CAGL0D01034g


(ohnolog of CAGL0H04983g), highly similar to uniprot|P41940 Saccharomyces cerevisiae YDL055c PSA1 mannose-1-phosphate guanyltransferase

Genomic environment map

Element type: CDS
Element length: 1086 nucleotides,
on anti-sense strand of
Cagl0D: complement(121908..122993).
Other names:
CAGL-CDS3064.1
CAGL-IPF2627
Coding sequence: 362 codons.
Database cross references:
EMBL: AB020570
EMBL: CR380950
GenomeReviews: CR380950_GR
HOGENOM: HBG688195

Computed results  

None available yet


Homologs and Orthologs

Homologs in protein family: GL3C0213
Orthologs: strict determination not possible; homologs must be refined manually
Ohnolog: CAGL0H04983g

Protein CAGL0D01034p  


(ohnolog of CAGL0H04983g), highly similar to uniprot|P41940 Saccharomyces cerevisiae YDL055c PSA1 mannose-1-phosphate guanyltransferase; RecName: Full=Mannose-1-phosphate guanyltransferase 1; EC=2.7.7.13; AltName: Full=ATP-mannose-1-phosphate guanylyltransferase 1; AltName: Full=GDP-mannose pyrophosphorylase 1;

Protein domain map

Protein length: 361 amino acids
Protein family: GL3C0213
Database cross references:
InterPro: IPR001451
InterPro: IPR005835
InterPro: IPR011004
InterPro: IPR018357
PROSITE: PS00101
Pfam: PF00132
Pfam: PF00483
UniProtKB/Swiss-Prot: Q9Y725
UniProtKB: MPG11_CANGA

Phylogeny  

PhylomeDB:CAGL0D01034g

Computed results for CAGL0D01034p  

Blastp Genolevures
Blastp Uniprot

Gene Ontology terms  


Sequence data  


Nucleotide sequence    

>CAGL0D01034g.nt
ATGAAGGGTTTAATTCTAGTTGGTGGTTACGGTACCAGATTGAGACCTTTGACTTTGACT
GTCCCAAAGCCATTGGTTGAGTTCGGTAACAGACCAATGATCTTGCACCAGATTGAAGCT
TTGGCCAACGCTGGTGTCACCGATATCGTCTTGGCTGTCAACTACAGACCAGAAGTCATG
GTTGAGACTTTGCAAAAGTACGAGAAGGAGTATGGTGTCAGCATCACTTTCTCCGTCGAA
ACCGAGCCATTGGGTACCGCTGGTCCATTGAAGTTGGCCGAGAAGGTTTTAAAGAAGGAC
AACTCTCCATTCTTCGTTCTAAACTCCGATGTCATCTGTGAATACCCATTCAAGGAATTG
GCTGACTTCCACAAGGCCCACGGTGGTAAGGGTACCATTGTCGCTACCAAGGTCGACGAA
CCATCCAAGTACGGTGTCATCGTCCATGACATTGCCACTCCAAACTTGATCGACAGATTC
GTCGAGAAGCCAAAGGAATTCGTTGGTAACAGAATCAACGCTGGTTTGTACATCTTGAAC
CCAGAAGTCATTGACTTGATCGAAATGAAGCCAACCTCTATCGAAACCGAGACTTTCCCA
ATCCTTGTTGAACAAAAGTCCTTGTACTCCTTCGACTTGGAAGGTTTCTGGATGGATGTC
GGTCAACCAAAGGATTTCTTGTCCGGTACCGTTCTATACTTGAACTCTGTCTCCAAGAAG
AACCCAGAAAAGTTGACCAAGGGTGACAACATTGTCGGTAACGTTATGGTTGACCCATCT
GCCAAGATTGCTGCCTCTGCTAAGGTCGGTCCAGATGTAGTTATCGGTCCAAACGTCACT
ATCGGTGAAGGTGTCAGAATCACCAGATCCGTTGTCCTTTCCGACTCCAGTATTCAAGAC
CACTCCCTAGTAAAGTCCACCATTGTCGGCTGGAAGTCTACTGTTGGTAAGTGGTGTCGT
TTGGAAGGTGTCACTGTTTTGGGTGACGACGTTGTTGTCAAGGATGAAGTTTACGTTAAC
GGTGGTAAGGTCTTGCCTCACAAGTCCATCTCTGCTAACGTTCCAAGTGAAGCCATTATT
ATGTAA

