CAGL0C01683g


highly similar to uniprot|P38144 Saccharomyces cerevisiae YBR245c ISW1 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes

Genomic environment map

Element type: CDS
Element length: 3348 nucleotides,
on sense strand of
Cagl0C: 178695..182042.
Other names:
CAGL-CDS0301.1
CAGL-IPF7266
Coding sequence: 1116 codons.
Database cross references:
EMBL: CR380949
GeneID: 2886964
HOGENOM: Q6FWZ6

Computed results  

None available yet

Protein CAGL0C01683p  


highly similar to uniprot|P38144 Saccharomyces cerevisiae YBR245c ISW1 and highly similar to uniprot|Q08773 Saccharomyces cerevisiae YOR304w ISW2

Protein domain map

Protein length: 1115 amino acids
Protein family: GL3M4588
Database cross references:
InterPro: IPR000330
InterPro: IPR001005
InterPro: IPR001650
InterPro: IPR014001
InterPro: IPR014021
InterPro: IPR015194
InterPro: IPR015195
KEGG: cgr:CAGL0C01683g
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00176
Pfam: PF00271
Pfam: PF09110
Pfam: PF09111
RefSeq: XP_445248.1
SMART: SM00487
SMART: SM00490
SMART: SM00717
UniProtKB/TrEMBL: Q6FWZ6
UniprotKB: Q6FWZ6_CANGA

Computed results for CAGL0C01683p  

Blastp Genolevures
Blastp Uniprot

Gene Ontology terms  

GO:0043044 ATP-dependent chromatin remodeling
GO:0031491 nucleosome binding
GO:0016585 chromatin remodeling complex
GO:0005524 ATP binding
GO:0004386 helicase activity
GO:0003677 DNA binding

