HomeCAGL0I07667g
similar to uniprot|Q12400 Saccharomyces cerevisiae YOL093w TRM10 tRNA methyltransferase, methylates the N-1 position of guanosine in tRNAs
Element type: CDS
Element length: 864 nucleotides,
on sense strand of
Cagl0I: 737449..738312.
Other names:
CAGL-CDS3707.1
CAGL-IPF4279
Coding sequence: 288 codons.
Element length: 864 nucleotides,
on sense strand of
Cagl0I: 737449..738312.
Other names:
CAGL-CDS3707.1
CAGL-IPF4279
Coding sequence: 288 codons.
Database cross references:
EMBL: CR380955
GeneID: 2889002
HOGENOM: Q6FQB2
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR380955
GeneID: 2889002
HOGENOM: Q6FQB2
Homologs and Orthologs
Homologs in protein families: GL3R1757 GL3R1757.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein CAGL0I07667p 
similar to uniprot|Q12400 Saccharomyces cerevisiae YOL093w
Protein domain map
Database cross references:
InterPro: IPR007356
InterPro: IPR016009
InterPro: IPR016653
KEGG: cgr:CAGL0I07667g
PANTHER: PTHR13563
PIRSF: PIRSF016323
Pfam: PF01746
RefSeq: XP_447582.1
UniProtKB/Swiss-Prot: Q6FQB2
UniprotKB: TRM10_CANGA
InterPro: IPR007356
InterPro: IPR016009
InterPro: IPR016653
KEGG: cgr:CAGL0I07667g
PANTHER: PTHR13563
PIRSF: PIRSF016323
Pfam: PF01746
RefSeq: XP_447582.1
UniProtKB/Swiss-Prot: Q6FQB2
UniprotKB: TRM10_CANGA
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>CAGL0I07667g.nt GTGACCAGCCACAGTACTTTGTAGGTTGTTGATAGCTTGTCTCATATCACCTTCCGCGGT AAATATAATGGCCTCCAAACCGTCATTTGTGTACTGAACATCCTCAGCTTTTATTATCTC CAGTAGTCTCTTCAATACCTGTTCATCTGATAGCTTCGAGTAGCGCAGAATAGCACATCT ACTCTGTAGTGGCTCTATGATCTTGTTTGACTGATTACATGCGAAAGCAAATCTGGTGGA ATTAGAGTACAATTCCATAGTACGTCTTAAAGCCTGTTGTGCGCCCGCAGTCATAGAATC AGCTTCATCAAGAATAATTATCTTGTGTTTACCCGGTGGTAAATGGCACTTCTTCTGAGC AAAGTGCTTTATCTGATTTCTGACAACATCGATACCTCTATCATCAGATGCGTTTAATTC TAGCACAGCTTGTGAATATGATTCGCCCAGCATCTCATGTGCCAGGCAGTGAATCGACGT GGTTTTACCAATACCTGGTAGACCAGAAATGATCATGTGCGGCATGTTACCATCTGCTGC TATCTGTTGTAACCGCTCCACAGTCTCCTCATTTCCCACTATATCCTTTAGCAGGTGAGG GCGGTACTTCTCTACCCATGGGAGCTCTAAAGTAAGTGTAGCTTTAGACATTGGTTTCAC CTAAATGACGCGTTTTCTTATACCCAGCTTGAATTCAACTTTAAACCCCCACTAGCTCTT CTAAGATAAGCAAGAGCTGAATGTTCTTAGCGCAATTGTCTGATTGGTATGAGTGCAGTT GAATGCCTGGTGTGGAATTCAATGTAACATGCATTCAGGAAGTATTTCAGGTTATACAAT TGTGAGTTTGGCAAGCTAAGGATCCAAGCAGTCGCAGCGAAAATTTTGAAAAAAAAAAAA TCGATGCGATGAGCTCTTTGCAATGCATAAGACTGTGTGCTATTGGAAGTCATTTACGTG GAGCATAAGAGGTCTTGGTCGCAGACCAGTGTTGTAGAGAATGAGTGACACTAGTGATCT GGTGGATGGGAAGTGGCAGCGCTTACCGCCCGTGCCTGAGGGCATGTCCAAGAGCCAATG GAAGAAGCAATGGAGGAGGCAGATGTATGAGGCTAAGAAAGAAGAGTATGCGGAGGTACG CAAGGAGAAGCGGAAGCGTGCCAAGGAGAACAGGCGGAAGAAGATACAAGAGTACATTGA TCGCGGTGAGGAGGTGCCTGCCGAGTTGAAACGTGAGCCTCGTGTGAACAGGGATCAAGT TGCATCAGGTATCAACATCATTCTGGATTGTGCGTTCGATGATCTCATGAATGACAAAGA GATAGTGAGTACGTCTAATCAGATTACTAGGGCCTACTCCGCGAACAGAAGGGCCAGCCA ATATGCGAACATTACGGTGACCAGCTTCAACAAGCGGTTGAAGGAAAGGTTTGACAAGGC ATTGGACGATTGCAATTACCCGCAATGGCAGAACTTCAAGTTTGTCAGTGACGAGAAGCT AATCACAGAGGGCGATAAGTCGAAGATGGTGTATTTAACAGCTGATACGGAGGAGCAGCT GGACACACTGGAACCAGGTATGACATATATTGTTGGTGGTATAGTGGATAAGAACAGGCA CAAGTTGTTGTGCTACAATAAGGCCAAAGAGCTCGGTATCCCCACGAGAAGGTTACCTAT CGGGGAGTACATCAAGATAGAAGGCCGCAAAGTGCTAACCACCACACACGTGATACAACT GATGTTAAAGTACTGTGAGTCCCGCGACTGGAAGGAATCGTTCGAATCCGTGATCCCTTC GAGAAAGCTAGACCCAGTGAAAGAGAAGGAGCAGCAGCAGCAGCAGCAGCAGCAACAGCA GTAATGTATAGTATATCAATGTATAAGTAGACAGAGTGCTATAGAGACGACTCAATTACA ATTCCACACGTAAAACACATGATATTCTTATTGAGGGGGGGGGACTTCGGCCATTATCCC ATCGGAATTTCAGGATCTTCCTTTGCAGTTTCTGAAGGAAAATGGGATAAAAGGAATTTA TACGTATCATCTGCATAGAATATCTAGTACAAAAGGGCTGGATTTGAGAAAGAAAATTGC AAAATATCGTTGGGATAAAGGCTTCTCATACTAAAGAAGTTGCGAGACACATGACGGTCA AGTA
Coding sequence
>CAGL0I07667g.cds ATGAGTGACACTAGTGATCTGGTGGATGGGAAGTGGCAGCGCTTACCGCCCGTGCCTGAG GGCATGTCCAAGAGCCAATGGAAGAAGCAATGGAGGAGGCAGATGTATGAGGCTAAGAAA GAAGAGTATGCGGAGGTACGCAAGGAGAAGCGGAAGCGTGCCAAGGAGAACAGGCGGAAG AAGATACAAGAGTACATTGATCGCGGTGAGGAGGTGCCTGCCGAGTTGAAACGTGAGCCT CGTGTGAACAGGGATCAAGTTGCATCAGGTATCAACATCATTCTGGATTGTGCGTTCGAT GATCTCATGAATGACAAAGAGATAGTGAGTACGTCTAATCAGATTACTAGGGCCTACTCC GCGAACAGAAGGGCCAGCCAATATGCGAACATTACGGTGACCAGCTTCAACAAGCGGTTG AAGGAAAGGTTTGACAAGGCATTGGACGATTGCAATTACCCGCAATGGCAGAACTTCAAG TTTGTCAGTGACGAGAAGCTAATCACAGAGGGCGATAAGTCGAAGATGGTGTATTTAACA GCTGATACGGAGGAGCAGCTGGACACACTGGAACCAGGTATGACATATATTGTTGGTGGT ATAGTGGATAAGAACAGGCACAAGTTGTTGTGCTACAATAAGGCCAAAGAGCTCGGTATC CCCACGAGAAGGTTACCTATCGGGGAGTACATCAAGATAGAAGGCCGCAAAGTGCTAACC ACCACACACGTGATACAACTGATGTTAAAGTACTGTGAGTCCCGCGACTGGAAGGAATCG TTCGAATCCGTGATCCCTTCGAGAAAGCTAGACCCAGTGAAAGAGAAGGAGCAGCAGCAG CAGCAGCAGCAGCAACAGCAGTAA
Predicted translation product
>CAGL0I07667g.aa MSDTSDLVDGKWQRLPPVPEGMSKSQWKKQWRRQMYEAKKEEYAEVRKEKRKRAKENRRK KIQEYIDRGEEVPAELKREPRVNRDQVASGINIILDCAFDDLMNDKEIVSTSNQITRAYS ANRRASQYANITVTSFNKRLKERFDKALDDCNYPQWQNFKFVSDEKLITEGDKSKMVYLT ADTEEQLDTLEPGMTYIVGGIVDKNRHKLLCYNKAKELGIPTRRLPIGEYIKIEGRKVLT TTHVIQLMLKYCESRDWKESFESVIPSRKLDPVKEKEQQQQQQQQQQ*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/CAGL/CAGL0I07667p