Coding sequence    

>CAGL0D01034g.cds
ATGAAGGGTTTAATTCTAGTTGGTGGTTACGGTACCAGATTGAGACCTTTGACTTTGACT
GTCCCAAAGCCATTGGTTGAGTTCGGTAACAGACCAATGATCTTGCACCAGATTGAAGCT
TTGGCCAACGCTGGTGTCACCGATATCGTCTTGGCTGTCAACTACAGACCAGAAGTCATG
GTTGAGACTTTGCAAAAGTACGAGAAGGAGTATGGTGTCAGCATCACTTTCTCCGTCGAA
ACCGAGCCATTGGGTACCGCTGGTCCATTGAAGTTGGCCGAGAAGGTTTTAAAGAAGGAC
AACTCTCCATTCTTCGTTCTAAACTCCGATGTCATCTGTGAATACCCATTCAAGGAATTG
GCTGACTTCCACAAGGCCCACGGTGGTAAGGGTACCATTGTCGCTACCAAGGTCGACGAA
CCATCCAAGTACGGTGTCATCGTCCATGACATTGCCACTCCAAACTTGATCGACAGATTC
GTCGAGAAGCCAAAGGAATTCGTTGGTAACAGAATCAACGCTGGTTTGTACATCTTGAAC
CCAGAAGTCATTGACTTGATCGAAATGAAGCCAACCTCTATCGAAACCGAGACTTTCCCA
ATCCTTGTTGAACAAAAGTCCTTGTACTCCTTCGACTTGGAAGGTTTCTGGATGGATGTC
GGTCAACCAAAGGATTTCTTGTCCGGTACCGTTCTATACTTGAACTCTGTCTCCAAGAAG
AACCCAGAAAAGTTGACCAAGGGTGACAACATTGTCGGTAACGTTATGGTTGACCCATCT
GCCAAGATTGCTGCCTCTGCTAAGGTCGGTCCAGATGTAGTTATCGGTCCAAACGTCACT
ATCGGTGAAGGTGTCAGAATCACCAGATCCGTTGTCCTTTCCGACTCCAGTATTCAAGAC
CACTCCCTAGTAAAGTCCACCATTGTCGGCTGGAAGTCTACTGTTGGTAAGTGGTGTCGT
TTGGAAGGTGTCACTGTTTTGGGTGACGACGTTGTTGTCAAGGATGAAGTTTACGTTAAC
GGTGGTAAGGTCTTGCCTCACAAGTCCATCTCTGCTAACGTTCCAAGTGAAGCCATTATT
ATGTAA

Predicted translation product    

>CAGL0D01034g.aa
MKGLILVGGYGTRLRPLTLTVPKPLVEFGNRPMILHQIEALANAGVTDIVLAVNYRPEVM
VETLQKYEKEYGVSITFSVETEPLGTAGPLKLAEKVLKKDNSPFFVLNSDVICEYPFKEL
ADFHKAHGGKGTIVATKVDEPSKYGVIVHDIATPNLIDRFVEKPKEFVGNRINAGLYILN
PEVIDLIEMKPTSIETETFPILVEQKSLYSFDLEGFWMDVGQPKDFLSGTVLYLNSVSKK
NPEKLTKGDNIVGNVMVDPSAKIAASAKVGPDVVIGPNVTIGEGVRITRSVVLSDSSIQD
HSLVKSTIVGWKSTVGKWCRLEGVTVLGDDVVVKDEVYVNGGKVLPHKSISANVPSEAII
M*



Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites