HomeCAGL0H04983g
highly similar to uniprot|P41940 Saccharomyces cerevisiae YDL055c PSA1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from GTP and mannose-1-phosphate in cell wall biosynthesis
Element type: CDS
Element length: 1086 nucleotides,
on sense strand of
Cagl0H: 477828..478913.
Other names:
CAGL-CDS3067.1
CAGL-IPF4457
Coding sequence: 362 codons.
Element length: 1086 nucleotides,
on sense strand of
Cagl0H: 477828..478913.
Other names:
CAGL-CDS3067.1
CAGL-IPF4457
Coding sequence: 362 codons.
Database cross references:
EMBL: CR380954
GeneID: 2888449
HOGENOM: Q6FRY2
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR380954
GeneID: 2888449
HOGENOM: Q6FRY2
Homologs and Orthologs
Homologs in protein families: GL3C0213 GL3C0213.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein CAGL0H04983p 
highly similar to uniprot|P41940 Saccharomyces cerevisiae YDL055c PSA1 mannose-1-phosphate guanyltransferase
Protein domain map
Database cross references:
InterPro: IPR001451
InterPro: IPR005835
KEGG: cgr:CAGL0H04983g
PROSITE: PS00101
Pfam: PF00132
Pfam: PF00483
RefSeq: XP_447012.1
UniProtKB/Swiss-Prot: Q6FRY2
UniprotKB: MPG12_CANGA
InterPro: IPR001451
InterPro: IPR005835
KEGG: cgr:CAGL0H04983g
PROSITE: PS00101
Pfam: PF00132
Pfam: PF00483
RefSeq: XP_447012.1
UniProtKB/Swiss-Prot: Q6FRY2
UniprotKB: MPG12_CANGA
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>CAGL0H04983g.nt GAGGCAAAGAGTTCTAAAAAAATTAAATATACCAGCACCCTCTCAAGGGACTTATAGAAG CACTACTTGGAGGTAAATTAAATTGCCTGTAATCAATTAGTTTACCCTCTCTCCAACTTA TTCTGAGAAGGAGGAATAAATTAGTTTGGTTCAGTCTTACCCACACCCACCGAAGGGCAA AAAGTTCTTTAACCGTATTGAAGTAAATGATCAGAAGTAGTGCATCTTCATTAAAAAAAC CTTCCTACTACCGATTCTTGGTAAAATGAAGCAAGGGTTTTTGTCTTGGTCATAAGACAA TGGATTGATAGAGGCAAGTGCTTGTACCTTTCTATATTTTCGAAATCATTTCTTACATCG CACTATATGTATTGCAGTTATTTGTGCAGCCAGTGTGGTCCTTCACAGTATTCTAAATAT TTGTATGCTATTGTCAAAGGAACCTTGAAAACGAAAAAAATTTGGCTGCTACTTTTGTAG GTACTGCCAAGGCTTGTATTGCAAACTTCATTTCTAAATATAACAAAAAGAGAAACACCG TATGGATTGCATGCAACAATACTCTAGGGTTTTTCGTTCCTGATAAAAGTGGCATTGTCA AATGATTCTCTTGATGATTCAATTTACTAAGAAGCTGGTATTTACATAACAGACTGAGCA CATTTTTTCATTAATGTAGTGGAAATAAGCCAAGTTCGAGACCTTTGTTGCTTTGGTATG GTGATAGTAATACCTGACCCCACTCTTTGCTACAAATAACAATTCTTTCTTGAGACTCGA GAATACATATATAAATGTACACTTGGAAGTAATATTTCAACATTCATTCACTTATAAATT ATCTGTATTGCTAATATTTTTAGTTGTGTTCGCTTTTATAAACGCTATCAACCAATTAAG GCACTCTTATCTGACATACAATATTAGATAAGTAGTATTTATTACTAAGCCATCCAGCTA CTCTCTATTTCAACAGAAATTCAAATAAAAAGTCACTATTATGAAAGGTTTAATTCTAGT TGGTGGATATGGTACTAGATTGAGGCCATTGACTCTATCTGTTCCAAAACCCCTGGTCGA ATTCTGTAACAGGCCAATGATTTTGCATCAAATTGAGGCTCTAGCTGAAGCTGGTGTAAC TGATATTGTTTTGGCTGTTAATTACAGACCAGAAGTAATGGTTGACACGCTGAAGAAATA TGAGAAGGAATATGGCGTGAACATCACCTTTTCTGTTGAGACAGAACCTCTAGGAACCGC AGGTCCATTAAAATTGGCAGAGAAAATTCTGAAAAAGGACAACTCTCCATTTTTTGTCCT CAACTCTGATGTAATCTGCGAGTACCCATTCAAAGAACTTGCCGAATTCCATAAATCACA TGGCGGTAAAGGAACAATTGTTGCTACAAAGGTCGATGAACCTTCCAAATATGGTGTTAT TGTTCATGACTTGGGTACTCCAAATTTGATTGATAGATTTGTTGAAAAACCAAAGGAATT CGTTGGTAACAGAATTAATGCTGGTTTATATATTTTAAACCCAGAGGTCATTGATTTGAT AGAGATGAAACCAACTTCCATAGAAACAGAGACTTTCCCAAAGTTGGTGAATGAAAAGTC CCTGTACACTTTTGATTTAGAGGGTTTTTGGATGGATGTCGGTCAACCAAAGGATTTCCT GGCTGGTACAGGACTCTATCTACAATCTTTGTCAAGAAGACATCCAGAGAAATTATCGAC CGGAAGCAATATTGTCAGCAACGCCATCATTGACCCAACGGCCAAAATATCTCCTGATGC CAAAATTGGTCCAGATGTTGTAATTGGTCCAAATTGTGTCATTGGTTCAGGTGTAAGAAT TGTTAGATCAGTACTTCTAAAGAATTGTGTGGTCAAGGAAAATTCCTTAATCAAAGACAC TATTGTGGGCTGGGATTCTACCATTGGCAGATGGTGCCGTCTAGAAGGTTGTGCAGTACT TGGTCATGATGTTGCAGTCAAGGATGAAGTTTATGTGAATGGTGCTAAGGTTTTACCTCA CAAGTCGATTTCTGCCAACGTTCCCTCCGAAGCTATTATTATGTAAAATCTCAATGGCGC TTCTAGGTGTCTTTTCGAATTAGAATTTCTTTGTTTCACATGGACAAAAAGTCAAGAAAT AGCAATACGCAACATAGTATCTATTACATCACTTAATTAATCACCAAATTTAATACTTGT AGTTCATATGTATGCTATAATAAAACCGAAACACCTTTCGATTTGCTCAACCATTGTTAT CATGGCGTATCATTGGGGGAAAAAATAGTCAAGCAATACATTGTTGAATTGATTTACGAA TGTTGTTAAATTTATCCGAGAATCTGACCCCTCACCCTAAAAAAGT
Coding sequence
>CAGL0H04983g.cds ATGAAAGGTTTAATTCTAGTTGGTGGATATGGTACTAGATTGAGGCCATTGACTCTATCT GTTCCAAAACCCCTGGTCGAATTCTGTAACAGGCCAATGATTTTGCATCAAATTGAGGCT CTAGCTGAAGCTGGTGTAACTGATATTGTTTTGGCTGTTAATTACAGACCAGAAGTAATG GTTGACACGCTGAAGAAATATGAGAAGGAATATGGCGTGAACATCACCTTTTCTGTTGAG ACAGAACCTCTAGGAACCGCAGGTCCATTAAAATTGGCAGAGAAAATTCTGAAAAAGGAC AACTCTCCATTTTTTGTCCTCAACTCTGATGTAATCTGCGAGTACCCATTCAAAGAACTT GCCGAATTCCATAAATCACATGGCGGTAAAGGAACAATTGTTGCTACAAAGGTCGATGAA CCTTCCAAATATGGTGTTATTGTTCATGACTTGGGTACTCCAAATTTGATTGATAGATTT GTTGAAAAACCAAAGGAATTCGTTGGTAACAGAATTAATGCTGGTTTATATATTTTAAAC CCAGAGGTCATTGATTTGATAGAGATGAAACCAACTTCCATAGAAACAGAGACTTTCCCA AAGTTGGTGAATGAAAAGTCCCTGTACACTTTTGATTTAGAGGGTTTTTGGATGGATGTC GGTCAACCAAAGGATTTCCTGGCTGGTACAGGACTCTATCTACAATCTTTGTCAAGAAGA CATCCAGAGAAATTATCGACCGGAAGCAATATTGTCAGCAACGCCATCATTGACCCAACG GCCAAAATATCTCCTGATGCCAAAATTGGTCCAGATGTTGTAATTGGTCCAAATTGTGTC ATTGGTTCAGGTGTAAGAATTGTTAGATCAGTACTTCTAAAGAATTGTGTGGTCAAGGAA AATTCCTTAATCAAAGACACTATTGTGGGCTGGGATTCTACCATTGGCAGATGGTGCCGT CTAGAAGGTTGTGCAGTACTTGGTCATGATGTTGCAGTCAAGGATGAAGTTTATGTGAAT GGTGCTAAGGTTTTACCTCACAAGTCGATTTCTGCCAACGTTCCCTCCGAAGCTATTATT ATGTAA
Predicted translation product
>CAGL0H04983g.aa MKGLILVGGYGTRLRPLTLSVPKPLVEFCNRPMILHQIEALAEAGVTDIVLAVNYRPEVM VDTLKKYEKEYGVNITFSVETEPLGTAGPLKLAEKILKKDNSPFFVLNSDVICEYPFKEL AEFHKSHGGKGTIVATKVDEPSKYGVIVHDLGTPNLIDRFVEKPKEFVGNRINAGLYILN PEVIDLIEMKPTSIETETFPKLVNEKSLYTFDLEGFWMDVGQPKDFLAGTGLYLQSLSRR HPEKLSTGSNIVSNAIIDPTAKISPDAKIGPDVVIGPNCVIGSGVRIVRSVLLKNCVVKE NSLIKDTIVGWDSTIGRWCRLEGCAVLGHDVAVKDEVYVNGAKVLPHKSISANVPSEAII M*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/CAGL/CAGL0H04983g