HomeCAGL0C01221g
highly similar to uniprot|P32501 Saccharomyces cerevisiae YDR211w GCD6 Catalytic epsilon subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchange factor for eIF2
Element type: CDS
Element length: 2154 nucleotides,
on anti-sense strand of
Cagl0C: complement(125743..127896).
Other names:
CAGL-CDS1036.1
CAGL-IPF7223
Coding sequence: 718 codons.
Element length: 2154 nucleotides,
on anti-sense strand of
Cagl0C: complement(125743..127896).
Other names:
CAGL-CDS1036.1
CAGL-IPF7223
Coding sequence: 718 codons.
Database cross references:
EMBL: CR380949
GeneID: 2886808
HOGENOM: Q6FX17
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR380949
GeneID: 2886808
HOGENOM: Q6FX17
Homologs and Orthologs
Homologs in protein families: GL3C0213 GL3C0213.N2Orthologs: strict determination not possible; homologs must be refined manually
Protein CAGL0C01221p 
highly similar to uniprot|P32501 Saccharomyces cerevisiae YDR211w GCD6
Protein domain map
Database cross references:
Gene3D: G3DSA:1.25.40.230
InterPro: IPR001451
InterPro: IPR003307
InterPro: IPR005835
KEGG: cgr:CAGL0C01221g
Pfam: PF00132
Pfam: PF00483
Pfam: PF02020
RefSeq: XP_445227.1
SMART: SM00515
SMR: Q6FX17
UniProtKB/TrEMBL: Q6FX17
UniprotKB: Q6FX17_CANGA
Gene3D: G3DSA:1.25.40.230
InterPro: IPR001451
InterPro: IPR003307
InterPro: IPR005835
KEGG: cgr:CAGL0C01221g
Pfam: PF00132
Pfam: PF00483
Pfam: PF02020
RefSeq: XP_445227.1
SMART: SM00515
SMR: Q6FX17
UniProtKB/TrEMBL: Q6FX17
UniprotKB: Q6FX17_CANGA
Gene Ontology terms
| GO:0016779 | nucleotidyltransferase activity |
| GO:0009058 | biosynthetic process |
| GO:0008415 | acyltransferase activity |
| GO:0005488 | binding |
Sequence data
Nucleotide sequence
>CAGL0C01221g.nt ACAAGTTGTCCTCGGTGAGGGGTGGTAGAGATAAATCCTTGAAGGATGAGCTGTTGTTTC TATAAGTAGCCATTTGCCTCTTAAATTCCAATTGGTGGGGATCAGGATACCTATGTAAAT TAGTGTCCTGGTGGCCGACAAGTCGTGGGCCATGTGGGTTTTCATTAGCATCTAATAAAA TACCCTCTGTGAAATCATCACGAGCACAACGGTACGGCTCAAGGTTAAATATCTTAGGTC TTACTATCTTCTGTAAATCGAATGTCATCGGTATAACGGTACTCAATTGAGTCGGTGGTT TATTTTTATCTCTGCATGAACTAATATTACATCAAACAGCAAATTGAAGGTATGGAAGAG ATATCTTCTAATGGGAATAAATATGTACTTTTTATACATTTATGTCGCATTGTTGCCTGA AGCAATGACCAACTATGACTAATTTGCATTAGGGATTTGGTTTGACTTCTTCTCGGAACC CTTTTAGAGTCATATAATACGTGTTCTATGGTATCACCAAATATCGAATAGCAATAGCCA TGCTAAATTATCTAGAAATCATTTGGCATCTAATACATCAGCTGGTAGTATACCCAGCGC AGAGACACTTTGGCTGTTGCTCGTGTTACAAATGTTACAAAATCCCGGACAAAACGCCAT ATAACGCAATGCAACTAGTCAGATTAACAAAGACAAAGGCATCTTATGAGGAAAAACTTC TACTTGTTGTAGTGGCCTAGTGTCATATGCCATATGCACTGCCTTATCTTGTAGCATCTG TGGCATTTACCAACTCTTGGCTCCTAAATACTGCATGTTCCATTATTCAGTAATTTTTTT CAGTTTTTCATTTTTTCATGCGCAAGATGGAGGGCATCGCAAACTGCAAAAACCAAATTT TTTTCACTGGAAAGGCAAACTATATCAGCATAAGCTGGTATATCTTGGTAACCTTTACAC TGATTCCAGCCAAAAGATCAGGCGTAACACATACTAAGCAATGGCAGGTAAGAAAGGGAA AGGTGTTCCCCCCAAAAAGAACGATGACATGGATGTCGAAGACCGTTTGCAGGCTGTTGT CCTTACGGATTCCTACGAGACCAGATTCATGCCATTGACTGCATCTAAACCTCGTTGTCT GATGCCATTGGCGAATGTCCCACTGATCGAGTATACACTAGAATTTCTAGCCAAGGCAGG CGCTGATGAGGTCTTCCTAGCTTGTAGTGCGCACGCCAAGCAAGTCGACGAGTATATTGA GCAATCCAAGTGGAACTTGCCCTGGTCTCCTTTCAAAGTTACCACTTTGATGAACCCGGA AGCCAGGTCTATTGGTGATGTGATGAGAGACCTGGATAACAGAGGTATCATAACAGGCGA CTTCATTCTTGTCAGTGGTGATGTCGTCACTAACATTGACTTTTCGAAGATGTTGAGTTT CCACAAGGAAATGCATGCGAAGGACAAAGACCATATTGCTACAATGTGTCTGAACAAGGC CAGCCAGTATTATATGACAAGAACCATAGAACCAGCTTGTTTCGTCTTGGAGAAATCGAC GAACAGATGTCTATATTACCAGGATATGCCATCACCAAATTCAAGATCTAGGAAAGTCTT AGATGTTGATCCCGAACTTTTGGAAAATGTGGATTCTTTCTCAATGAGAAACGACTTGAT TGATTGTAGAATTGATATATGCACACCTCACGTTCCGCCTATTTTCCAAGACAACTTCGA TTATCAATCCTTGAGATCTGACTTTTTAAAAGGTGTTATTTCCAGTGATCTGTTAGGCAA ACACATTTATGCTTACATAACTGATGAATATGCAGTTAGAGCCGAAAGCTGGCACTCATT TGATACCATATCACAGGATTTCTTAGGTAGACTTTGTTATCCGTTAGTCCTGGAGTCCAA CATCCAGGAAGACCAAACATACTCTTACGAATCAGGTCACATTTACAAAGAAAAGGATGT TGTCCTTGCACAGTCATGTAAGATAGGAAAATGCACAGCCATTGGAGCTGGTACCAAGAT TGGAGAGAGAACAGTGGTTGAAAACTGTGTCATTGGTAGAAACTGTATAATTGGCGAAAA CATCAATATCAAGAACAGTTATATTTGGGATAATACGGTCATTGGCAATGGTTGTAATAT CTCTCATTGTATTGTCGCCTCAAACACAAAGATGGGAGCAAACGTTATCTTGAATGATGG ATGTATCATTGGCTTCGATGTTGTTATTGAGGATAACAAAGAAATACCGGCAGGCAGTAA AATATCTAGTGTTCCAGTTGCAAGCAGCCGTTCAAGACTTCCTGCATCTGATGGTTATGA TGATGAAGATGACGATGAGGAATACTCTGAGACCTTTGATGACACCACGCAGCAAGCTTT GGCTTCTGAACTAGTTGGGGAACATGGTGTAGGTTACGTCTACGAGAGTGATGCTTCTGA TATAGAAGAGTATGATGAAGACGAGTGTTTCAAGATAGTGAATAGCTTGAGGCAGCAAGT CGAAGATATATACCTGAGTGATAACTCCATATCATCGACTAAGAGGAGAACTAAGAAGAA GAGAACCATGTCTACGAACAGTGTATACACTGATCGCGAAGACTACTTGTCAGATGAGGA GGAAGGAGAAGATTTCTTGGTCGAGGGTATTGCCACTGTAGAGAGAGCCATCGAGAACGA TCACGATCTAGATACAGCCCTATTGGAGTTAAACACATTAAGAATGAGTATGAACGTCAC ATACCATGAGGTTAGATTAGCCACAGCCACAGCACTGGTGAGAAGAGTGTATCACTTCAT AGAGACACAGACCTTGGGGCCTAAAGAAGCCGTCCCCAAAGTGTTCGGCCAATGGGGTGC ACTTTTCAACAGACAAGTGTTCGAGCCCGAGGAGTACCTGGATTTGATGAACATCCTGAT GGAGATTATCGCCGAGCAGAAATTCGAGAAACCGGAGTTCATCCTGTTCAGTGCTCTGAA TACCTTGTATGACAACGATATCTTGGAGGAAGACTCCATATATGAGTGGTGGGACAACGT CTCGCAGGACAGCAAATACGACCAAGTCAAGACCCTCACAGCCAAGTGGGTCGATTGGCT CAGGAACGCAGAAGAAGAGTCCGACGACGAGTGATCGTACCTCTATGTCTCGTATATACT TTTAATAGTTTTTTTATTTTTTTGCTACTTCAATAATTTACAGTAAAGGGACATCTCCCG TTAAAACTCTAACATGATCGTCGTATCCCCAACCTCGGCGATCAGTTGCTAGCCAGCATA CGATCAACTGTCCCGCTGTAACCCAGTGCAAAACCGTCAATCACCCAGCGTTTCCATGCG TCAAGGAACGGATGTGGTAATCCGCCCCACACAAATAGCCGAAGAAACCAAGAGTTCCCT TCCAAGAGCAGATCTCTGAGGAAATTCTTTTGGC
Coding sequence
>CAGL0C01221g.cds ATGGCAGGTAAGAAAGGGAAAGGTGTTCCCCCCAAAAAGAACGATGACATGGATGTCGAA GACCGTTTGCAGGCTGTTGTCCTTACGGATTCCTACGAGACCAGATTCATGCCATTGACT GCATCTAAACCTCGTTGTCTGATGCCATTGGCGAATGTCCCACTGATCGAGTATACACTA GAATTTCTAGCCAAGGCAGGCGCTGATGAGGTCTTCCTAGCTTGTAGTGCGCACGCCAAG CAAGTCGACGAGTATATTGAGCAATCCAAGTGGAACTTGCCCTGGTCTCCTTTCAAAGTT ACCACTTTGATGAACCCGGAAGCCAGGTCTATTGGTGATGTGATGAGAGACCTGGATAAC AGAGGTATCATAACAGGCGACTTCATTCTTGTCAGTGGTGATGTCGTCACTAACATTGAC TTTTCGAAGATGTTGAGTTTCCACAAGGAAATGCATGCGAAGGACAAAGACCATATTGCT ACAATGTGTCTGAACAAGGCCAGCCAGTATTATATGACAAGAACCATAGAACCAGCTTGT TTCGTCTTGGAGAAATCGACGAACAGATGTCTATATTACCAGGATATGCCATCACCAAAT TCAAGATCTAGGAAAGTCTTAGATGTTGATCCCGAACTTTTGGAAAATGTGGATTCTTTC TCAATGAGAAACGACTTGATTGATTGTAGAATTGATATATGCACACCTCACGTTCCGCCT ATTTTCCAAGACAACTTCGATTATCAATCCTTGAGATCTGACTTTTTAAAAGGTGTTATT TCCAGTGATCTGTTAGGCAAACACATTTATGCTTACATAACTGATGAATATGCAGTTAGA GCCGAAAGCTGGCACTCATTTGATACCATATCACAGGATTTCTTAGGTAGACTTTGTTAT CCGTTAGTCCTGGAGTCCAACATCCAGGAAGACCAAACATACTCTTACGAATCAGGTCAC ATTTACAAAGAAAAGGATGTTGTCCTTGCACAGTCATGTAAGATAGGAAAATGCACAGCC ATTGGAGCTGGTACCAAGATTGGAGAGAGAACAGTGGTTGAAAACTGTGTCATTGGTAGA AACTGTATAATTGGCGAAAACATCAATATCAAGAACAGTTATATTTGGGATAATACGGTC ATTGGCAATGGTTGTAATATCTCTCATTGTATTGTCGCCTCAAACACAAAGATGGGAGCA AACGTTATCTTGAATGATGGATGTATCATTGGCTTCGATGTTGTTATTGAGGATAACAAA GAAATACCGGCAGGCAGTAAAATATCTAGTGTTCCAGTTGCAAGCAGCCGTTCAAGACTT CCTGCATCTGATGGTTATGATGATGAAGATGACGATGAGGAATACTCTGAGACCTTTGAT GACACCACGCAGCAAGCTTTGGCTTCTGAACTAGTTGGGGAACATGGTGTAGGTTACGTC TACGAGAGTGATGCTTCTGATATAGAAGAGTATGATGAAGACGAGTGTTTCAAGATAGTG AATAGCTTGAGGCAGCAAGTCGAAGATATATACCTGAGTGATAACTCCATATCATCGACT AAGAGGAGAACTAAGAAGAAGAGAACCATGTCTACGAACAGTGTATACACTGATCGCGAA GACTACTTGTCAGATGAGGAGGAAGGAGAAGATTTCTTGGTCGAGGGTATTGCCACTGTA GAGAGAGCCATCGAGAACGATCACGATCTAGATACAGCCCTATTGGAGTTAAACACATTA AGAATGAGTATGAACGTCACATACCATGAGGTTAGATTAGCCACAGCCACAGCACTGGTG AGAAGAGTGTATCACTTCATAGAGACACAGACCTTGGGGCCTAAAGAAGCCGTCCCCAAA GTGTTCGGCCAATGGGGTGCACTTTTCAACAGACAAGTGTTCGAGCCCGAGGAGTACCTG GATTTGATGAACATCCTGATGGAGATTATCGCCGAGCAGAAATTCGAGAAACCGGAGTTC ATCCTGTTCAGTGCTCTGAATACCTTGTATGACAACGATATCTTGGAGGAAGACTCCATA TATGAGTGGTGGGACAACGTCTCGCAGGACAGCAAATACGACCAAGTCAAGACCCTCACA GCCAAGTGGGTCGATTGGCTCAGGAACGCAGAAGAAGAGTCCGACGACGAGTGA
Predicted translation product
>CAGL0C01221g.aa MAGKKGKGVPPKKNDDMDVEDRLQAVVLTDSYETRFMPLTASKPRCLMPLANVPLIEYTL EFLAKAGADEVFLACSAHAKQVDEYIEQSKWNLPWSPFKVTTLMNPEARSIGDVMRDLDN RGIITGDFILVSGDVVTNIDFSKMLSFHKEMHAKDKDHIATMCLNKASQYYMTRTIEPAC FVLEKSTNRCLYYQDMPSPNSRSRKVLDVDPELLENVDSFSMRNDLIDCRIDICTPHVPP IFQDNFDYQSLRSDFLKGVISSDLLGKHIYAYITDEYAVRAESWHSFDTISQDFLGRLCY PLVLESNIQEDQTYSYESGHIYKEKDVVLAQSCKIGKCTAIGAGTKIGERTVVENCVIGR NCIIGENINIKNSYIWDNTVIGNGCNISHCIVASNTKMGANVILNDGCIIGFDVVIEDNK EIPAGSKISSVPVASSRSRLPASDGYDDEDDDEEYSETFDDTTQQALASELVGEHGVGYV YESDASDIEEYDEDECFKIVNSLRQQVEDIYLSDNSISSTKRRTKKKRTMSTNSVYTDRE DYLSDEEEGEDFLVEGIATVERAIENDHDLDTALLELNTLRMSMNVTYHEVRLATATALV RRVYHFIETQTLGPKEAVPKVFGQWGALFNRQVFEPEEYLDLMNILMEIIAEQKFEKPEF ILFSALNTLYDNDILEEDSIYEWWDNVSQDSKYDQVKTLTAKWVDWLRNAEEESDDE*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/CAGL/CAGL0C01221p