomyces cerevisiae YBR245c ISW1
Protein domain map
Database cross references:
InterPro: IPR000330
InterPro: IPR001005
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014021
InterPro: IPR015194
InterPro: IPR015195
KEGG: cgr:CAGL0I09614g
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00176
Pfam: PF00271
Pfam: PF09110
Pfam: PF09111
RefSeq: XP_447665.1
SMART: SM00487
SMART: SM00490
SMART: SM00717
UniProtKB/TrEMBL: Q6FQ29
UniprotKB: Q6FQ29_CANGA
InterPro: IPR000330
InterPro: IPR001005
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014021
InterPro: IPR015194
InterPro: IPR015195
KEGG: cgr:CAGL0I09614g
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00176
Pfam: PF00271
Pfam: PF09110
Pfam: PF09111
RefSeq: XP_447665.1
SMART: SM00487
SMART: SM00490
SMART: SM00717
UniProtKB/TrEMBL: Q6FQ29
UniprotKB: Q6FQ29_CANGA
Gene Ontology terms
| GO:0043044 | ATP-dependent chromatin remodeling |
| GO:0031491 | nucleosome binding |
| GO:0016585 | chromatin remodeling complex |
| GO:0005524 | ATP binding |
| GO:0004386 | helicase activity |
| GO:0003677 | DNA binding |
Sequence data
>CAGL0I09614g.nt CTAGGGGCGCCAACGTAACGATATTCCCACACAACGCTAGGATACAGGACGTCGCTGGTC AATTCGACGGTGTATTCCTATCGAATGGGCCTGGCAACCCGGAGACCTGCCACGAGACCA TCGAGAACTTGAAGGAGCTGCTGGCCAACGAGGACTTGCAACAGCTGCCCATCTTCGGTA TCTGTCTGGGCCACCAGCTGCTGGCCTTGGCCTCCGGCGGCAAGACACACAAGCTGCAGT ACGGTAACAGAGCACACAACATCCCAGCAATGGACCTGACCACGGGCCAATGCCACATCA CATCCCAGAACCACGGCTACGCAGTCGACCCACAAACACTCCCACAAGAAGAGTGGAAAC CATACTTCATAAACTTGAACGACCAATCCAACGAAGGAATGATCCACACCACAAGACCTA TCTTCTCAACGCAGTTCCACCCAGAGGCAAAGGGTGGCCCTCTGGACACAATGCCTCTGT TCGACAAGTTCTTCAACAACATCGAGTGCTACAAGACCCACCTCAGCCAGTCCAGCTACA GAATGGTCTCCCAGATCCCAGCAATCGACAAAAAGGAGATCATGGCCTAGACCAACCATC TTGCATCCGTATTACATACTACATATAAAACTAAAAAGATAATATACTAATTCCTCTCGC ATTTTTAGCCCCATCGCACTACTATTGCTTATTATCGGCCAATTGCCAAATTTTTTTTCA GTGAAAGACGCACACATTGGCTGGTGCCAAAAGAAAAAAGTATATAAGCAGACAAAGGAT TCTTGAAAAATTGTTTCTCGCAGCGTTCAGGGAAACAGTTTTGAGGACAACAGGCCCTGC AAAGACCATTTGATTATCTTTGGAAAGGAGGGTGAATAGAGCAATATCTGCCGTGGACGT