HomeCAGL0A03740g
highly similar to uniprot|P13711 Saccharomyces cerevisiae YGL205w POX1 Fatty-acyl coenzyme A oxidase, involved in the fatty acid beta-oxidation pathway
Element type: CDS
Element length: 2247 nucleotides,
on sense strand of
Cagl0A: 384820..387066.
Other names:
CAGL-CDS0943.1
CAGL-IPF1207
Coding sequence: 749 codons.
Element length: 2247 nucleotides,
on sense strand of
Cagl0A: 384820..387066.
Other names:
CAGL-CDS0943.1
CAGL-IPF1207
Coding sequence: 749 codons.
Database cross references:
EMBL: CR380947
GeneID: 2886280
HOGENOM: Q6FY63
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR380947
GeneID: 2886280
HOGENOM: Q6FY63
Homologs and Orthologs
Homologs in protein families: GL3C0456 GL3C0456.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein CAGL0A03740p 
highly similar to uniprot|P13711 Saccharomyces cerevisiae YGL205w POX1
Protein domain map
Database cross references:
Gene3D: G3DSA:1.10.540.10
Gene3D: G3DSA:1.20.140.10
Gene3D: G3DSA:2.40.110.10
InterPro: IPR002655
InterPro: IPR006091
InterPro: IPR012258
InterPro: IPR013764
InterPro: IPR013786
KEGG: cgr:CAGL0A03740g
PANTHER: PTHR10909:SF11
PIRSF: PIRSF000168
Pfam: PF01756
Pfam: PF02770
RefSeq: XP_444930.1
UniProtKB/Swiss-Prot: Q6FY63
UniprotKB: ACOX_CANGA
Gene3D: G3DSA:1.10.540.10
Gene3D: G3DSA:1.20.140.10
Gene3D: G3DSA:2.40.110.10
InterPro: IPR002655
InterPro: IPR006091
InterPro: IPR012258
InterPro: IPR013764
InterPro: IPR013786
KEGG: cgr:CAGL0A03740g
PANTHER: PTHR10909:SF11
PIRSF: PIRSF000168
Pfam: PF01756
Pfam: PF02770
RefSeq: XP_444930.1
UniProtKB/Swiss-Prot: Q6FY63
UniprotKB: ACOX_CANGA
Gene Ontology terms
None available yet
Sequence data
Nucleotide sequence
>CAGL0A03740g.nt GCAAATCACTCATATCCAGTTGGTTTCTCAATAACAAGTGTTCAATGCTCCTTCTTCCTG TTCTACCCTTTGCATATAAATCTCTCAAGGCCAAACAAAAGGGGTATTTTTTTCTGATTT CTTTCTAAAAAGCTCTTTGCTTATGTATATGGACTTTGTTGTGGAATAGAATGGATTGTA GGGGGGGAATAGACAAGTCAGGGAGTAGTGTAATCTTTCAGCGGCTAAGAGTTCCCTCCT TGCAGTTTTATCAATTTGCAGCCCACCACTTTAAAGGTCGACTCGATTCGATTCCTCGAA ACTTTTTGGCTCGTCCCCCCTCCTCCCCCCTCGTCCGTTTCGAAGAAAAGGTCTGGTTGT ACGTGTATCATGTGTCTTAGTGATGTGTGATGTTATTTATTCTTATATACGTATATCATA