HomeCAGL0I01694g
similar to uniprot|P40352 Saccharomyces cerevisiae YJR035w RAD26 Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesions
Element type: CDS
Element length: 3216 nucleotides,
on anti-sense strand of
Cagl0I: complement(141422..144637).
Other names:
CAGL-CDS0353.1
CAGL-IPF2093
Coding sequence: 1072 codons.
Element length: 3216 nucleotides,
on anti-sense strand of
Cagl0I: complement(141422..144637).
Other names:
CAGL-CDS0353.1
CAGL-IPF2093
Coding sequence: 1072 codons.
Database cross references:
EMBL: CR380955
GeneID: 2889326
HOGENOM: Q6FR17
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR380955
GeneID: 2889326
HOGENOM: Q6FR17
Homologs and Orthologs
Homologs in protein family: GL3M4588Orthologs: strict determination not possible; homologs must be refined manually
Protein CAGL0I01694p 
similar to uniprot|P40352 Saccharomyces cerevisiae YJR035w RAD26 DNA repair and recombination protein
Protein domain map
Database cross references:
InterPro: IPR000330
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014021
KEGG: cgr:CAGL0I01694g
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00176
Pfam: PF00271
RefSeq: XP_447327.1
SMART: SM00487
SMART: SM00490
UniProtKB/TrEMBL: Q6FR17
UniprotKB: Q6FR17_CANGA
InterPro: IPR000330
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014021
KEGG: cgr:CAGL0I01694g
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00176
Pfam: PF00271
RefSeq: XP_447327.1
SMART: SM00487
SMART: SM00490
UniProtKB/TrEMBL: Q6FR17
UniprotKB: Q6FR17_CANGA
Sequence data
>CAGL0I01694g.nt GCAAATTTGGTTTATGATAGCATATTATTACTCTTGACGAATATTTCACATGATCTGCTA TGCCCCTCTGTTTAAATCAATATCGCTTCCAATATTTGAATTAAACCTTGGTTGAGATAA TAGAAAGCTATCATGAAGTATTTAGAGGTATGAGGCTAATTGGTCTGTAGTCTATACAAC TAACATTTTGTATCAAGTATCTTGTGCGTTTCTTACAGTTTTGGGAGTGTTTGTATTGCC AGTTTATGAGTGTGAAATGTATCACATAAATCGTAGCTTATTTAATGGATGAATTAAATG GCAAAATCGGTTCATGCCATGTTTTCATGTAATACATATTTATTTATTTAATTAATTATT TATTTAATTATTTATTTATTTACTTACTTCTTCCAAGTGTTTCTTTTACATGCCATAATA ATGTTTAGTAAACCCTTTTTGTACAATCATTATAAATAAATATAATTACTTAAAATGGAG TATTTACCAGATAAAAAATTAGATAGGCAATTGGATAATATCTCAATCAATTTCATGGAA