Sequence data  


Nucleotide sequence    

>CAGL0C01683g.nt
CTTGATGGCCACCACGCCTGCGTCATGTATCCTACTGTTGGACCAGATCAATTCCTTTGA
TCTTAGATCATGGGCCATGATAGTGGCATCGTCACCACCGGTGAAGACCACGTTCTCCAA
CGGATGGATTTTGCCAAACTCGGCAGTCCAGCACTGCAGGCTGTGTTGCTCATCGAATAC
CTGACTTTCGCATTCCAGCGCCCACTGTGGTTCACCTTGAACTTTAATTTCGATCTTTTC
CTGTTTTTGGTATGCTTTATACACATTATCAGTGGAGAAACCTATGTCCCCATACTCAAT
ATCGATGGTGCTGGTTTCACCAGTGGTAGCGGTGAGCAGCAACGTAGCGGGACTCAATGG
GGAGAAGTGCAAAGACGCAATTAGAGTCTCGGGATCAAACACTTGCAAATTAGACACACG
CTCCAGCGAGACCCCGTCATCCCTAACTATTCTCCACAACTCCACATTACCAGTGGAGTG
CGCAGTTGCGACCAGCGTATCATCAAAGGGACTCAGCTTCAAGTCCAGCACTGCTCCGTA
AGTCCTATAGCTGTGCAAGAGCTTCAATTCAGAGTCAAATACATCGACAGAACCAAACCT
GTACCCGGTGTCCTTGTCCAACTCATACGTACCAACTATGATATACTCCTCGTCGTATAT
CTGCAAGCAGCAGGGCGGGAACTCCGTCTTAACAGCACTCAATATCTTCGCCTCCATCTC
CAATAGCACTTCAGATAGCTAACTCTGCACCTGGGGAGTAACTCCACCAACAGCGACTAT
ACATTCCCCCCGCCCACTGGTCATAGCCTGGGCCATCTCATCGCAATCTTATAGCCCATC
GATTGGACAGACAGAACCCTAAACCCTAAACCCTAATTTTCATCAGATTGGTGGTTTTGT
GTGTTGAAACGCGTCGCGAAGTGAGTGAAGTGGCCTTGTGCGTGCTAGGGTGGGATCAGG
CAGCCCTAAACGCACAATTTTTCACTTTGCCAGGCGTTGGATGGGAAACTCTGGGACTAG
TGGTCTTGACGGGCCATATAATTGGAGAAAGCTGTTATGTGTGTCTAGGAAGTACTATTC
GATAAGCATCAAGGAATTGGCGAGAGGTACGATGAGTGATTTGACGGAGTACTGGGCGCG
GTTGAAGCCCTTGCAAGAGGACATGCCGTCCGCTGATTTGGAATCGAAGAAAGAGCGGTA
CTTGGTGAAGGATGCTGGCAAGCCCAAGTTCGATGTTGAGGCCACTACCAAACGGTTTGA
GCATTTATTGTCGCTGAGTGGGTTGTTTAGGCATTTCATTGAGGGTAAAGCTGCGAAGGA
TCCCAAGTTCAAGCAGGTCTTGGACATCCTCGACAAGCCTGGTAAGAAGGGCCAGAAGAA
AGGAGGCCACGAGGATGCCAGAAGGCGTAAGACCGAGAGAGAGGAGGACGCTGAGCTGTT
GAAAGAGGAGGAGGATGTTGAGGACGACGCGGATGACATAGAGTACCTGTTCAGGGAATC
GCCAGCTTATATCAATGGTCAGCTGAGAGATTACCAAGTTCAAGGTTTGAACTGGCTTGT
ATCCCTGGACAAGAATAGGATTGCGGGTATTCTAGCAGATGAAATGGGTCTGGGTAAGAC
TCTTCAAACTATCTCATTCTTGGGGTACTTACGTTACATAAAGAAGATTCCAGGCCCATT
TCTAGTCATTGCACCAAAATCCACTTTGAACAATTGGCTAAGAGAAATTAACAAATGGAC
ACCAGAGGTGAACGCATTCATTCTACAAGGTGACAAAGAAGAAAGAGCCCGCCTGATCCA
GGACAAGTTTATGGCTTGCGACTTCGACGTCGTGATCGCATCCTATGAAATCATCATCAG
AGAGAAGGCAGCGTTCCGTAAAATGAACTGGGAGTATATCATGATCGATGAAGCGCACAG
AATCAAAAACGAAGAATCAATGCTGTCACAAGTATTGAGGGAATTCCATTCAAAGAATCG
TTTGTTGATAACCGGTACTCCATTGCAAAATAATTTACATGAACTGTGGGCACTTCTAAA
TTTCCTGCTACCCGATATTTTCTCTGATTCTCAGGACTTCGACGAATGGTTCTCGAAGGA
GACTGACGAGGAGGATCAAGAGAAGATTGTCAAGCAACTACATACAGTTTTGCAACCGTT
CTTGTTGCGTCGTATTAAAAGTGACGTTGAAACATCTCTTCTACCTAAGAAAGAACTAAA
TGTTTATGTTGGTATGTCGCCAATGCAGAAGAAGTGGTACAGACAAATTTTGGAGAAGGA
