HomeCAGL0H04125g
highly similar to uniprot|P54783 Saccharomyces cerevisiae YML086c ALO1 D-Arabinono-1,4-lactone oxidase, catalyzes the final step in biosynthesis of D-erythroascorbic acid, which is protective against oxidative stress
Element type: CDS
Element length: 1578 nucleotides,
on anti-sense strand of
Cagl0H: complement(390841..392418).
Other names:
CAGL-CDS1932.1
CAGL-IPF1871
Coding sequence: 526 codons.
Element length: 1578 nucleotides,
on anti-sense strand of
Cagl0H: complement(390841..392418).
Other names:
CAGL-CDS1932.1
CAGL-IPF1871
Coding sequence: 526 codons.
Database cross references:
EMBL: CR380954
GeneID: 2888523
HOGENOM: Q6FS20
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR380954
GeneID: 2888523
HOGENOM: Q6FS20
Homologs and Orthologs
Homologs in protein families: GL3R1598 GL3R1598.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein CAGL0H04125p 
highly similar to uniprot|P54783 Saccharomyces cerevisiae YML086c ALO D-arabinono-1 4-lactone oxidase
Protein domain map
Sequence data
Nucleotide sequence
>CAGL0H04125g.nt AGTCAGATGCAGCCGTTTACGTAATTGAGGCACCTGTCTTACGTGGTCGGCATCTAACCC ACACGCTATAGTCTCCAAGCTAGGGATCGCTTCCAGTAGCTTGTAGACGTGCATGGCACT GACACTGGTCGGCACAACGAGCCATTTCAATTGAGTCCATTTGCCCTTCAAGTTCTTCAG CCGCGTGATCCAGTATGAAAGTATAAGGTCACCTACGGGGCACATCACGGATAACCCATG AAGACACTGTAGATCAACTAATTGACGCATATCATCGACGTCTCTACATGCATGCACTTG TAGATCAAGTGGTAGCTTCGTTGCGGATCCGCCAAGTAGATGACTCAATTCAACTACGCT GACATCGCGGATCGAGAGCTTTTGTGAGAAGTGCTGTGGCATATCTCGAGCCTCCAATTG TAAGAACAATAAATACAGCTCCAAGGTATCATTGCCCATGTTCACCACATAGCGATACAC TTCCCACAGCAATTGGTGCGGTACTTGGGCTAGAACTTCCTTGTGACCGAAACGTGACCG CGAAACCCATCCAGCTATCGTGTAGCTGCAACGACCAGTCAGCGTTTCATTCATATATAG TCCTTACAAAAATAGCCTCCCTTCGAGACATTCTAAATTACAGGAAAATATAAGATTTAA TAATACTCTGCCACTTAGCCAATTGATTATATAATTTCGTGGATTTCTTTAATATATGGA CTATGTTCAACCTCATCGCATCACGAAGAACTGAAAAATTTCTGAAAATTTGGCAGCAAA GGGAGAAGGGTTAACCCGAAATTGAGTCAAATTGTCATATAAAGCAAGGATACGGGGGGG CATATTAACTCCTTGTTTTTATTGTTCAAACTTATATAAATCATATTTGTTTGCTTTTGT TATTATCCCAAAGATAATCTCTTTGCAAGATCTAGCAATTGGAGTACTGGTATTTTTTTT AAGTAAAGAGTTTCTCTAAACCAAAAAAAAGGACAATAACATGGATTTGAAAACATTTGG TGGTCGGCGGAACTTTGTGTTTCGCAATTGGGCTGGTATCTATTCCTCAAGACCAGAATG GTACTTTCAGCCTTCCTCAGTCGACGAAGTTGTCGAAATTGTCAAAGCTGCTAAACTAAA GAACAAGACTATTGTTACAGTTGGCTCAGGCCACTCCCCTAGTAACATGTGTGTTACCGA CGAATGGATGATGAACTTGGACAAGATGAACAAGTTACTAGATTTTGTGGAAAACGAGGA TAAGACATACGCAGACGTTACTATTCAAGGTGGTACTAGGTTGTATAAGATCCACAAAAT ATTAAGGGAAAAGGGATACGCCATGCAAAGTTTGGGGTCCATTTCTGAACAAAGTATTGG TGGTATTATCTCTACTGGTACTCATGGTTCGTCTCCATTCCATGGTCTGGTATCTTCTAC TATTGTCAACTTGACTGTTGTCAATGGTAAAGGTGAAGTATTATTTTTAGACGAAAAGTC TAACCCTGAAGTTTTCAGGGCTGCTACTTTGTCGCTTGGTAAGATTGGTATTATTGTGGG TGCAACTGTTCGTGTTGTTCCAGCTTTCAACATTAAATCAACCCAAGAAGTTATCAAATT TGAAACTCTTTTGGAAAAATGGGACTCTCTCTGGACTTCTTCAGAGTTTATCAGAATTTG GTGGTACCCATATACACGTAAGTGTATCCTTTGGAGAGGTGTAAAGACTAATGAACCACA GACTAAGTCAAGATATTCGTGGTGGGGTTCTACTCTAGGTAGATTTTTCTACCAGACTTT GTTGTTCATATCTACCAAGATTTACCCACCTTTGACTCCATATGTTGAAAGATTTGTCTT CAGAAGACAATATGGTGAAGTTGAAACCCTAGGTAAAGGTGATGTGGCAATTGAGGATTC TGTTACTGGGTTCAACATGGACTGTTTGTTTTCTCAGTTCGTTGATGAATGGGGTTGTCC AATGGACAATGGTTTAGAAGTCTTGCGTTCTCTTGACCACTCAATTGCTCAAGCCGCTGC TAACAAGGATTTCTATGTACATGTCCCAGTTGAGGTTCGTTGTGCAAACACAACTTTGCC AAAGGAACAACCTGAAACTTCTTTCCGTTCTAACACTAGTAGAGGTCCAGTTTACGGTAA CCTATTACGTCCTTACTTGGATAACACCCCATCTCAATGCTCTTATGCTCCTATCCACAG TGTTACTAATAGTCAGTTGACGCTATACATTAACGCGACAATTTACAGACCATTCCACAC CAATGCCCCAATTCACAAGTGGTTCACCTTGTTTGAAGATACAATGTCTGCTGCTGGCGG TAAACCACATTGGGCTAAGAACTTCTTGGGCTCTACCTCTTTTGCTCAAGGTCAAGTTAA GGCTGAAGGTCAATACCAAGACTATGAGATGAGAGGTATGGCTACAAGAGTCAAGGAATG GTATGGTTCAGACTTGGAAACCTTTAAGAAGGTTAGAAGAGAACAAGACCCAGACAACAT TTTCTTGGCAAACAAACAGTGGGCCTTGATCAACGGTATCATTGATGAAAACGAATAAAT TTTTGAATACATTCCTTATAGCTAAGATATATTAATGTTATGGTTTCGTTTAGAGTAAAT GTTCGATATATGTATTTCGAATTTTTCTCTAGATCTAGATGACTTGGTATATACTTGTCT CTATTCCTGTCCTATAGTTACAAATTTACTGTCTTTATTTTTCAATTATGTCTCAATATA CTAATAACTCTCAGTTTATTATTCGTGATATGATTTTATGTTTTTGGTCATTATTCTGAA CTTACGAAATAGTGAAAACCATAGCATAATAATAAACAAAAAAATACAAAAAATCAAA
Coding sequence
>CAGL0H04125g.cds ATGGATTTGAAAACATTTGGTGGTCGGCGGAACTTTGTGTTTCGCAATTGGGCTGGTATC TATTCCTCAAGACCAGAATGGTACTTTCAGCCTTCCTCAGTCGACGAAGTTGTCGAAATT GTCAAAGCTGCTAAACTAAAGAACAAGACTATTGTTACAGTTGGCTCAGGCCACTCCCCT AGTAACATGTGTGTTACCGACGAATGGATGATGAACTTGGACAAGATGAACAAGTTACTA GATTTTGTGGAAAACGAGGATAAGACATACGCAGACGTTACTATTCAAGGTGGTACTAGG TTGTATAAGATCCACAAAATATTAAGGGAAAAGGGATACGCCATGCAAAGTTTGGGGTCC ATTTCTGAACAAAGTATTGGTGGTATTATCTCTACTGGTACTCATGGTTCGTCTCCATTC CATGGTCTGGTATCTTCTACTATTGTCAACTTGACTGTTGTCAATGGTAAAGGTGAAGTA TTATTTTTAGACGAAAAGTCTAACCCTGAAGTTTTCAGGGCTGCTACTTTGTCGCTTGGT AAGATTGGTATTATTGTGGGTGCAACTGTTCGTGTTGTTCCAGCTTTCAACATTAAATCA ACCCAAGAAGTTATCAAATTTGAAACTCTTTTGGAAAAATGGGACTCTCTCTGGACTTCT TCAGAGTTTATCAGAATTTGGTGGTACCCATATACACGTAAGTGTATCCTTTGGAGAGGT GTAAAGACTAATGAACCACAGACTAAGTCAAGATATTCGTGGTGGGGTTCTACTCTAGGT AGATTTTTCTACCAGACTTTGTTGTTCATATCTACCAAGATTTACCCACCTTTGACTCCA TATGTTGAAAGATTTGTCTTCAGAAGACAATATGGTGAAGTTGAAACCCTAGGTAAAGGT GATGTGGCAATTGAGGATTCTGTTACTGGGTTCAACATGGACTGTTTGTTTTCTCAGTTC GTTGATGAATGGGGTTGTCCAATGGACAATGGTTTAGAAGTCTTGCGTTCTCTTGACCAC TCAATTGCTCAAGCCGCTGCTAACAAGGATTTCTATGTACATGTCCCAGTTGAGGTTCGT TGTGCAAACACAACTTTGCCAAAGGAACAACCTGAAACTTCTTTCCGTTCTAACACTAGT AGAGGTCCAGTTTACGGTAACCTATTACGTCCTTACTTGGATAACACCCCATCTCAATGC TCTTATGCTCCTATCCACAGTGTTACTAATAGTCAGTTGACGCTATACATTAACGCGACA ATTTACAGACCATTCCACACCAATGCCCCAATTCACAAGTGGTTCACCTTGTTTGAAGAT ACAATGTCTGCTGCTGGCGGTAAACCACATTGGGCTAAGAACTTCTTGGGCTCTACCTCT TTTGCTCAAGGTCAAGTTAAGGCTGAAGGTCAATACCAAGACTATGAGATGAGAGGTATG GCTACAAGAGTCAAGGAATGGTATGGTTCAGACTTGGAAACCTTTAAGAAGGTTAGAAGA GAACAAGACCCAGACAACATTTTCTTGGCAAACAAACAGTGGGCCTTGATCAACGGTATC ATTGATGAAAACGAATAA
Predicted translation product
>CAGL0H04125g.aa MDLKTFGGRRNFVFRNWAGIYSSRPEWYFQPSSVDEVVEIVKAAKLKNKTIVTVGSGHSP SNMCVTDEWMMNLDKMNKLLDFVENEDKTYADVTIQGGTRLYKIHKILREKGYAMQSLGS ISEQSIGGIISTGTHGSSPFHGLVSSTIVNLTVVNGKGEVLFLDEKSNPEVFRAATLSLG KIGIIVGATVRVVPAFNIKSTQEVIKFETLLEKWDSLWTSSEFIRIWWYPYTRKCILWRG VKTNEPQTKSRYSWWGSTLGRFFYQTLLFISTKIYPPLTPYVERFVFRRQYGEVETLGKG DVAIEDSVTGFNMDCLFSQFVDEWGCPMDNGLEVLRSLDHSIAQAAANKDFYVHVPVEVR CANTTLPKEQPETSFRSNTSRGPVYGNLLRPYLDNTPSQCSYAPIHSVTNSQLTLYINAT IYRPFHTNAPIHKWFTLFEDTMSAAGGKPHWAKNFLGSTSFAQGQVKAEGQYQDYEMRGM ATRVKEWYGSDLETFKKVRREQDPDNIFLANKQWALINGIIDENE*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/CAGL/CAGL0H04125p