TGTAGACATTAAAGTTACTTACCCTAATTGTTGAATGTACACGCCTAGCATTCTATAGCT TTGAAAAATAATACCTGAACAAAGTCACAACTTATTTTACATGCTTCCATCAAATAGTTA GGGCGTGTGGTCTAGTGGTATGATTCTCGCTTTGGGCGAACATGGATAAAATCCGTGTGA ACAATCACAAGCATGCGAGAGGCCCTGGGTTCAATTCCCAGCTCGCCCCAATTTTTTTGC CACATCTTTTTTTTTCTTTTTAATACCCTTGAAAATCTATGTAACTATAATCATTTTAAA TTGAGCGATGAGATGAGCATAAATTAATTAAACAAATTTGTTGTCGAATATTATTTTATC TGTTGGTGTGGACGATAGGTTGATAATCAGCATAATTTTCAGTCCTAAATAGTTGACGGG TTTTCTCAGTACAAACTAGGAACCACTTATAAGTTAGGAGATGGGAAATGAGGAAAGTAG GATCAATGAAGGGTTAGACAACCTTGGTGTTAACGTCCAGTCCCAAAGTTCATTAGAGAA ACAGATTGAAAATGATGTTCAAAACTATACGATCCAACAACAGATAGAGCAAGAAGAGAA GCGTCTTGAGAGAGCCAAAAATGCACTTAACAAGTGCTTAAAGAAAAAGAAATTACTTGA ACGAAGACTTAAGCTAACTACTAGAATATCTGTCAAAGCCAAACTTCGAGAAGAAATTGC TTATCTTGAAGAGAATGAGGAGTATACACTAAGACAAGACATACAAGATGTCAAACAACG GCTAAAATCCAATCTCAATTCTCTTAATAGTGATAGTCAAAAGACAGAAACTGATCGACG ACCTGATGAATCAGAGAAAGATTATTTAGTTAGGATAGGTAAGATAACTGCTTTTGGCTC TTCCAATAAGTTTATTATTGATAATGAGGACTACGCCAATGATTCCTATCCAGCTACAAA AATCAAAAAGGAGGAAGATCTTGAAGCTTTGGCAGCTGTTCAAATGACGGAGAATCTTGA CGATGAAGAGCATATCTCAAATAGCTTTGATAATAATGATAATTTTGATGACACGTATGT TGATGATGATGAATATGTTAATACTGATGATACTAGTAAGGATGATGAGATCTCAGTCCC TGATACCAGATTCGCTCACGGACAAACGCTGGATGATGGAGACGAACTGATATATCAAAA AAGACTACGTAAATGGATTAAACATAGATCATCCAAAAGGACACTTGACAAACACGAACA TCTTCCAGAATGGCAAAAACCACATCCCGAAATCCCTGATGCAAAGCTTAACAATGAGTT CAAGATTCCTGGTGAAATATTCTCTCTCCTTTTCAATTACCAAAAAACAGGTGTACAGTG GCTTTATGAGCTTTTTCAACAGAGAAGGGGTGGTATAATTGGTGATGAAATGGGGCTAGG AAAAACTATTCAAGTAACAGCATTCTTAGCAGCATTACATCATTCTAATCTCCTTTCGGG ACCTGTTTTGATTGTTTGCCCGGCAACTGTGATGAAACAATGGTGTAACGAAATTCACCA ATGGTGGCCCCCATTTAGAGCAGTTATATTACATTCTATTGGGGCGGGTATGAATGATAA AAGTAACTTGACAGAAGATGAAATCGAAAACATGATAATTAAATCAGAACTTGAAAACAC AGACTTTCATGATTATGAAAATGCCTCAAAATTGAAAAGTAAGGTAGAAACTGGCATGCA TATGCAGAATCTTATATCAAAAGTTGTTGCAGATGGACATATCATTATTACAACTTATGT TGGACTCCGTATACATTCTGACAAATTATTAAATGTGAACTGGTCATATTGCGTTCTTGA TGAAGGTCACAAAATCAGAAATCCGGATTCTGAAATATCTCTGACTTGTAAAAAACTGAA GTGTAAAAACAGAATTATTCTTTCTGGTACACCCATTCAAAACAATCTTGTTGAATTATG GTCATTATTTGATTTTATCTATCCAGGAAGGTTAGGTACTTTACCCGTCTTTCAGCAGCA ATTTGTACAACCTATTAATATGGGTGGTTATGCTAATGCAACAAATACACAGGTTCAAAC