TATAGATGCCGTTAATGCAGACAGCGGCAGCAAAGAATCAAAGACTAGATTGTTGAACAT
TGTTATGCAATTGCGTAAATGTTGTAACCATCCATATCTCTTCGATGGTGCTGAACCTGG
TCCACCATATACAACTGACGAGCACTTGGTGTATAATTCTGAGAAACTAAAGGTTCTTGA
TAAGTTGTTACGTAAGTTGAAAGAAGCAGGTTCTCGTGTTCTGATTTTCAGTCAAATGTC
CCGTGTTTTGGATATCCTTGAAGATTACTGTTATTTCAGAGAATATGAATACTGCCGTAT
TGATGGTTCCACTGCACATGAAGATAGAATTGAAGCCATCGATGAATATAACGCCCCTGA
CTCAAAGAAGTTCTTGTTTTTATTGACTACTCGTGCAGGTGGTCTAGGTATTAACTTAAC
GACTGCCGATGTTGTTGTCCTATTTGATTCTGATTGGAATCCACAAGCTGATTTGCAAGC
TATGGATAGAGCTCACCGTATCGGTCAAAAGAAGCAGGTGAGGGTGTTTAGATTTGTTAC
TGATAACTCTGTTGAAGAAAAGATTCTTGAGCGTGCTACTCAAAAACTAAGGCTAGACCA
GCTAGTTATTCAGCAAAACAGACCAACTAACAAGAAGAAAGAAAACAAGAATGACTCTAA
GGATGCCTTGTTGTCTATGATCCAACATGGTGCTGCTGATGTATTCAAGAGTAATACAAC
TAGTGAAAGAGGAACACCACAACCAGATGACGATAAAGGTGAAGATGTTGATTTGGATGA
GTTATTGGCCCAGTCTGAGAGTAAGACTCAATCACTTAACGCTAAATATGAATCCCTAGG
TTTAGATGATTTACAAAAATTCAACCAAGATTCTGCATATGAATGGAATGGTACTGATTT
CAAAAAGAAGGTTCAGAAAGATATCATTAGTCCTTTGTGGATTGAACCTACCAAACGTGA
AAGAAAGGAGAATTACTCTATTGATGGCTACTATAAGGATGTGCTAAACACTGGTAAGCA
TTCTACTCCATTGCAACCAAGAATGCCAAAACCTAAGGTTTTTTACTCTCATCAATTGCA
ACCTCCACAACTAAAGGTCATATACGAAAAAGAAAGAATGTGGACAGCAAAGAGAACTAA
TTATACACCAACGTTAGAGGATGTAAGAGCCACTTATGGAGAGATAGCGGATGAGGAAGA
GAAAAAGCAAAAGTTAGAACTATTGAAAGTATCAATAAGCAATGCAGAACCTTTGACTGA
AGAAGAAGAGCAATTAAAATCACAATGGGAAAACGAAGGTTTTACCAATTGGACTAAGAC
TGACTTTAGAAAGTTTATCACCGCTTGCGGTAAGTATGGCCGTAATTCCATACAAGCGAT
CACAATGGAGCTAGCGCCTGGTAAGACAGAAGAAGAAGTTCGCAGATATGCCACTGCATT
TTGGAGCAATCTTGAACGTATTGATGATTATGAAAAGTACCTGAAGATGATTGAAAATGA
GGAGGAGAAAGTAAAGCGTGTCAAACTCCAGCAGGAAGCTTTGCGTAGGAAATTGTCTCA
GTATAAGAATCCGTTCTTCGACTTGAAACTAAAACACCCACCTTCCACTAACAACAAGAG
AACATTTTCAGATGAGGAAGACAGGTACATACTGATAATGTTGTTCAAGTACGGTCTCGA
TAGAGAAAACGTTTATGAAATGATCAGAGATGAGATTAGAGACTGTCCATTATTTGAACT
TGATTTCTACTTTAGAAGTAGGACGCCTATGGAACTGGCTAGAAGAGGTAACACTTTACT
TGGATGTATTGAGAAAGAGTTCAACGCAGGTATTGAGCTTACACCTGAAGTAAAAGAAAG
AATGGAGGAAGAAGACAAGCAAGGCAAGAGAGCCAGAGAAGAGTTTGAGAAGGATAAAGA
GCAAGATGACAACGACTCAGAAACAAAAATGCCTAAAATTGAAAACGACGATGAAGCCAA
GATAACTAGCGAAGAACCAGTTTCCGATATTGCTACTGATGATGCAGAAGTCAAAGAAGA
ATTAAAAGAAGAAACAGTTGAAGCTTAATAAATGATATAAATAATTGTATAATATATTTG
CAGGTATGGTAGAACAAGAATATAGTTTTTGTCCTTACCAAACTCTGGATTTTTGTAATT
CTAGTTGATGGACATTCATTATTCAAAGACGTGGGTCATATTTTATCAAAGTTAATTTCA
GTTTTGATACATATTTATATGATTTTACAGGTATAAGTTATGATAGTAAACAATATTTAT
TTTTTTTGGAATTTAAAATCGCGGTGTGTAAAGCATCAGAATCGATGTCATTATTTTTGA
GCAAGCAATTGCTTAATGTCGTCTTCGA

Coding sequence    

>CAGL0C01683g.cds
ATGGGAAACTCTGGGACTAGTGGTCTTGACGGGCCATATAATTGGAGAAAGCTGTTATGT
GTGTCTAGGAAGTACTATTCGATAAGCATCAAGGAATTGGCGAGAGGTACGATGAGTGAT
TTGACGGAGTACTGGGCGCGGTTGAAGCCCTTGCAAGAGGACATGCCGTCCGCTGATTTG
GAATCGAAGAAAGAGCGGTACTTGGTGAAGGATGCTGGCAAGCCCAAGTTCGATGTTGAG
GCCACTACCAAACGGTTTGAGCATTTATTGTCGCTGAGTGGGTTGTTTAGGCATTTCATT
GAGGGTAAAGCTGCGAAGGATCCCAAGTTCAAGCAGGTCTTGGACATCCTCGACAAGCCT
GGTAAGAAGGGCCAGAAGAAAGGAGGCCACGAGGATGCCAGAAGGCGTAAGACCGAGAGA
GAGGAGGACGCTGAGCTGTTGAAAGAGGAGGAGGATGTTGAGGACGACGCGGATGACATA
GAGTACCTGTTCAGGGAATCGCCAGCTTATATCAATGGTCAGCTGAGAGATTACCAAGTT
CAAGGTTTGAACTGGCTTGTATCCCTGGACAAGAATAGGATTGCGGGTATTCTAGCAGAT
GAAATGGGTCTGGGTAAGACTCTTCAAACTATCTCATTCTTGGGGTACTTACGTTACATA
AAGAAGATTCCAGGCCCATTTCTAGTCATTGCACCAAAATCCACTTTGAACAATTGGCTA
AGAGAAATTAACAAATGGACACCAGAGGTGAACGCATTCATTCTACAAGGTGACAAAGAA
GAAAGAGCCCGCCTGATCCAGGACAAGTTTATGGCTTGCGACTTCGACGTCGTGATCGCA
TCCTATGAAATCATCATCAGAGAGAAGGCAGCGTTCCGTAAAATGAACTGGGAGTATATC
ATGATCGATGAAGCGCACAGAATCAAAAACGAAGAATCAATGCTGTCACAAGTATTGAGG
GAATTCCATTCAAAGAATCGTTTGTTGATAACCGGTACTCCATTGCAAAATAATTTACAT
GAACTGTGGGCACTTCTAAATTTCCTGCTACCCGATATTTTCTCTGATTCTCAGGACTTC
GACGAATGGTTCTCGAAGGAGACTGACGAGGAGGATCAAGAGAAGATTGTCAAGCAACTA
CATACAGTTTTGCAACCGTTCTTGTTGCGTCGTATTAAAAGTGACGTTGAAACATCTCTT
CTACCTAAGAAAGAACTAAATGTTTATGTTGGTATGTCGCCAATGCAGAAGAAGTGGTAC
AGACAAATTTTGGAGAAGGATATAGATGCCGTTAATGCAGACAGCGGCAGCAAAGAATCA
AAGACTAGATTGTTGAACATTGTTATGCAATTGCGTAAATGTTGTAACCATCCATATCTC
TTCGATGGTGCTGAACCTGGTCCACCATATACAACTGACGAGCACTTGGTGTATAATTCT
GAGAAACTAAAGGTTCTTGATAAGTTGTTACGTAAGTTGAAAGAAGCAGGTTCTCGTGTT
CTGATTTTCAGTCAAATGTCCCGTGTTTTGGATATCCTTGAAGATTACTGTTATTTCAGA
GAATATGAATACTGCCGTATTGATGGTTCCACTGCACATGAAGATAGAATTGAAGCCATC
GATGAATATAACGCCCCTGACTCAAAGAAGTTCTTGTTTTTATTGACTACTCGTGCAGGT
GGTCTAGGTATTAACTTAACGACTGCCGATGTTGTTGTCCTATTTGATTCTGATTGGAAT
CCACAAGCTGATTTGCAAGCTATGGATAGAGCTCACCGTATCGGTCAAAAGAAGCAGGTG
AGGGTGTTTAGATTTGTTACTGATAACTCTGTTGAAGAAAAGATTCTTGAGCGTGCTACT
CAAAAACTAAGGCTAGACCAGCTAGTTATTCAGCAAAACAGACCAACTAACAAGAAGAAA
GAAAACAAGAATGACTCTAAGGATGCCTTGTTGTCTATGATCCAACATGGTGCTGCTGAT
GTATTCAAGAGTAATACAACTAGTGAAAGAGGAACACCACAACCAGATGACGATAAAGGT
GAAGATGTTGATTTGGATGAGTTATTGGCCCAGTCTGAGAGTAAGACTCAATCACTTAAC
GCTAAATATGAATCCCTAGGTTTAGATGATTTACAAAAATTCAACCAAGATTCTGCATAT
GAATGGAATGGTACTGATTTCAAAAAGAAGGTTCAGAAAGATATCATTAGTCCTTTGTGG
ATTGAACCTACCAAACGTGAAAGAAAGGAGAATTACTCTATTGATGGCTACTATAAGGAT
GTGCTAAACACTGGTAAGCATTCTACTCCATTGCAACCAAGAATGCCAAAACCTAAGGTT
TTTTACTCTCATCAATTGCAACCTCCACAACTAAAGGTCATATACGAAAAAGAAAGAATG
TGGACAGCAAAGAGAACTAATTATACACCAACGTTAGAGGATGTAAGAGCCACTTATGGA
GAGATAGCGGATGAGGAAGAGAAAAAGCAAAAGTTAGAACTATTGAAAGTATCAATAAGC
AATGCAGAACCTTTGACTGAAGAAGAAGAGCAATTAAAATCACAATGGGAAAACGAAGGT
TTTACCAATTGGACTAAGACTGACTTTAGAAAGTTTATCACCGCTTGCGGTAAGTATGGC
CGTAATTCCATACAAGCGATCACAATGGAGCTAGCGCCTGGTAAGACAGAAGAAGAAGTT
CGCAGATATGCCACTGCATTTTGGAGCAATCTTGAACGTATTGATGATTATGAAAAGTAC
CTGAAGATGATTGAAAATGAGGAGGAGAAAGTAAAGCGTGTCAAACTCCAGCAGGAAGCT
TTGCGTAGGAAATTGTCTCAGTATAAGAATCCGTTCTTCGACTTGAAACTAAAACACCCA
CCTTCCACTAACAACAAGAGAACATTTTCAGATGAGGAAGACAGGTACATACTGATAATG
TTGTTCAAGTACGGTCTCGATAGAGAAAACGTTTATGAAATGATCAGAGATGAGATTAGA
GACTGTCCATTATTTGAACTTGATTTCTACTTTAGAAGTAGGACGCCTATGGAACTGGCT
AGAAGAGGTAACACTTTACTTGGATGTATTGAGAAAGAGTTCAACGCAGGTATTGAGCTT
ACACCTGAAGTAAAAGAAAGAATGGAGGAAGAAGACAAGCAAGGCAAGAGAGCCAGAGAA
GAGTTTGAGAAGGATAAAGAGCAAGATGACAACGACTCAGAAACAAAAATGCCTAAAATT
GAAAACGACGATGAAGCCAAGATAACTAGCGAAGAACCAGTTTCCGATATTGCTACTGAT
GATGCAGAAGTCAAAGAAGAATTAAAAGAAGAAACAGTTGAAGCTTAA