GCTTGGAAAAACTGGATCATTGATTGTTGATTGTTGATTGCTGAAAGTTAAAAGTTAAGA AGTTAGTACGCGTTTGATTCATCCGAGGTCGAAAAGTAAGATGACTTCTGAGGTGTATAC GGTTGCGGACCGTCCCAAGGAGTATTGGGATAAGCGGAAGGCCAAGTTTATTCTGGCGGA TGATCCGAAAGTCGCGAAACAGAAGGACAGCGGTGACACTTACAACAGGTTCAAGTACTT GCTTGGACTCACCGATCTGTTCAGGCATTTCATGAGTCTGAAAGCTAAGAATGATAAGAA CATACAGAAGCTGTTAAAGACGCTGGACGCAGAGAGTTCTGCAAAGAGTGGTAAAGCTGA TCCGGGGTCGCGTCATCATCGTAAGAGTGAGAAAGAAGAAGATGCAGAATTGATGGCTGA AGAAGAAGCTGAGGTTGATGAAGAAGACGACCTGAACTTTGTCACTGAATCTCCATCCTA TATCCAGTCAGGTAAATTGAGAGACTATCAGATACAGGGTCTAAACTGGATGATCTCCTT ACATGAAAATAAGATCTCTGGTATCCTAGCAGATGAAATGGGTCTAGGTAAAACTTTACA GACCATTTCATTCCTTGGTTATTTGAGATATGTCAAGAAAATAGAAGGTCCGTTTCTGGT CATCGTTCCAAAATCTACTCTGGACAATTGGAGAAGAGAGTTTTTCAAGTGGACTCCAAA TGTTAGCACCACGGTTTTACAAGGTACTAAAGAACAAAGACAAGATATTTTACAGAATAT TGTATTAGAGGCAAGATTTGATGTCCTTATCACGTCCTATGAAATGGTTATCAGGGAGAA AGGTTACCTAAAGCGTCTGGCCTGGGAATACATCGTAATTGATGAAGCACATCGTATCAA GAATGAGCAAAGTGCGTTGTCACAGATAATTAGACTGTTCTATTCGAAAAATAGATTGCT TATTACCGGTACGCCATTGCAAAATAACTTACATGAACTTTGGGCTTTACTGAACTTCTT GCTGCCGGACGTCTTTGGGGATTCTGAAGTCTTTGATGATTGGTTCCAGCAAAATAATAG TGATCAAGACCAAGAAGTAGTGGTTCAGCAATTGCATGCAGTGTTAAACCCATTCTTATT AAGAAGAATAAAAGCTGATGTCGAAAAATCATTGCTGCCGAAGATTGAGACAAATGTTTA CGTGGGGATGACGGATATGCAAGTTCAATGGTATAAATCTCTTTTGGAAAAGGATATTGA TGCCGTTAATGGTGCTGTTGGAAAAAGAGAAGGTAAAACCAGACTTTTGAATATTGTTAT GCAGTTGAGAAAATGTTGTAATCATCCATATCTGTTTGAGGGTGCAGAACCTGGACCCCC ATATACTACAGACGAACATTTGATCTTTAACGCAGGTAAAATGATTGTCTTGGATAAATT GCTAAAAAGGTTGAAAGAGAAGGGCTCGAGAGTTTTAATTTTCAGTCAAATGTCTCGTTT GTTGGATATTTTAGAGGATTACTGTTATTTCAGAAACTATAATTATTGTAGAATTGATGG TTCCACAAGTCACGAAGAGAGAATTGATGCCATTGATGAATATAATAAGCCTAACTCTGA AAAATTTGTTTTCTTATTGACTACAAGAGCTGGTGGTTTGGGTATTAATCTGGTCACTGC TGATACAGTTGTGCTATTTGACTCAGACTGGAATCCTCAAGCAGATTTGCAAGCGATGGA CAGAGCACATAGAATTGGCCAAAAGAAACAAGTGCACGTTTATAGATTTGTTACTGAGAA TGCAATTGAGGAAAAGGTTTTGGAGAGAGCAGCTCAGAAATTGAGACTTGACCAGTTGGT TATTCAACAAGGTTCTGGTAAGAAAACCGCAAATCTGGGTAATTCTAAGGATGATTTGAT TGAAATGATTCAGTATGGTGCTAAGAATGTTTTTGAAAAGAATGGAACCACAATAAGTGT GGATGCAGATATTGATGAAATCTTGAAGAAGGGTGAGGCTAAAACTCATGAGTTGAATGC AAGATATGAAGCGCTTGGTCTTGATGATTTACAAAGATTTAACGGTATGGAAAATCAATC AGCTTATGAATGGAACGGTAAGACGTTCGAAAAGAAGGCCAAGGATACAGTGACAGAGTG GATCAATCCTTCAAGAAGAGAAAGGAGACGTGAGCAGACAACGTATTCGGTTGATGACTA TTATAAGGATATAATTGGTGGAGGAAGTAAATCTAACAAAGGAACTCCTCAACCGAAGTT ACCAAAAGCTCCTAAAGTAACACACGGTCAAGATTATCAATTTTTTCCTAAAGAGTTTTA TGAATTACAGGAAAAAGAACAACTCTCATATAAGAAGAAGATTAACTTTAAGGTAACATC GTCTGATGTGTCAATCGAAACTGAAGAGGATGATGAAGAGGGTGAGAAGCAATTGACCTC GAAGGAGAAGAAGGCTCTTACTGATGCTAAAATCAAGGAAGAGCAAGAAAAGATTGACAA TGCACCAGATTTTACAGATGAGGATGAACTCGAGAAACAAAGGATGTTGGATACAGCGTT TACAAACTGGAATAGAAGAGATCTGCTCTCCTTCATTAGTGCATGTGCAAAGTTTGGCAG ATCAAATATGAACAAAATTAAATATGCGATTGATTCCAAAACACCAGAAGAAGTTGAAGA ATATGCCAAGGTATTTTGGGAACGTTACACCGAAATTAATGGTTACGAGAAATATATCAA CTCAATCGAAAATGGTGAAAGGAAACTTGCCAAGCTTGAATTCCAGGAACAGTTATTGAA CGAAAAGCTTGATCAGTATAACTACCCATTTTACGAGTTGAGTATACAATACCCTCCGAA CAATGCTAGGAGGACCTATAATACAATGGAGGACAAATTCATATTAATGACGGTAAGAAA ATACGGTCTGCGGGCGGAAAGGTTATATGAAAAAATAAAACAGGATATTATGGAGAGTGA TTTGTTCAAATTTGATTGGTTTATCAGAACACGTTCCATACATGAGCTTTCAAAGAGAGT TACCACATTATTAACACTCATTACAAGAGAGTTTGATAATCCTGATGCTAGGAAGAAACG TTCTCGTCCAGGAACTAAGGAGGATATGGACGGTCTCGATGAAGGAACCGAAAATCCAGA TCATATGGAGAAAAAACCTAAGCTTCCCTCTTCCGCATAAACTGCTAGGTTTATGACTCA TATCTAGCATTGTTTCGCTAAAGCACGTAGCTAAGTTGTAATACTATTTAACTCAAATAG ACTGTTCATAAATATTTCTAACTAAATAAGTTGGATTAAGGACCTCTTTAATACATTATA TATAATAGGACTTTTCCTTTTTATCATCGCTCGTTTTCCTAGAACTGAAATACTGGTGAG CAAACCCATCTGGATTCCTATCGTTGGACAAATTTGAACTTTCTCTAATTATATCCGGTC TAAATTTGCCTATAGCTTCATCTTTAATTTCATTTTGTTT
>CAGL0I09614g.cds ATGACTTCTGAGGTGTATACGGTTGCGGACCGTCCCAAGGAGTATTGGGATAAGCGGAAG GCCAAGTTTATTCTGGCGGATGATCCGAAAGTCGCGAAACAGAAGGACAGCGGTGACACT TACAACAGGTTCAAGTACTTGCTTGGACTCACCGATCTGTTCAGGCATTTCATGAGTCTG AAAGCTAAGAATGATAAGAACATACAGAAGCTGTTAAAGACGCTGGACGCAGAGAGTTCT GCAAAGAGTGGTAAAGCTGATCCGGGGTCGCGTCATCATCGTAAGAGTGAGAAAGAAGAA GATGCAGAATTGATGGCTGAAGAAGAAGCTGAGGTTGATGAAGAAGACGACCTGAACTTT GTCACTGAATCTCCATCCTATATCCAGTCAGGTAAATTGAGAGACTATCAGATACAGGGT CTAAACTGGATGATCTCCTTACATGAAAATAAGATCTCTGGTATCCTAGCAGATGAAATG GGTCTAGGTAAAACTTTACAGACCATTTCATTCCTTGGTTATTTGAGATATGTCAAGAAA ATAGAAGGTCCGTTTCTGGTCATCGTTCCAAAATCTACTCTGGACAATTGGAGAAGAGAG TTTTTCAAGTGGACTCCAAATGTTAGCACCACGGTTTTACAAGGTACTAAAGAACAAAGA CAAGATATTTTACAGAATATTGTATTAGAGGCAAGATTTGATGTCCTTATCACGTCCTAT GAAATGGTTATCAGGGAGAAAGGTTACCTAAAGCGTCTGGCCTGGGAATACATCGTAATT GATGAAGCACATCGTATCAAGAATGAGCAAAGTGCGTTGTCACAGATAATTAGACTGTTC TATTCGAAAAATAGATTGCTTATTACCGGTACGCCATTGCAAAATAACTTACATGAACTT TGGGCTTTACTGAACTTCTTGCTGCCGGACGTCTTTGGGGATTCTGAAGTCTTTGATGAT TGGTTCCAGCAAAATAATAGTGATCAAGACCAAGAAGTAGTGGTTCAGCAATTGCATGCA GTGTTAAACCCATTCTTATTAAGAAGAATAAAAGCTGATGTCGAAAAATCATTGCTGCCG AAGATTGAGACAAATGTTTACGTGGGGATGACGGATATGCAAGTTCAATGGTATAAATCT CTTTTGGAAAAGGATATTGATGCCGTTAATGGTGCTGTTGGAAAAAGAGAAGGTAAAACC AGACTTTTGAATATTGTTATGCAGTTGAGAAAATGTTGTAATCATCCATATCTGTTTGAG GGTGCAGAACCTGGACCCCCATATACTACAGACGAACATTTGATCTTTAACGCAGGTAAA ATGATTGTCTTGGATAAATTGCTAAAAAGGTTGAAAGAGAAGGGCTCGAGAGTTTTAATT TTCAGTCAAATGTCTCGTTTGTTGGATATTTTAGAGGATTACTGTTATTTCAGAAACTAT AATTATTGTAGAATTGATGGTTCCACAAGTCACGAAGAGAGAATTGATGCCATTGATGAA TATAATAAGCCTAACTCTGAAAAATTTGTTTTCTTATTGACTACAAGAGCTGGTGGTTTG GGTATTAATCTGGTCACTGCTGATACAGTTGTGCTATTTGACTCAGACTGGAATCCTCAA GCAGATTTGCAAGCGATGGACAGAGCACATAGAATTGGCCAAAAGAAACAAGTGCACGTT TATAGATTTGTTACTGAGAATGCAATTGAGGAAAAGGTTTTGGAGAGAGCAGCTCAGAAA TTGAGACTTGACCAGTTGGTTATTCAACAAGGTTCTGGTAAGAAAACCGCAAATCTGGGT AATTCTAAGGATGATTTGATTGAAATGATTCAGTATGGTGCTAAGAATGTTTTTGAAAAG AATGGAACCACAATAAGTGTGGATGCAGATATTGATGAAATCTTGAAGAAGGGTGAGGCT AAAACTCATGAGTTGAATGCAAGATATGAAGCGCTTGGTCTTGATGATTTACAAAGATTT AACGGTATGGAAAATCAATCAGCTTATGAATGGAACGGTAAGACGTTCGAAAAGAAGGCC AAGGATACAGTGACAGAGTGGATCAATCCTTCAAGAAGAGAAAGGAGACGTGAGCAGACA ACGTATTCGGTTGATGACTATTATAAGGATATAATTGGTGGAGGAAGTAAATCTAACAAA GGAACTCCTCAACCGAAGTTACCAAAAGCTCCTAAAGTAACACACGGTCAAGATTATCAA TTTTTTCCTAAAGAGTTTTATGAATTACAGGAAAAAGAACAACTCTCATATAAGAAGAAG ATTAACTTTAAGGTAACATCGTCTGATGTGTCAATCGAAACTGAAGAGGATGATGAAGAG