TGGATACCGTTGTGCTGTTGCTCTAAGAGATCTTATATCACCATATCTTTTAAGAAGAGT CAAAGCTGATGTGGCTAAAGATTTACCTAAAAAGAAGGAAATGGTTTTATTTTGCAAACT GACAGAATTTCAAAGACGAAAGTACCTAGAATTTTTAAGTTCTGACGAATTAAGTCAAAT CAAAGGAGGTAAAAGACATGTGCTTTATGGTATCGATATTCTAAGAAAAATCTGTAATCA CCCAGATCTCTTGGACCGTGATTATATAAAGAATACTTCGGGATATGGTGACCCTAAGCG GTCAGGCAAAATGCAGGTTGTCAAACAATTGCTTAAGTTATGGAAGAGCGAGGGCCATAA AACGCTGTTATTTACGCAATCTAGGCAAATGCTAGATATCTTGGAAGAGTTCATAAAGTT CAAAGAACCAGAGCTGTCTGACATACGATATTTAAGAATGGATGGTACAACTAGTATTCA GGTAAGACAAACTCTAGTAGATAGGTTTAATAATGAGTCGTATGATGTTTTCCTGCTAAC TACTCGGGTAGGTGGTTTGGGTGTTAATTTAACGGGGGCCAATAGAATTATCATATATGA TCCTGATTGGAATCCTTCGACTGATTTACAGGCAAGAGAAAGAGCCTGGAGAATAGGACA GAAACGAGAAGTATCAATATATAGATTAATGATTTCCGGAACCATAGAAGAAAAAATTTA TCATCGGCAAATTTTTAAACAATTTCTAATGAATAAAGTTTTATCGGATCCAAAGCAGAA AAGATTCTTCAAAACTAAAGAACTTCAAGATCTATTTAGCTTGGGAGGTGAACAAGGTTA TTCAACTGAAACGTTAAATGAGGAGGTTGAAAAACATACTAAAAAATTAAAAGACGAAAG TACTAAAGATAGTGATGATTTAGATCAAGTCACCAACTTGGATGGTGTATCTAAGTTAGA AAGTTTTTATGATGGTAAAGAAGTCTCAGAATCCAATAAAGAAGATGACGAGAGGCTTAT GGAGGGTCTGCTAGGTGAAAAGAGTCTTGAAAATATTGCTACGCATGAGCAAATGATAAA ATCCCATTCGGTAGGTTCATCAAAAATTGTTAAAAGAGAAGCTGAGAGAATAGCAAATCA AGCGTTGGAAGCTTTAAGAATTTCAAGAAAAGAGACCAAGAAGTATGATATTGGTACTCC AACTTGGACAGGAAAGTTTGGTACAGCAGGTAAAGTAAACAAGCCCAATTTGAAAAAAAA TATTAAGAAAGGTACCGGATCTGCCAGTATTTTATCAAATATCAGGAAAGCGAACACTCA AGTAAAGAAAAGTCCGACCGACTCTGATACTACAAATGCAGATACGAATACAAACAAAGA GAAACTGCTCTCCATTATTAACTTTCTAAAAAAACAGGAGAACTTTGAAGCCTCTTCTCG GGATATATTAAATAACCTTGGCGTCCACATTAATGATGAGGAAGATCTAATCAAAACTAG AGCTCTACTAAAAAGCATAGGTAACTTTAGCAATAACAAGAAGGTCTGGGTCTTGAAAAG TGAATTTCAACCATAGTCAATAATTTGATAGTTGATGCCTATAGAACAAAGGTTACAATG TAAGGAATATTATCATATAATACATTTCTATAAAATTACTCGTAAATCTAATTTCTATTT AAAACCAAAGCCTTCAGATTCTGTAACTGCCCATTTCAACTTCGATTCTAATTTTTCTTT CGATCGATATTGCCATAAACAGAGTTCATTAAAACAGGTATGAGCTATAGGTAGTTTGTC AGAGTCAGATGAACCCAAAAGACTCAATTTGAAAGGCAGGGTAGACATACCCGTTGCTGG AACACCATCAGAACCA