TGATATACGTATAACTAGATATATTGATATATTACAGTACGGCATAACCACATGGTATAC GTTTGCACGTATACCCCGAGAGAAAGAGAGTCATTCACTTGGAAGTGCCCCCCCCCCTCT TTCCCCACACAGCACATACGTTAGTGTGATTTACGTGTTTTATTTGGTCGTACCCAGTGA ATGGTCTGCACAAGCACAAGCACAAGCACAAGCAAGTAGTTGTGTACTTAGACAACACCG TACGAAATCCCAACACATCCTCTCCCCTCCCCCCTTCATCCGGACACCCAGAAGGGGAGA CAAGGGAAACCCCAAAACTCCAGCCCTGAGGTGTCACATCCAGCGTATTACAGCGTATTA CAGCGTATTACAGCCGTCGCTCCCCCATCCCCTTAGATCGGAGTTAAGAAGATTGGAATA ACCCGGGTGGATGAAATAATCACCGATCTCTCTCAAGTCCAAAGCTCATCGCATCGCATT ACAACTTCTTGACATATAAATACGGATGGCAATTGTAACCGGGGTAGTGCTTTACCAGTA AGAGAATAATCTCAACCCAAAACAAAACCAAAAACCATAAATGACTAAGCTATCTACAGT TGACCCTAATGCTTCTGTGCTAAACCCGCAGAGGTTTATCCAGCGGGAGCGGGAGAACTG CTCCATTGACATCGACCAAGTGAACACTTTCTTGGAGTCGGACCCCAGGTCTAGGGACCT GACGCACTTGATCGTTGACCAGCTGGTCAACGACCCGATCATCAAGGCCGATAGCGCCAC TTATGACCAGACAAAGCTCACACAGAGGGAGGTCACGGTCAAGAAGATCGCCCGTATGGC GCTGTACATGGAACAGGACATCAAGACGGTGCGCAAGCACTTCAGAGACACAGACCTGTT GAAGTCCCTGCAGGACTTCGGGGACACCACCACCCCACCGCTGACCAACAAGGACCTCGC CATCTTCGACAAGAGACTCTCCTTGGTCGCAAACATGGACCCGCAGCTGTCCACCAGAAT AGGTGTGCACCTGGGGCTGTTCGGAAACTGTATCAAGGGTAACGGTACCGACGAGCAGAT CAAGTACTGGCTGCAGACCAGGGGCGCTATCTTGATCAAAGGAATCTACGGGTGCTTCGC CATGACCGAGCTCGGCCACGGCTCAAACGTCGCCCAGCTGCAGACCACCGCTACGTACGA CCAGGAGTCCGACACCTTCATCATCAACACCCCAGACTTGGCAGCTACCAAGTGGTGGAT CGGCGGTGCCGCTCACTCCGCAACCCACACCGCGTGCTACGCTAGACTACTGGTCAACGG GAAGGACTACGGTGTCAAGACGTTCGTCGTGCCCCTGCGTGACCCTTCCTCATTGCAACT AATGCCAGGCATCGCCATCGGCGACATAGGCGCCAAAATGGGCCGTGACGGTATCGACAA CGGCTGGATCCAGTTTAGAAACGTCGTCATCCCAAGGGAGTTCATGCTAAGCAGATTCAC TAAAGTGCACAGAAACCCAGGCGCAACTCCAACTGTGGAGGTAGACCCTCAGCTTGACCA AATCTCAGGTTATTCAGCTTTGCTAAGTGGTAGAGTTAACATGGTCATGGACTCCTTCAG ATTCGGCTCAAAGTTCGCTACCATCGCAACACGTTACGCTGTAGGCAGACAACAGTTCGC TGACAAACCAGGCCAACCAGAAAAACAATTGATCGACTACCCATTGCACCAATACCGTGT CTTACCTCAGATCGTGATCCCTTACATTATTTCTCCAGCGGCCTTCTCCTTGTTGAACTT CTACTACTCCACTCTGGATGAATTGTACGCAGCTTCTTCAAAGAATGACAAGAGGGCATT GGTCGTGGTTAGCCAAAAGCTAAAGAACTTGTTCATCGACAGTGCAAGCTTGAAAGCTAC TAACACTTGGTTAGTGGCCCAGTTGATCGATGAATTAAGACAAACTTGTGGTGGTCACGG CTACTCCGGTTACAATGCCTTCGGTAAAGGTTACAACGACTGGGTAGTCCAATGTACTTG GGAAGGTGACAACAACATCTTGTCCTTGACCTCTGCAAAGTCTATCTTGAAGAAGTTTGT