GGTGAGAAGCAATTGACCTCGAAGGAGAAGAAGGCTCTTACTGATGCTAAAATCAAGGAA GAGCAAGAAAAGATTGACAATGCACCAGATTTTACAGATGAGGATGAACTCGAGAAACAA AGGATGTTGGATACAGCGTTTACAAACTGGAATAGAAGAGATCTGCTCTCCTTCATTAGT GCATGTGCAAAGTTTGGCAGATCAAATATGAACAAAATTAAATATGCGATTGATTCCAAA ACACCAGAAGAAGTTGAAGAATATGCCAAGGTATTTTGGGAACGTTACACCGAAATTAAT GGTTACGAGAAATATATCAACTCAATCGAAAATGGTGAAAGGAAACTTGCCAAGCTTGAA TTCCAGGAACAGTTATTGAACGAAAAGCTTGATCAGTATAACTACCCATTTTACGAGTTG AGTATACAATACCCTCCGAACAATGCTAGGAGGACCTATAATACAATGGAGGACAAATTC ATATTAATGACGGTAAGAAAATACGGTCTGCGGGCGGAAAGGTTATATGAAAAAATAAAA CAGGATATTATGGAGAGTGATTTGTTCAAATTTGATTGGTTTATCAGAACACGTTCCATA CATGAGCTTTCAAAGAGAGTTACCACATTATTAACACTCATTACAAGAGAGTTTGATAAT CCTGATGCTAGGAAGAAACGTTCTCGTCCAGGAACTAAGGAGGATATGGACGGTCTCGAT GAAGGAACCGAAAATCCAGATCATATGGAGAAAAAACCTAAGCTTCCCTCTTCCGCATAA
>CAGL0I09614g.aa MTSEVYTVADRPKEYWDKRKAKFILADDPKVAKQKDSGDTYNRFKYLLGLTDLFRHFMSL KAKNDKNIQKLLKTLDAESSAKSGKADPGSRHHRKSEKEEDAELMAEEEAEVDEEDDLNF VTESPSYIQSGKLRDYQIQGLNWMISLHENKISGILADEMGLGKTLQTISFLGYLRYVKK IEGPFLVIVPKSTLDNWRREFFKWTPNVSTTVLQGTKEQRQDILQNIVLEARFDVLITSY EMVIREKGYLKRLAWEYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHEL WALLNFLLPDVFGDSEVFDDWFQQNNSDQDQEVVVQQLHAVLNPFLLRRIKADVEKSLLP KIETNVYVGMTDMQVQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFE GAEPGPPYTTDEHLIFNAGKMIVLDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRNY NYCRIDGSTSHEERIDAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVVLFDSDWNPQ ADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVLERAAQKLRLDQLVIQQGSGKKTANLG NSKDDLIEMIQYGAKNVFEKNGTTISVDADIDEILKKGEAKTHELNARYEALGLDDLQRF NGMENQSAYEWNGKTFEKKAKDTVTEWINPSRRERRREQTTYSVDDYYKDIIGGGSKSNK GTPQPKLPKAPKVTHGQDYQFFPKEFYELQEKEQLSYKKKINFKVTSSDVSIETEEDDEE GEKQLTSKEKKALTDAKIKEEQEKIDNAPDFTDEDELEKQRMLDTAFTNWNRRDLLSFIS ACAKFGRSNMNKIKYAIDSKTPEEVEEYAKVFWERYTEINGYEKYINSIENGERKLAKLE FQEQLLNEKLDQYNYPFYELSIQYPPNNARRTYNTMEDKFILMTVRKYGLRAERLYEKIK QDIMESDLFKFDWFIRTRSIHELSKRVTTLLTLITREFDNPDARKKRSRPGTKEDMDGLD EGTENPDHMEKKPKLPSSA*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/CAGL/CAGL0I09614g