>CAGL0I01694g.cds ATGGGAAATGAGGAAAGTAGGATCAATGAAGGGTTAGACAACCTTGGTGTTAACGTCCAG TCCCAAAGTTCATTAGAGAAACAGATTGAAAATGATGTTCAAAACTATACGATCCAACAA CAGATAGAGCAAGAAGAGAAGCGTCTTGAGAGAGCCAAAAATGCACTTAACAAGTGCTTA AAGAAAAAGAAATTACTTGAACGAAGACTTAAGCTAACTACTAGAATATCTGTCAAAGCC AAACTTCGAGAAGAAATTGCTTATCTTGAAGAGAATGAGGAGTATACACTAAGACAAGAC ATACAAGATGTCAAACAACGGCTAAAATCCAATCTCAATTCTCTTAATAGTGATAGTCAA AAGACAGAAACTGATCGACGACCTGATGAATCAGAGAAAGATTATTTAGTTAGGATAGGT AAGATAACTGCTTTTGGCTCTTCCAATAAGTTTATTATTGATAATGAGGACTACGCCAAT GATTCCTATCCAGCTACAAAAATCAAAAAGGAGGAAGATCTTGAAGCTTTGGCAGCTGTT CAAATGACGGAGAATCTTGACGATGAAGAGCATATCTCAAATAGCTTTGATAATAATGAT AATTTTGATGACACGTATGTTGATGATGATGAATATGTTAATACTGATGATACTAGTAAG GATGATGAGATCTCAGTCCCTGATACCAGATTCGCTCACGGACAAACGCTGGATGATGGA GACGAACTGATATATCAAAAAAGACTACGTAAATGGATTAAACATAGATCATCCAAAAGG ACACTTGACAAACACGAACATCTTCCAGAATGGCAAAAACCACATCCCGAAATCCCTGAT GCAAAGCTTAACAATGAGTTCAAGATTCCTGGTGAAATATTCTCTCTCCTTTTCAATTAC CAAAAAACAGGTGTACAGTGGCTTTATGAGCTTTTTCAACAGAGAAGGGGTGGTATAATT GGTGATGAAATGGGGCTAGGAAAAACTATTCAAGTAACAGCATTCTTAGCAGCATTACAT CATTCTAATCTCCTTTCGGGACCTGTTTTGATTGTTTGCCCGGCAACTGTGATGAAACAA TGGTGTAACGAAATTCACCAATGGTGGCCCCCATTTAGAGCAGTTATATTACATTCTATT GGGGCGGGTATGAATGATAAAAGTAACTTGACAGAAGATGAAATCGAAAACATGATAATT AAATCAGAACTTGAAAACACAGACTTTCATGATTATGAAAATGCCTCAAAATTGAAAAGT AAGGTAGAAACTGGCATGCATATGCAGAATCTTATATCAAAAGTTGTTGCAGATGGACAT ATCATTATTACAACTTATGTTGGACTCCGTATACATTCTGACAAATTATTAAATGTGAAC TGGTCATATTGCGTTCTTGATGAAGGTCACAAAATCAGAAATCCGGATTCTGAAATATCT CTGACTTGTAAAAAACTGAAGTGTAAAAACAGAATTATTCTTTCTGGTACACCCATTCAA AACAATCTTGTTGAATTATGGTCATTATTTGATTTTATCTATCCAGGAAGGTTAGGTACT TTACCCGTCTTTCAGCAGCAATTTGTACAACCTATTAATATGGGTGGTTATGCTAATGCA ACAAATACACAGGTTCAAACTGGATACCGTTGTGCTGTTGCTCTAAGAGATCTTATATCA CCATATCTTTTAAGAAGAGTCAAAGCTGATGTGGCTAAAGATTTACCTAAAAAGAAGGAA ATGGTTTTATTTTGCAAACTGACAGAATTTCAAAGACGAAAGTACCTAGAATTTTTAAGT TCTGACGAATTAAGTCAAATCAAAGGAGGTAAAAGACATGTGCTTTATGGTATCGATATT CTAAGAAAAATCTGTAATCACCCAGATCTCTTGGACCGTGATTATATAAAGAATACTTCG GGATATGGTGACCCTAAGCGGTCAGGCAAAATGCAGGTTGTCAAACAATTGCTTAAGTTA TGGAAGAGCGAGGGCCATAAAACGCTGTTATTTACGCAATCTAGGCAAATGCTAGATATC TTGGAAGAGTTCATAAAGTTCAAAGAACCAGAGCTGTCTGACATACGATATTTAAGAATG GATGGTACAACTAGTATTCAGGTAAGACAAACTCTAGTAGATAGGTTTAATAATGAGTCG TATGATGTTTTCCTGCTAACTACTCGGGTAGGTGGTTTGGGTGTTAATTTAACGGGGGCC AATAGAATTATCATATATGATCCTGATTGGAATCCTTCGACTGATTTACAGGCAAGAGAA