TGATTCCGCTACTAAGGGTAAGTACAACAAGGAATTGGACAAGAGATCCTTCAGATACTT GGACCCACAATTCATCCGGAAAGTGTTCACCTCTTCTTCCGAGAACAAGTTGGATGACTT GTACGACTACACCAACATTTGGGCAGTCGCTCTATTGAAGCTTTTGAGACACATTGCTAA GCAAGTTGACTCAACCAAGGATCTGGACGGCGCTTCCAAGCTGTTAGTTTTGGTCTCTAA GTTCCATGCTTTATATGTCATGTTAAATACCTACTATGAAAAGTTGAACTCTCCAACTGA CTCATATGTTACTTGTCCAAAGACGAAGGAGCAATTATGGAATGTTTACAAGTTGTTCTC TCTATATTTCATCGACAAGCATGCCGGTGAATTCCAACAATTCAAGATTTTGTCTCCAGA TCAAATATCTCAAGTTGTTCAGCCAAGACTATTGAAATTACTACCAGAGATCAGAAAGGA GTGTATCTCTTTAACTGACTCATTCAAATGGCCAGACGGAATGTTGAACGCTCCAATTGG TTATTACGATGGTGATATCTATCATAACTATTTCAATGAAGTCGTTAAGAATAACCCAGT GGAGAAAGATGGAGCTGGTATCCCACCTTATCACGAGTTATTGGCAAACATGCTAACTAG AGGCGATGAATTTGCTAGGTTGGGTGGTGCTAATAACGCTGAGATATTGTCAAAGTTGAC TAAGTAAGCCTTGATGTGAAGTGAGTGAAACTGCTGTTCTTAACCTTGTATGCATACTTC CTCCTGGGAATTATCCCAAAAAAAATTGGAAATTATACTTCTATTACTTCCCTGTTTTTA AATATTCTATTTAAAGCTGTTTTTATAGCACTATGTCGTGTCATGATTAATGATAATATT CGAATACACTGAAAATATCTAATTGCCCTTTATATTTGTACTTATGTATAATATCCCCAA TGTCTAGTCATTCTAATTAGTGATTCATGTGTTAGATAATAAAAAAGATATAACTCCTAC CTTTACG
Coding sequence
>CAGL0A03740g.cds ATGACTAAGCTATCTACAGTTGACCCTAATGCTTCTGTGCTAAACCCGCAGAGGTTTATC CAGCGGGAGCGGGAGAACTGCTCCATTGACATCGACCAAGTGAACACTTTCTTGGAGTCG GACCCCAGGTCTAGGGACCTGACGCACTTGATCGTTGACCAGCTGGTCAACGACCCGATC ATCAAGGCCGATAGCGCCACTTATGACCAGACAAAGCTCACACAGAGGGAGGTCACGGTC AAGAAGATCGCCCGTATGGCGCTGTACATGGAACAGGACATCAAGACGGTGCGCAAGCAC TTCAGAGACACAGACCTGTTGAAGTCCCTGCAGGACTTCGGGGACACCACCACCCCACCG CTGACCAACAAGGACCTCGCCATCTTCGACAAGAGACTCTCCTTGGTCGCAAACATGGAC CCGCAGCTGTCCACCAGAATAGGTGTGCACCTGGGGCTGTTCGGAAACTGTATCAAGGGT AACGGTACCGACGAGCAGATCAAGTACTGGCTGCAGACCAGGGGCGCTATCTTGATCAAA GGAATCTACGGGTGCTTCGCCATGACCGAGCTCGGCCACGGCTCAAACGTCGCCCAGCTG CAGACCACCGCTACGTACGACCAGGAGTCCGACACCTTCATCATCAACACCCCAGACTTG GCAGCTACCAAGTGGTGGATCGGCGGTGCCGCTCACTCCGCAACCCACACCGCGTGCTAC GCTAGACTACTGGTCAACGGGAAGGACTACGGTGTCAAGACGTTCGTCGTGCCCCTGCGT GACCCTTCCTCATTGCAACTAATGCCAGGCATCGCCATCGGCGACATAGGCGCCAAAATG GGCCGTGACGGTATCGACAACGGCTGGATCCAGTTTAGAAACGTCGTCATCCCAAGGGAG TTCATGCTAAGCAGATTCACTAAAGTGCACAGAAACCCAGGCGCAACTCCAACTGTGGAG GTAGACCCTCAGCTTGACCAAATCTCAGGTTATTCAGCTTTGCTAAGTGGTAGAGTTAAC