HomeCAGL0A03432g
similar to uniprot|P32849 Saccharomyces cerevisiae YLR032w RAD5 DNA helicase proposed to promote replication fork regression during postreplication repair by template switching
Element type: CDS
Element length: 3456 nucleotides,
on sense strand of
Cagl0A: 349884..353339.
Other names:
CAGL-CDS0277.1
CAGL-IPF1231
Coding sequence: 1152 codons.
Element length: 3456 nucleotides,
on sense strand of
Cagl0A: 349884..353339.
Other names:
CAGL-CDS0277.1
CAGL-IPF1231
Coding sequence: 1152 codons.
Database cross references:
EMBL: CR380947
GeneID: 2886385
HOGENOM: Q6FY76
Orthologs: strict determination not possible; homologs must be refined manually
EMBL: CR380947
GeneID: 2886385
HOGENOM: Q6FY76
Homologs and Orthologs
Homologs in protein families: GL3C0449 GL3C0449.N1Orthologs: strict determination not possible; homologs must be refined manually
Protein CAGL0A03432p 
similar to uniprot|P32849 Saccharomyces cerevisiae YLR032w RAD5
Protein domain map
Database cross references:
Gene3D: G3DSA:3.30.40.10
InterPro: IPR000330
InterPro: IPR001650
InterPro: IPR001841
InterPro: IPR013083
InterPro: IPR014001
InterPro: IPR014021
InterPro: IPR014905
KEGG: cgr:CAGL0A03432g
PROSITE: PS00518
PROSITE: PS50089
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00097
Pfam: PF00176
Pfam: PF00271
Pfam: PF08797
RefSeq: XP_444917.1
SMART: SM00184
SMART: SM00487
SMART: SM00490
UniProtKB/Swiss-Prot: Q6FY76
UniprotKB: RAD5_CANGA
Gene3D: G3DSA:3.30.40.10
InterPro: IPR000330
InterPro: IPR001650
InterPro: IPR001841
InterPro: IPR013083
InterPro: IPR014001
InterPro: IPR014021
InterPro: IPR014905
KEGG: cgr:CAGL0A03432g
PROSITE: PS00518
PROSITE: PS50089
PROSITE: PS51192
PROSITE: PS51194
Pfam: PF00097
Pfam: PF00176
Pfam: PF00271
Pfam: PF08797
RefSeq: XP_444917.1
SMART: SM00184
SMART: SM00487
SMART: SM00490
UniProtKB/Swiss-Prot: Q6FY76
UniprotKB: RAD5_CANGA
Gene Ontology terms
None available yet
Sequence data
>CAGL0A03432g.nt GAGTCAAATGATAAGAAAAAGCATAAGAAACTACAAACAACGGAAAAGGAATAGGTTGAA ATTTTGTCATAATTTGAACGGTAAATATTTGGGACTTAATAATACCAAGCTGAGTACAAA TTTTATTTTGCCAGATATCCCAGTAACAATGTCAACTAATGAAAGAGAATGGTTACCACA GATTGAACCAATAATGGTTAGGGATATGGTAATTGAATTTCCTACAATTGAAAGCATCAC ATACAGCGAAGCAGATATAACCACATTATCCAACGATGTTCCTCAAATAATTGATTTCTA TCTGGATAATGACATTGATGATATAGAATCATTGAAACATCGCAAAAACATGATCTCTAT AAAGAAGAGACTTGTGGAACAGAAAATAACCGATCTAACCAATTTACTTCAAAGAAAGAC ACCCGAACATTGTTACCGTCAAAGGACCAGTAGGGACAAAGTTATATCTATGATGAATGA TTTACAAAGACTGAACTTTGAAGTAGAAACGAAAAAAAGAACTATAGAGCTACTAAAGTC GCAAAATCTTAGAATGCCAAAATATTGAATGACATGCCAAAAAACTGAGCAAGTTTTGTC TTTATCTTCATCAATTTTTTTGAAAGAGGGATTGCATTATACAAACGCGATGGCATCATC GCGTGAATAAATTTACTATTTTGTTTTCTTTTTTAGAAATTAATGAATTAGAGTTTCGCT CTTCTCCCCACAAAAATGACAACACTACGTGATGTAATATAATAAATGAAGAAAAAAAAA AAATTGGTAAATATTATTAGAAGAGTTAATATAATTATTACAGACTATTGTCCAACATAT ACAACTTAGCAGACATTTCAAAAGGACTAATACTATATAAAAAAAGTTAATAGTTGTTCA AACTAAAGACATCTGAAGTTTTTTACAATCCATAGAAGGGAGGCCTATTAGATAGATACT ATATCTTGAATACAAAGTAAGAGCCAATGGTACTTTAGTAATGGATCAGAATGCAAACCA GAAGAAACGATTCTTTAAAGATGAACTCGAGTCGTCTATCGAAACCACTTTGACTGATAA ATCATCTTTTCTATTTGAACCGCAGGTAGATGCGATTCAGGAAGAAAATGCAAATGATCC AGAAGAGCAAATTGCACAAGGTACACAGGAATCACCCTTTATAGAGCAGCTAAGAGCAGT GTTGCCCACTATCCGGTTAGAAGTGGCCTTAGCACTTGAAGAAAAATATAGGGATATTGA CGACGGGTTGGATCTGGCTATCTCAGAGTATTTTGACCAATATCAAACCGGAAATGACGA TGCACCACCATCGTCTTTGGAACTGCAACATTCCCAAGAAGTGTTGACGGTGCCTGATAA TGAAGAGAAGGATACAGATCTTCAACTAGTAAGTGTGAAGAGGAAACGTGAGGACGATTT CATGCAGTCTAGTCAATCAAAAAAGCCCCAAAGGGCAAACAGTAGTTGGAAAAAGTTTGT TGGATCACTACAAGTTACAGTGATGGTTACGAGACCTACAATGAGACCTGTCCCATACGG GACACCACTTATCTTTAAAAGATCCAATAATAATGTGCCTTTAAAGAAAATTTACGAACA ATTGAACAAGAAAAAGACAGGTCTTGCTGCATTTGTTAAGATTTATAGTGCCAATGATGA AAGGGAAATTGGTAGAGTTCCCGAAGATATAGCTCGAATTGTTTTTCCTCTTCTTCATCG AAACGAAGTCCATTTTAAACTAACAATGATCTATCCTGGTGATAAGAGACTAAGCATAGG TGATAATATAATTATCCAAATGGACTCATTTCTAACCTCCACACTGTTTAATCGCAAAGA AAATCCTACGTTTTCGACTCAAAATGGAAATGGGCGTGAAAGATTTGGAGCAATAGTGGA AACTGAACAGGAACTGGAAGAAAGAAATATAAGAATGGGTTTAATCATGTTATTCGATAA GATAAAATTAAGGCCAGTTAAAGATGAGGCCAAATTTTTAGAAAAGTTGAAACAAGATGG CGATGACAACGAAATAGTTGATCTGGAAGACGATGAGAGTTTTGGGAATTTCTTATCACA AGAACCTTTAAACGATGAGTTACCAACTCAGCATCAAGAAGATACGATGAATATCAATCA ATTGACCTCCTTTTATAAAGCAACGCAATCTTCTAAACAACTAAATAGCTTAATACCGAC AACGCCTCCACCAGAGCTAGTTAAAGTGGAACTTCGCAAGTATCAAAAGCAAGGTTTAAC TTGGATGTTGAGAAGAGAGGGTATTTCCATAGGCCATGATAATGAAGATAAATCCGAAGA TGATACTACACTTCTTAACCCCTTGTGGCGACAATTTCAGTGGCCCAGGAATATGTCATG GCATAATCAATCTACAGGGAGTGAAAATGACAATTCAAATCCTAAGCTGATTTTCTTTTA TGGGAATCTTCATACTGGTGAATTTTCTCTTGAGAGGCCAACGATGAATTCTTTCAAGAA TGGTGGTATATTGTCCGATGAGATGGGTTTAGGTAAAACTATTTCAGCTCTATCATTAGT ACTGATGAGACCAAAGGACGAACATACTACCAGTCAGTCACTGTTTCACCAAGAGAGTTC TAATTTATCAAGTGATGATGTAATAGAAATCAAAGAACCGGAAAGATCATATGCTTACAA AACAACGCTAATCATTGTGCCGATGTCATTATTAACCCAGTGGCGTGATGAGTTTGACAA AGTCAATAATAATGCTGGATTAACGTGTGAGTTATATTATGGAGGTAATGTGAGTAGTCT CAAAAGCTTACTGATCAAAAGAAAGAACCCACCAACTGTTGTTCTAACTACTTATGGTAT TGTTCAGAATGAATGGACAAAGTTAAGTAAAGATGGAACAAATATCAGGTCTCTGGGACG AACTTCTGGTATTTTTTCTATCGAGTTTTTTAGGATAATTCTAGATGAGGGCCATACTAT AAGAAATAAATCTACAATTACTTCTAAAGCGGTATTAGAACTATCTTCAAAATATAGATG GATACTGACTGGTACCCCAATTATCAATAGACTGGATGATTTATATTCTTTGGTAAAATT TTTGAAGTTAGAACCTTGGTCTCAGATCGGTTATTGGAAACAATTCATTACAAATCCTTT CGAGGAACGAAATTTTAAGCAAGCATTTGATGTTGTTAATGCTATTATGGAACCCGTATT ACTAAGAAGAACAAAGCAGATGAAAGATACTGATGGAAATCCTCTTGTTCAGCTACCTCC AAAGGAAATTGTTATTGAGAAATTACAATTATCTAAGAAACAGAAATTAATATATGAAGA GTTTTTGCAAAGGGCAGAGAAAACATTCAGATCAGGTCTACAATCAGGTGATCTCTTGAA AAAATATTCAACTATCCTGGTTCATATATTAAGACTTCGCCAAGTTTGTTGTGATTCAAA TCTAATTGGAACCTTAGATGAAAATGATGAAGATTTGTCTTCAGGTAATAACAAGCTAAT AACTGAATCAGTTGATGTAAAAACCCTAATACCAGATACAGAGGAGGAGGAAGATGAGGT ACCTCCATTTGAAAATGACGAACTTGACAAATTGATTGAATCTGTAGAGGCAAAATTTAT TGATTCAAACCAACTGATACCTGTTGAGTGTTCTATATGTACAGCGGAACCTATTGAGAG CTCGTCTGCGGTTGTTACAGAATGTGAGCATGTTTTTTGTAAGGAGTGTCTGGAGGAATA TGGTAACTTCCAAAAAGAGAAAAGCTTGCAACAAAAGTGTCCTAACTGTAGGAGGGACAT CAATTTAAATAGATGCCTAGCCTTTGAAAAAGGCTCTGATGGAATTCTAAAGCTGATCCA TTTTGACCGTAAGGAACGGCCTGCGAAGCTTAATGCCTTAATAAGGCACTTACAACAGCT ACAAGATAGTTCTGCCGGTGAGCAAGTAGTAGTATTTTCACAATTCTCCTCATATTTAGA TATATTGGAGTCACAACTAAACGAGGTCTATTCATCAAATAAGTTGAAAGTTTACAAATT TGATGGTCGCCTGTCCTTAAAAGAGCGTACTGCGGTGCTAGAAGATTTCAAAGTCAAAGA TTATGCAGTACAGAAGGTTTTGCTTCTATCATTAAAAGCTGGTGGTGTTGGGTTGAACTT GACCTGTGCGTCTTATGCATTTATGATGGACCCGTGGTGGTCGCCCAGTATGGAGGATCA AGCAATCGATAGAATTCATAGGATAGGGCAGACTAACAGTGTGAAAGTCATCAGATTTGT AATAGATGGCTCTATTGAAGAAAAAATGTTAAGGATCCAGGACCGTAAAAGAACGCTAGG TGAAGCCATGGATACTGATGAGGATGAGAGACGTAAACGTCGCATAGAAGAAATTCAAAT GCTATTTGAATCTTAACGAATATAGAAAAACTGCATGAATGACTTTCGACTAATGTAATA TATATATTTAAAGTACTGCATCTTAATAAATAATTATAGAACACATCTCTTTCATTTGTT GGGTGATTTATCTCTTATAGTTATACATCACCAGTATTGTGATCATCTTAGACGTCAAAA ACTGTCCTCGATGAAGAGTTCGCAGAAACTCAAATTGACGCGACCAGAATGAGAAAGTTG AAAAGTATCACAATAATACCAATACATGCAAACTTATAGTATGCAAAATTCGACTGGAGT TGCCTTTTAACTACAG
>CAGL0A03432g.cds ATGGATCAGAATGCAAACCAGAAGAAACGATTCTTTAAAGATGAACTCGAGTCGTCTATC GAAACCACTTTGACTGATAAATCATCTTTTCTATTTGAACCGCAGGTAGATGCGATTCAG GAAGAAAATGCAAATGATCCAGAAGAGCAAATTGCACAAGGTACACAGGAATCACCCTTT ATAGAGCAGCTAAGAGCAGTGTTGCCCACTATCCGGTTAGAAGTGGCCTTAGCACTTGAA GAAAAATATAGGGATATTGACGACGGGTTGGATCTGGCTATCTCAGAGTATTTTGACCAA TATCAAACCGGAAATGACGATGCACCACCATCGTCTTTGGAACTGCAACATTCCCAAGAA GTGTTGACGGTGCCTGATAATGAAGAGAAGGATACAGATCTTCAACTAGTAAGTGTGAAG AGGAAACGTGAGGACGATTTCATGCAGTCTAGTCAATCAAAAAAGCCCCAAAGGGCAAAC AGTAGTTGGAAAAAGTTTGTTGGATCACTACAAGTTACAGTGATGGTTACGAGACCTACA ATGAGACCTGTCCCATACGGGACACCACTTATCTTTAAAAGATCCAATAATAATGTGCCT TTAAAGAAAATTTACGAACAATTGAACAAGAAAAAGACAGGTCTTGCTGCATTTGTTAAG ATTTATAGTGCCAATGATGAAAGGGAAATTGGTAGAGTTCCCGAAGATATAGCTCGAATT GTTTTTCCTCTTCTTCATCGAAACGAAGTCCATTTTAAACTAACAATGATCTATCCTGGT GATAAGAGACTAAGCATAGGTGATAATATAATTATCCAAATGGACTCATTTCTAACCTCC ACACTGTTTAATCGCAAAGAAAATCCTACGTTTTCGACTCAAAATGGAAATGGGCGTGAA AGATTTGGAGCAATAGTGGAAACTGAACAGGAACTGGAAGAAAGAAATATAAGAATGGGT TTAATCATGTTATTCGATAAGATAAAATTAAGGCCAGTTAAAGATGAGGCCAAATTTTTA GAAAAGTTGAAACAAGATGGCGATGACAACGAAATAGTTGATCTGGAAGACGATGAGAGT TTTGGGAATTTCTTATCACAAGAACCTTTAAACGATGAGTTACCAACTCAGCATCAAGAA GATACGATGAATATCAATCAATTGACCTCCTTTTATAAAGCAACGCAATCTTCTAAACAA CTAAATAGCTTAATACCGACAACGCCTCCACCAGAGCTAGTTAAAGTGGAACTTCGCAAG TATCAAAAGCAAGGTTTAACTTGGATGTTGAGAAGAGAGGGTATTTCCATAGGCCATGAT AATGAAGATAAATCCGAAGATGATACTACACTTCTTAACCCCTTGTGGCGACAATTTCAG TGGCCCAGGAATATGTCATGGCATAATCAATCTACAGGGAGTGAAAATGACAATTCAAAT CCTAAGCTGATTTTCTTTTATGGGAATCTTCATACTGGTGAATTTTCTCTTGAGAGGCCA ACGATGAATTCTTTCAAGAATGGTGGTATATTGTCCGATGAGATGGGTTTAGGTAAAACT ATTTCAGCTCTATCATTAGTACTGATGAGACCAAAGGACGAACATACTACCAGTCAGTCA CTGTTTCACCAAGAGAGTTCTAATTTATCAAGTGATGATGTAATAGAAATCAAAGAACCG GAAAGATCATATGCTTACAAAACAACGCTAATCATTGTGCCGATGTCATTATTAACCCAG TGGCGTGATGAGTTTGACAAAGTCAATAATAATGCTGGATTAACGTGTGAGTTATATTAT GGAGGTAATGTGAGTAGTCTCAAAAGCTTACTGATCAAAAGAAAGAACCCACCAACTGTT GTTCTAACTACTTATGGTATTGTTCAGAATGAATGGACAAAGTTAAGTAAAGATGGAACA AATATCAGGTCTCTGGGACGAACTTCTGGTATTTTTTCTATCGAGTTTTTTAGGATAATT CTAGATGAGGGCCATACTATAAGAAATAAATCTACAATTACTTCTAAAGCGGTATTAGAA CTATCTTCAAAATATAGATGGATACTGACTGGTACCCCAATTATCAATAGACTGGATGAT TTATATTCTTTGGTAAAATTTTTGAAGTTAGAACCTTGGTCTCAGATCGGTTATTGGAAA CAATTCATTACAAATCCTTTCGAGGAACGAAATTTTAAGCAAGCATTTGATGTTGTTAAT GCTATTATGGAACCCGTATTACTAAGAAGAACAAAGCAGATGAAAGATACTGATGGAAAT CCTCTTGTTCAGCTACCTCCAAAGGAAATTGTTATTGAGAAATTACAATTATCTAAGAAA CAGAAATTAATATATGAAGAGTTTTTGCAAAGGGCAGAGAAAACATTCAGATCAGGTCTA CAATCAGGTGATCTCTTGAAAAAATATTCAACTATCCTGGTTCATATATTAAGACTTCGC CAAGTTTGTTGTGATTCAAATCTAATTGGAACCTTAGATGAAAATGATGAAGATTTGTCT TCAGGTAATAACAAGCTAATAACTGAATCAGTTGATGTAAAAACCCTAATACCAGATACA GAGGAGGAGGAAGATGAGGTACCTCCATTTGAAAATGACGAACTTGACAAATTGATTGAA TCTGTAGAGGCAAAATTTATTGATTCAAACCAACTGATACCTGTTGAGTGTTCTATATGT ACAGCGGAACCTATTGAGAGCTCGTCTGCGGTTGTTACAGAATGTGAGCATGTTTTTTGT AAGGAGTGTCTGGAGGAATATGGTAACTTCCAAAAAGAGAAAAGCTTGCAACAAAAGTGT CCTAACTGTAGGAGGGACATCAATTTAAATAGATGCCTAGCCTTTGAAAAAGGCTCTGAT GGAATTCTAAAGCTGATCCATTTTGACCGTAAGGAACGGCCTGCGAAGCTTAATGCCTTA ATAAGGCACTTACAACAGCTACAAGATAGTTCTGCCGGTGAGCAAGTAGTAGTATTTTCA CAATTCTCCTCATATTTAGATATATTGGAGTCACAACTAAACGAGGTCTATTCATCAAAT AAGTTGAAAGTTTACAAATTTGATGGTCGCCTGTCCTTAAAAGAGCGTACTGCGGTGCTA GAAGATTTCAAAGTCAAAGATTATGCAGTACAGAAGGTTTTGCTTCTATCATTAAAAGCT GGTGGTGTTGGGTTGAACTTGACCTGTGCGTCTTATGCATTTATGATGGACCCGTGGTGG TCGCCCAGTATGGAGGATCAAGCAATCGATAGAATTCATAGGATAGGGCAGACTAACAGT GTGAAAGTCATCAGATTTGTAATAGATGGCTCTATTGAAGAAAAAATGTTAAGGATCCAG GACCGTAAAAGAACGCTAGGTGAAGCCATGGATACTGATGAGGATGAGAGACGTAAACGT CGCATAGAAGAAATTCAAATGCTATTTGAATCTTAA
>CAGL0A03432g.aa MDQNANQKKRFFKDELESSIETTLTDKSSFLFEPQVDAIQEENANDPEEQIAQGTQESPF IEQLRAVLPTIRLEVALALEEKYRDIDDGLDLAISEYFDQYQTGNDDAPPSSLELQHSQE VLTVPDNEEKDTDLQLVSVKRKREDDFMQSSQSKKPQRANSSWKKFVGSLQVTVMVTRPT MRPVPYGTPLIFKRSNNNVPLKKIYEQLNKKKTGLAAFVKIYSANDEREIGRVPEDIARI VFPLLHRNEVHFKLTMIYPGDKRLSIGDNIIIQMDSFLTSTLFNRKENPTFSTQNGNGRE RFGAIVETEQELEERNIRMGLIMLFDKIKLRPVKDEAKFLEKLKQDGDDNEIVDLEDDES FGNFLSQEPLNDELPTQHQEDTMNINQLTSFYKATQSSKQLNSLIPTTPPPELVKVELRK YQKQGLTWMLRREGISIGHDNEDKSEDDTTLLNPLWRQFQWPRNMSWHNQSTGSENDNSN PKLIFFYGNLHTGEFSLERPTMNSFKNGGILSDEMGLGKTISALSLVLMRPKDEHTTSQS LFHQESSNLSSDDVIEIKEPERSYAYKTTLIIVPMSLLTQWRDEFDKVNNNAGLTCELYY GGNVSSLKSLLIKRKNPPTVVLTTYGIVQNEWTKLSKDGTNIRSLGRTSGIFSIEFFRII LDEGHTIRNKSTITSKAVLELSSKYRWILTGTPIINRLDDLYSLVKFLKLEPWSQIGYWK QFITNPFEERNFKQAFDVVNAIMEPVLLRRTKQMKDTDGNPLVQLPPKEIVIEKLQLSKK QKLIYEEFLQRAEKTFRSGLQSGDLLKKYSTILVHILRLRQVCCDSNLIGTLDENDEDLS SGNNKLITESVDVKTLIPDTEEEEDEVPPFENDELDKLIESVEAKFIDSNQLIPVECSIC TAEPIESSSAVVTECEHVFCKECLEEYGNFQKEKSLQQKCPNCRRDINLNRCLAFEKGSD GILKLIHFDRKERPAKLNALIRHLQQLQDSSAGEQVVVFSQFSSYLDILESQLNEVYSSN KLKVYKFDGRLSLKERTAVLEDFKVKDYAVQKVLLLSLKAGGVGLNLTCASYAFMMDPWW SPSMEDQAIDRIHRIGQTNSVKVIRFVIDGSIEEKMLRIQDRKRTLGEAMDTDEDERRKR RIEEIQMLFES*
Legend and notes
Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.
Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.
Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.
Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.
Sequences
| Color | Nucleotide sequence and Coding sequence | Predicted translation product |
| RED | start and stop codons | Initial methionine and sequence end |
| BLUE | coding sequence | protein sequence |
| grey | non-coding sequence (upstream, downstream or intron) | |
| grey | donor and acceptor splicing sites |
URL: http://www.genolevures.org/elt/CAGL/CAGL0A03432g