AGAGCCTGGAGAATAGGACAGAAACGAGAAGTATCAATATATAGATTAATGATTTCCGGA ACCATAGAAGAAAAAATTTATCATCGGCAAATTTTTAAACAATTTCTAATGAATAAAGTT TTATCGGATCCAAAGCAGAAAAGATTCTTCAAAACTAAAGAACTTCAAGATCTATTTAGC TTGGGAGGTGAACAAGGTTATTCAACTGAAACGTTAAATGAGGAGGTTGAAAAACATACT AAAAAATTAAAAGACGAAAGTACTAAAGATAGTGATGATTTAGATCAAGTCACCAACTTG GATGGTGTATCTAAGTTAGAAAGTTTTTATGATGGTAAAGAAGTCTCAGAATCCAATAAA GAAGATGACGAGAGGCTTATGGAGGGTCTGCTAGGTGAAAAGAGTCTTGAAAATATTGCT ACGCATGAGCAAATGATAAAATCCCATTCGGTAGGTTCATCAAAAATTGTTAAAAGAGAA GCTGAGAGAATAGCAAATCAAGCGTTGGAAGCTTTAAGAATTTCAAGAAAAGAGACCAAG AAGTATGATATTGGTACTCCAACTTGGACAGGAAAGTTTGGTACAGCAGGTAAAGTAAAC AAGCCCAATTTGAAAAAAAATATTAAGAAAGGTACCGGATCTGCCAGTATTTTATCAAAT ATCAGGAAAGCGAACACTCAAGTAAAGAAAAGTCCGACCGACTCTGATACTACAAATGCA GATACGAATACAAACAAAGAGAAACTGCTCTCCATTATTAACTTTCTAAAAAAACAGGAG AACTTTGAAGCCTCTTCTCGGGATATATTAAATAACCTTGGCGTCCACATTAATGATGAG GAAGATCTAATCAAAACTAGAGCTCTACTAAAAAGCATAGGTAACTTTAGCAATAACAAG AAGGTCTGGGTCTTGAAAAGTGAATTTCAACCATAG
>CAGL0I01694g.aa MGNEESRINEGLDNLGVNVQSQSSLEKQIENDVQNYTIQQQIEQEEKRLERAKNALNKCL KKKKLLERRLKLTTRISVKAKLREEIAYLEENEEYTLRQDIQDVKQRLKSNLNSLNSDSQ KTETDRRPDESEKDYLVRIGKITAFGSSNKFIIDNEDYANDSYPATKIKKEEDLEALAAV QMTENLDDEEHISNSFDNNDNFDDTYVDDDEYVNTDDTSKDDEISVPDTRFAHGQTLDDG DELIYQKRLRKWIKHRSSKRTLDKHEHLPEWQKPHPEIPDAKLNNEFKIPGEIFSLLFNY QKTGVQWLYELFQQRRGGIIGDEMGLGKTIQVTAFLAALHHSNLLSGPVLIVCPATVMKQ WCNEIHQWWPPFRAVILHSIGAGMNDKSNLTEDEIENMIIKSELENTDFHDYENASKLKS KVETGMHMQNLISKVVADGHIIITTYVGLRIHSDKLLNVNWSYCVLDEGHKIRNPDSEIS LTCKKLKCKNRIILSGTPIQNNLVELWSLFDFIYPGRLGTLPVFQQQFVQPINMGGYANA TNTQVQTGYRCAVALRDLISPYLLRRVKADVAKDLPKKKEMVLFCKLTEFQRRKYLEFLS SDELSQIKGGKRHVLYGIDILRKICNHPDLLDRDYIKNTSGYGDPKRSGKMQVVKQLLKL WKSEGHKTLLFTQSRQMLDILEEFIKFKEPELSDIRYLRMDGTTSIQVRQTLVDRFNNES YDVFLLTTRVGGLGVNLTGANRIIIYDPDWNPSTDLQARERAWRIGQKREVSIYRLMISG TIEEKIYHRQIFKQFLMNKVLSDPKQKRFFKTKELQDLFSLGGEQGYSTETLNEEVEKHT KKLKDESTKDSDDLDQVTNLDGVSKLESFYDGKEVSESNKEDDERLMEGLLGEKSLENIA THEQMIKSHSVGSSKIVKREAERIANQALEALRISRKETKKYDIGTPTWTGKFGTAGKVN KPNLKKNIKKGTGSASILSNIRKANTQVKKSPTDSDTTNADTNTNKEKLLSIINFLKKQE NFEASSRDILNNLGVHINDEEDLIKTRALLKSIGNFSNNKKVWVLKSEFQP*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/CAGL/CAGL0I01694g