ATGGTCATGGACTCCTTCAGATTCGGCTCAAAGTTCGCTACCATCGCAACACGTTACGCT GTAGGCAGACAACAGTTCGCTGACAAACCAGGCCAACCAGAAAAACAATTGATCGACTAC CCATTGCACCAATACCGTGTCTTACCTCAGATCGTGATCCCTTACATTATTTCTCCAGCG GCCTTCTCCTTGTTGAACTTCTACTACTCCACTCTGGATGAATTGTACGCAGCTTCTTCA AAGAATGACAAGAGGGCATTGGTCGTGGTTAGCCAAAAGCTAAAGAACTTGTTCATCGAC AGTGCAAGCTTGAAAGCTACTAACACTTGGTTAGTGGCCCAGTTGATCGATGAATTAAGA CAAACTTGTGGTGGTCACGGCTACTCCGGTTACAATGCCTTCGGTAAAGGTTACAACGAC TGGGTAGTCCAATGTACTTGGGAAGGTGACAACAACATCTTGTCCTTGACCTCTGCAAAG TCTATCTTGAAGAAGTTTGTTGATTCCGCTACTAAGGGTAAGTACAACAAGGAATTGGAC AAGAGATCCTTCAGATACTTGGACCCACAATTCATCCGGAAAGTGTTCACCTCTTCTTCC GAGAACAAGTTGGATGACTTGTACGACTACACCAACATTTGGGCAGTCGCTCTATTGAAG CTTTTGAGACACATTGCTAAGCAAGTTGACTCAACCAAGGATCTGGACGGCGCTTCCAAG CTGTTAGTTTTGGTCTCTAAGTTCCATGCTTTATATGTCATGTTAAATACCTACTATGAA AAGTTGAACTCTCCAACTGACTCATATGTTACTTGTCCAAAGACGAAGGAGCAATTATGG AATGTTTACAAGTTGTTCTCTCTATATTTCATCGACAAGCATGCCGGTGAATTCCAACAA TTCAAGATTTTGTCTCCAGATCAAATATCTCAAGTTGTTCAGCCAAGACTATTGAAATTA CTACCAGAGATCAGAAAGGAGTGTATCTCTTTAACTGACTCATTCAAATGGCCAGACGGA ATGTTGAACGCTCCAATTGGTTATTACGATGGTGATATCTATCATAACTATTTCAATGAA GTCGTTAAGAATAACCCAGTGGAGAAAGATGGAGCTGGTATCCCACCTTATCACGAGTTA TTGGCAAACATGCTAACTAGAGGCGATGAATTTGCTAGGTTGGGTGGTGCTAATAACGCT GAGATATTGTCAAAGTTGACTAAGTAA
Predicted translation product
>CAGL0A03740g.aa MTKLSTVDPNASVLNPQRFIQRERENCSIDIDQVNTFLESDPRSRDLTHLIVDQLVNDPI IKADSATYDQTKLTQREVTVKKIARMALYMEQDIKTVRKHFRDTDLLKSLQDFGDTTTPP LTNKDLAIFDKRLSLVANMDPQLSTRIGVHLGLFGNCIKGNGTDEQIKYWLQTRGAILIK GIYGCFAMTELGHGSNVAQLQTTATYDQESDTFIINTPDLAATKWWIGGAAHSATHTACY ARLLVNGKDYGVKTFVVPLRDPSSLQLMPGIAIGDIGAKMGRDGIDNGWIQFRNVVIPRE FMLSRFTKVHRNPGATPTVEVDPQLDQISGYSALLSGRVNMVMDSFRFGSKFATIATRYA VGRQQFADKPGQPEKQLIDYPLHQYRVLPQIVIPYIISPAAFSLLNFYYSTLDELYAASS KNDKRALVVVSQKLKNLFIDSASLKATNTWLVAQLIDELRQTCGGHGYSGYNAFGKGYND WVVQCTWEGDNNILSLTSAKSILKKFVDSATKGKYNKELDKRSFRYLDPQFIRKVFTSSS ENKLDDLYDYTNIWAVALLKLLRHIAKQVDSTKDLDGASKLLVLVSKFHALYVMLNTYYE KLNSPTDSYVTCPKTKEQLWNVYKLFSLYFIDKHAGEFQQFKILSPDQISQVVQPRLLKL LPEIRKECISLTDSFKWPDGMLNAPIGYYDGDIYHNYFNEVVKNNPVEKDGAGIPPYHEL LANMLTRGDEFARLGGANNAEILSKLTK*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/CAGL/CAGL0A03740p