Predicted translation product    

>CAGL0C01683g.aa
MGNSGTSGLDGPYNWRKLLCVSRKYYSISIKELARGTMSDLTEYWARLKPLQEDMPSADL
ESKKERYLVKDAGKPKFDVEATTKRFEHLLSLSGLFRHFIEGKAAKDPKFKQVLDILDKP
GKKGQKKGGHEDARRRKTEREEDAELLKEEEDVEDDADDIEYLFRESPAYINGQLRDYQV
QGLNWLVSLDKNRIAGILADEMGLGKTLQTISFLGYLRYIKKIPGPFLVIAPKSTLNNWL
REINKWTPEVNAFILQGDKEERARLIQDKFMACDFDVVIASYEIIIREKAAFRKMNWEYI
MIDEAHRIKNEESMLSQVLREFHSKNRLLITGTPLQNNLHELWALLNFLLPDIFSDSQDF
DEWFSKETDEEDQEKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNVYVGMSPMQKKWY
RQILEKDIDAVNADSGSKESKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNS
EKLKVLDKLLRKLKEAGSRVLIFSQMSRVLDILEDYCYFREYEYCRIDGSTAHEDRIEAI
DEYNAPDSKKFLFLLTTRAGGLGINLTTADVVVLFDSDWNPQADLQAMDRAHRIGQKKQV
RVFRFVTDNSVEEKILERATQKLRLDQLVIQQNRPTNKKKENKNDSKDALLSMIQHGAAD
VFKSNTTSERGTPQPDDDKGEDVDLDELLAQSESKTQSLNAKYESLGLDDLQKFNQDSAY
EWNGTDFKKKVQKDIISPLWIEPTKRERKENYSIDGYYKDVLNTGKHSTPLQPRMPKPKV
FYSHQLQPPQLKVIYEKERMWTAKRTNYTPTLEDVRATYGEIADEEEKKQKLELLKVSIS
NAEPLTEEEEQLKSQWENEGFTNWTKTDFRKFITACGKYGRNSIQAITMELAPGKTEEEV
RRYATAFWSNLERIDDYEKYLKMIENEEEKVKRVKLQQEALRRKLSQYKNPFFDLKLKHP
PSTNNKRTFSDEEDRYILIMLFKYGLDRENVYEMIRDEIRDCPLFELDFYFRSRTPMELA
RRGNTLLGCIEKEFNAGIELTPEVKERMEEEDKQGKRAREEFEKDKEQDDNDSETKMPKI
ENDDEAKITSEEPVSDIATDDAEVKEELKEETVEA*



Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites