HomeCAGL0B04323g
similar to uniprot|P38071 Saccharomyces cerevisiae YBR026c ETR1 2-enoyl thioester reductase, member of the medium chain dehydrogenase/reductase family
Element type: CDS
Element length: 1293 nucleotides,
on sense strand of
Cagl0B: 422687..423979.
Other names:
CAGL-CDS2562.1
CAGL-IPF697
Coding sequence: 431 codons.
Element length: 1293 nucleotides,
on sense strand of
Cagl0B: 422687..423979.
Other names:
CAGL-CDS2562.1
CAGL-IPF697
Coding sequence: 431 codons.
Database cross references:
EMBL: CR380948
GeneID: 2886666
HOGENOM: Q6FXN7
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR380948
GeneID: 2886666
HOGENOM: Q6FXN7
Homologs and Orthologs
Homologs in protein families: GL3C0928 GL3C0928.N3Orthologs: strict determination not possible; homologs must be refined manually
Protein CAGL0B04323p 
similar to uniprot|P38071 Saccharomyces cerevisiae YBR026c MRF1
Protein domain map
Database cross references:
Gene3D: G3DSA:3.40.50.720
InterPro: IPR002085
InterPro: IPR013154
InterPro: IPR016040
KEGG: cgr:CAGL0B04323g
PANTHER: PTHR11695
Pfam: PF08240
RefSeq: XP_445158.1
UniProtKB/Swiss-Prot: Q6FXN7
UniprotKB: ETR1_CANGA
Gene3D: G3DSA:3.40.50.720
InterPro: IPR002085
InterPro: IPR013154
InterPro: IPR016040
KEGG: cgr:CAGL0B04323g
PANTHER: PTHR11695
Pfam: PF08240
RefSeq: XP_445158.1
UniProtKB/Swiss-Prot: Q6FXN7
UniprotKB: ETR1_CANGA
Gene Ontology terms
None available yet
Sequence data
>CAGL0B04323g.nt CCTCCATACACTGGTGCCAACCACAAGGTGATTGCCAACAAGATTAAGAACGATAAGCAG GGCCCTAAGATCCCATACTATCTGAGTGATGGTATGAAAGATGTGCTTGGAGCGCTATTG AAGAGCGATCCCAAGAAGAGATGGGATGTTGACAAGTACTGGAGTGAACCCAAGAAGGAC AACAGCCAGAAGAAAGGCCAGAAGAAGAAGAAATCAAAGGAGAGAACTTCGCCATTCCAG TCTCACTTCGTTTTCCGTAAGGTCGATTGGAAGGGACTCTCCAGTGGTGAGTTGCAGAAT ACAACATTTGGCCCCATTGTCCCTGTGATTACTGACTGGGAACTAGCTGAGAACTTCGAC TCTGAGTTCACATCCATGTCATATGAAGAAGACGACTTCTTGCATCCACTCCACAACAAA TCCCCGGACGCTTTCAAGGGCTTCAGTTTCAAAGCCAGCGGTAGCTACCTGGAGAAGTAC TTCTAGACTGCAGGGAATACCACTCTCTTTTTTTTTATTTCTATATTATTTCATTCTACA AGGTTAAGGGCATTACTAAGATAGACACTTTTCTCGTTTTACTAATTGTTATTTTATTTC TATATCCTGTTCAATATTACTGTTTTGATCGTGTTGGTAATTTTTCCCATGCATGAGGTT TTCTATATATTGCTTATAAAAGGGTTTTAAATATTGAAATAGACATCATCTTTTATATAT TAATGGGCAATTGATCAATTGTCAACTGTTGCTTTGGGATGGACATGTTAATATCTATAT ATCTATTCCAATCGTATGCAACGGATTAGGACGGAGTTTCATATATCATCTGGGATGGAA CAATTTGGGGGTTGGAGGGACTCTGAAATGATGAGATGTTTGTTAATTTGGAAGTCATCG ATGTCTAATGTGGAGAAATCCAGTTTTGGGGGGGAGTTGAGGGGAGTGTACTTGGCTTCC CATCGTACTCGAGGGCCAATGACGTACCTTAAATCATGAAATGTGGTGTTTAGCATTACT AATGCTTCTTGTTCGTTTGCACTGTTTCTTTAAGAGGTATACATATATATATATTACTTG CTGTGTATCCATTTCGCCTGTAGCAGCAAACACTAAGAATAATATTGTTTTTGCTATGTC CGGTCTACGTGCAGCTAGTGTGTTTTCCCCAGTATTCAAGAGAATGGCCTCTTCGATTCC CAGTCAATTCAAGTCTATAATATACAACTCCCACTCCCTTGAGGATTGCACAGGTGTGTT GTCGGTTCATAATTACAAGCCAAAGCAGGACTTGAACAAGTCTGTGGTGCTAAGGACGTT GGCATTCCCAATCAACCCATCGGACATCAACCAATTGCAAGGTGTGTACCCTTCTTTGCC CGAGAAGACTCTGGATTACTCTACGGAGAAGCCCTCTGCCATTGCCGGTAACGAGGGTCT ATTTGAAGTCGTGTCCCTGCCTGAGCATGGCGACCACGGTGAGTTGAAAGTCGGCGATTG GGTCATCCCTGTACAGGCCAACCAAGGGACGTGGTCTAACTACAGGGTCTTTGACAAGGC CTCTGACCTGATTAAAGTGAACGGACTGGACCTGTACTCTGCGGCTACGGTCTCTGTCAA TGGCTGCACAGCGTACCAGCTGGTGAACAACTATGTGGACTGGAATGCGGATGGTAATGA ATGGCTGATCCAGAATGCCGGTACTTCTGGGGTGTCAAAGTTCGTCACGCAGATAGCCAA GGCCAGAGGTGTCAAGACGCTGAGTGTTATACGTGATAGGGACAACTTTGAAGAAGTTGC AGAGGTCCTGGAGCAGAAATTCGGTGCCACCAAGGTCATCTCTGAGTCTCAGAACAACGA CAAGGACTTCGGCAAGAAAGAGTTGCCAAAGGTGCTCGGCGACAAAGCGAGGGTCAGATT GGCACTGAACTCTGTTGGTGGTAAGTCCAGCTCTGCGATAGCTAGAAAGCTGGAAAGAGA TGCATTGATGCTCACCTATGGTGGTATGTCCAAGCAACCAGTCACCATCCCAACGTCGCT ACATATCTTCAAGGGCCTGACCTCTAAGGGCTACTGGGTCACAGAGAACAACAAGCGTGA TCCAACGGATAAGGTCAACACCATCAAGGGATTCATCGACTTGTACAAGCAAGGGAAGAT TATCTCACCCGAAGAGGAGATAGAGACCATGGAATGGGACGCAAACAACGGCGACGACCA GCAACTCCTAGAGCTGGTCAAGAGAGGAATAACCGAGAAGGGCAAGAAGAAAATGGTGCT CTTGAAGTGGTAGTTGTGTAGCAAGTCCTTTTATATAATATTCTTTTACAATGCAAAAAA AAAAAAGCCTTAAAACTCGCAAAATATACGTTAAAGAACCTGTTCAAAAGAACTCCAAAG AAGATTATCCTGTAGCATACTGAAACTGCAGGACTATAAACGCTTGCTGGCTTCTGCAGA GCACACTTGAGCTGCTGAACAGCATTATATCCAAATGTGAGCTGTTCCTGCGCTATAACC CATATATATCATGTGACATACAATTGCACAGAGTGATTGAAAAATTTTCATAGAAATCGT CTAGCGACACCTC
>CAGL0B04323g.cds ATGTGGTGTTTAGCATTACTAATGCTTCTTGTTCGTTTGCACTGTTTCTTTAAGAGGTAT ACATATATATATATTACTTGCTGTGTATCCATTTCGCCTGTAGCAGCAAACACTAAGAAT AATATTGTTTTTGCTATGTCCGGTCTACGTGCAGCTAGTGTGTTTTCCCCAGTATTCAAG AGAATGGCCTCTTCGATTCCCAGTCAATTCAAGTCTATAATATACAACTCCCACTCCCTT GAGGATTGCACAGGTGTGTTGTCGGTTCATAATTACAAGCCAAAGCAGGACTTGAACAAG TCTGTGGTGCTAAGGACGTTGGCATTCCCAATCAACCCATCGGACATCAACCAATTGCAA GGTGTGTACCCTTCTTTGCCCGAGAAGACTCTGGATTACTCTACGGAGAAGCCCTCTGCC ATTGCCGGTAACGAGGGTCTATTTGAAGTCGTGTCCCTGCCTGAGCATGGCGACCACGGT GAGTTGAAAGTCGGCGATTGGGTCATCCCTGTACAGGCCAACCAAGGGACGTGGTCTAAC TACAGGGTCTTTGACAAGGCCTCTGACCTGATTAAAGTGAACGGACTGGACCTGTACTCT GCGGCTACGGTCTCTGTCAATGGCTGCACAGCGTACCAGCTGGTGAACAACTATGTGGAC TGGAATGCGGATGGTAATGAATGGCTGATCCAGAATGCCGGTACTTCTGGGGTGTCAAAG TTCGTCACGCAGATAGCCAAGGCCAGAGGTGTCAAGACGCTGAGTGTTATACGTGATAGG GACAACTTTGAAGAAGTTGCAGAGGTCCTGGAGCAGAAATTCGGTGCCACCAAGGTCATC TCTGAGTCTCAGAACAACGACAAGGACTTCGGCAAGAAAGAGTTGCCAAAGGTGCTCGGC GACAAAGCGAGGGTCAGATTGGCACTGAACTCTGTTGGTGGTAAGTCCAGCTCTGCGATA GCTAGAAAGCTGGAAAGAGATGCATTGATGCTCACCTATGGTGGTATGTCCAAGCAACCA GTCACCATCCCAACGTCGCTACATATCTTCAAGGGCCTGACCTCTAAGGGCTACTGGGTC ACAGAGAACAACAAGCGTGATCCAACGGATAAGGTCAACACCATCAAGGGATTCATCGAC TTGTACAAGCAAGGGAAGATTATCTCACCCGAAGAGGAGATAGAGACCATGGAATGGGAC GCAAACAACGGCGACGACCAGCAACTCCTAGAGCTGGTCAAGAGAGGAATAACCGAGAAG GGCAAGAAGAAAATGGTGCTCTTGAAGTGGTAG
>CAGL0B04323g.aa MWCLALLMLLVRLHCFFKRYTYIYITCCVSISPVAANTKNNIVFAMSGLRAASVFSPVFK RMASSIPSQFKSIIYNSHSLEDCTGVLSVHNYKPKQDLNKSVVLRTLAFPINPSDINQLQ GVYPSLPEKTLDYSTEKPSAIAGNEGLFEVVSLPEHGDHGELKVGDWVIPVQANQGTWSN YRVFDKASDLIKVNGLDLYSAATVSVNGCTAYQLVNNYVDWNADGNEWLIQNAGTSGVSK FVTQIAKARGVKTLSVIRDRDNFEEVAEVLEQKFGATKVISESQNNDKDFGKKELPKVLG DKARVRLALNSVGGKSSSAIARKLERDALMLTYGGMSKQPVTIPTSLHIFKGLTSKGYWV TENNKRDPTDKVNTIKGFIDLYKQGKIISPEEEIETMEWDANNGDDQQLLELVKRGITEK GKKKMVLLKW*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/CAGL/CAGL0B04323p